RNA–Protein interactions for RNA: ENST00000480468.1

SIK3-210, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 2,237 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-210ENST00000480468 CATIPQ7Z7H3 387 aa11.64□□□□□ -0.55
SIK3-210ENST00000480468 ERICH1Q86X53 443 aa11.64□□□□□ -0.55
SIK3-210ENST00000480468 DDX42Q86XP3 938 aaKnown RBP eCLIP11.64□□□□□ -0.55
SIK3-210ENST00000480468 DZIP3Q86Y13 1208 aaKnown RBP11.64□□□□□ -0.55
SIK3-210ENST00000480468 ESR2Q92731 530 aa11.64□□□□□ -0.55
SIK3-210ENST00000480468 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.64□□□□□ -0.55
SIK3-210ENST00000480468 ISCA1Q9BUE6 129 aa11.64□□□□□ -0.55
SIK3-210ENST00000480468 ECT2Q9H8V3 914 aa11.64□□□□□ -0.55
SIK3-210ENST00000480468 ABCF3Q9NUQ8 709 aa11.64□□□□□ -0.55
SIK3-210ENST00000480468 CTNNAL1Q9UBT7 734 aa11.64□□□□□ -0.55
SIK3-210ENST00000480468 PNMA2Q9UL42 364 aa11.64□□□□□ -0.55
SIK3-210ENST00000480468 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.64□□□□□ -0.55
SIK3-210ENST00000480468 SLC4A4Q9Y6R1 1079 aa11.64□□□□□ -0.55
SIK3-210ENST00000480468 RREB1Q92766 1687 aa11.63□□□□□ -0.55
SIK3-210ENST00000480468 GPR75-ASB3A0A0A6YYF3 556 aa11.63□□□□□ -0.55
SIK3-210ENST00000480468 CCDC169A6NNP5 214 aa11.63□□□□□ -0.55
SIK3-210ENST00000480468 O00370 1275 aa11.63□□□□□ -0.55
SIK3-210ENST00000480468 KCNK3O14649 394 aa11.63□□□□□ -0.55
SIK3-210ENST00000480468 SNX3O60493 162 aa11.63□□□□□ -0.55
SIK3-210ENST00000480468 DDAH1O94760 285 aa11.63□□□□□ -0.55
SIK3-210ENST00000480468 GCP02774 474 aa11.63□□□□□ -0.55
SIK3-210ENST00000480468 ZBTB48P10074 688 aaPredicted RBP11.63□□□□□ -0.55
SIK3-210ENST00000480468 FLT3P36888 993 aa11.63□□□□□ -0.55
SIK3-210ENST00000480468 UBA7P41226 1012 aa11.63□□□□□ -0.55
SIK3-210ENST00000480468 SKIV2L2P42285 1042 aaKnown RBP11.63□□□□□ -0.55
SIK3-210ENST00000480468 MSH2P43246 934 aa11.63□□□□□ -0.55
SIK3-210ENST00000480468 STK4Q13043 487 aa11.63□□□□□ -0.55
SIK3-210ENST00000480468 IFIT5Q13325 482 aaKnown RBP11.63□□□□□ -0.55
SIK3-210ENST00000480468 TAF11Q15544 211 aa11.63□□□□□ -0.55
SIK3-210ENST00000480468 TDRD12Q587J7 1177 aaKnown RBP11.63□□□□□ -0.55
SIK3-210ENST00000480468 C10orf76Q5T2E6 689 aa11.63□□□□□ -0.55
SIK3-210ENST00000480468 ASRGL1Q7L266 308 aa11.63□□□□□ -0.55
SIK3-210ENST00000480468 IFNL2Q8IZJ0 200 aa11.63□□□□□ -0.55
SIK3-210ENST00000480468 DCAF5Q96JK2 942 aa11.63□□□□□ -0.55
SIK3-210ENST00000480468 ELAC2Q9BQ52 826 aaKnown RBP11.63□□□□□ -0.55
SIK3-210ENST00000480468 TRIM9Q9C026 710 aa11.63□□□□□ -0.55
SIK3-210ENST00000480468 ADAM22Q9P0K1 906 aa11.63□□□□□ -0.55
SIK3-210ENST00000480468 ANAPC4Q9UJX5 808 aa11.63□□□□□ -0.55
SIK3-210ENST00000480468 ATP6V0A2Q9Y487 856 aa11.63□□□□□ -0.55
SIK3-210ENST00000480468 ASB3Q9Y575 518 aa11.63□□□□□ -0.55
SIK3-210ENST00000480468 ATP8B3O60423 1300 aa11.63□□□□□ -0.55
SIK3-210ENST00000480468 CNTNAP5Q8WYK1 1306 aa11.63□□□□□ -0.55
SIK3-210ENST00000480468 LAD1O00515 517 aa11.63□□□□□ -0.55
SIK3-210ENST00000480468 DAPK3O43293 454 aa11.63□□□□□ -0.55
SIK3-210ENST00000480468 EVI5O60447 810 aa11.63□□□□□ -0.55
SIK3-210ENST00000480468 CAND2O75155 1236 aa11.63□□□□□ -0.55
SIK3-210ENST00000480468 PLEKHA8P1O95397 391 aa11.63□□□□□ -0.55
SIK3-210ENST00000480468 AGTP01019 485 aa11.63□□□□□ -0.55
SIK3-210ENST00000480468 ITGA6P23229 1130 aa11.63□□□□□ -0.55
SIK3-210ENST00000480468 CALML3P27482 149 aa11.63□□□□□ -0.55
SIK3-210ENST00000480468 MAP3K12Q12852 859 aa11.63□□□□□ -0.55
SIK3-210ENST00000480468 SFMBT2Q5VUG0 894 aa11.63□□□□□ -0.55
SIK3-210ENST00000480468 TMC4Q7Z404 712 aa11.63□□□□□ -0.55
SIK3-210ENST00000480468 COL23A1Q86Y22 540 aaPredicted RBP11.63□□□□□ -0.55
SIK3-210ENST00000480468 RASGEF1CQ8N431 466 aa11.63□□□□□ -0.55
SIK3-210ENST00000480468 RAPGEF4Q8WZA2 1011 aa11.63□□□□□ -0.55
SIK3-210ENST00000480468 KLHL29Q96CT2 875 aa11.63□□□□□ -0.55
SIK3-210ENST00000480468 SEMA6BQ9H3T3 888 aa11.63□□□□□ -0.55
SIK3-210ENST00000480468 ARMT1Q9H993 441 aa11.63□□□□□ -0.55
SIK3-210ENST00000480468 INTS9Q9NV88 658 aaKnown RBP11.63□□□□□ -0.55
SIK3-210ENST00000480468 USP15Q9Y4E8 981 aaPredicted RBP11.63□□□□□ -0.55
SIK3-210ENST00000480468 LRRD1A4D1F6 860 aa11.62□□□□□ -0.55
SIK3-210ENST00000480468 NKRFO15226 690 aaKnown RBP eCLIP11.62□□□□□ -0.55
SIK3-210ENST00000480468 TLR2O60603 784 aa11.62□□□□□ -0.55
SIK3-210ENST00000480468 ZPR1O75312 459 aa11.62□□□□□ -0.55
SIK3-210ENST00000480468 GNAT1P11488 350 aa11.62□□□□□ -0.55
SIK3-210ENST00000480468 DNA2P51530 1060 aa11.62□□□□□ -0.55
SIK3-210ENST00000480468 NLRP5P59047 1200 aa11.62□□□□□ -0.55
SIK3-210ENST00000480468 TROAPQ12815 778 aa11.62□□□□□ -0.55
SIK3-210ENST00000480468 TRIM28Q13263 835 aaKnown RBP11.62□□□□□ -0.55
SIK3-210ENST00000480468 CCDC178Q5BJE1 867 aa11.62□□□□□ -0.55
SIK3-210ENST00000480468 LMNTD2Q8IXW0 634 aa11.62□□□□□ -0.55
SIK3-210ENST00000480468 SPICE1Q8N0Z3 855 aa11.62□□□□□ -0.55
SIK3-210ENST00000480468 VGLL2Q8N8G2 317 aa11.62□□□□□ -0.55
SIK3-210ENST00000480468 ENAHQ8N8S7 591 aaPredicted RBP11.62□□□□□ -0.55
SIK3-210ENST00000480468 TTLL11Q8NHH1 800 aa11.62□□□□□ -0.55
SIK3-210ENST00000480468 TMEM109Q9BVC6 243 aa11.62□□□□□ -0.55
SIK3-210ENST00000480468 STMN4Q9H169 189 aaPredicted RBP11.62□□□□□ -0.55
SIK3-210ENST00000480468 RGL1Q9NZL6 768 aa11.62□□□□□ -0.55
SIK3-210ENST00000480468 BCL9O00512 1426 aa11.62□□□□□ -0.55
SIK3-210ENST00000480468 DLEC1Q9Y238 1755 aa11.62□□□□□ -0.55
SIK3-210ENST00000480468 CEP104O60308 925 aa11.62□□□□□ -0.55
SIK3-210ENST00000480468 KRT16P08779 473 aa11.62□□□□□ -0.55
SIK3-210ENST00000480468 SCG2P13521 617 aa11.62□□□□□ -0.55
SIK3-210ENST00000480468 CDC25CP30307 473 aa11.62□□□□□ -0.55
SIK3-210ENST00000480468 RNASE9P60153 205 aaKnown RBP11.62□□□□□ -0.55
SIK3-210ENST00000480468 LRRC63Q05C16 580 aa11.62□□□□□ -0.55
SIK3-210ENST00000480468 SNX1Q13596 522 aa11.62□□□□□ -0.55
SIK3-210ENST00000480468 APBB1IPQ7Z5R6 666 aaPredicted RBP11.62□□□□□ -0.55
SIK3-210ENST00000480468 EEF2KMTQ96G04 330 aa11.62□□□□□ -0.55
SIK3-210ENST00000480468 AK8Q96MA6 479 aa11.62□□□□□ -0.55
SIK3-210ENST00000480468 ZSCAN10Q96SZ4 725 aaPredicted RBP11.62□□□□□ -0.55
SIK3-210ENST00000480468 IRAK4Q9NWZ3 460 aa11.62□□□□□ -0.55
SIK3-210ENST00000480468 PACSIN2Q9UNF0 486 aaPredicted RBP11.62□□□□□ -0.55
SIK3-210ENST00000480468 UTP11Q9Y3A2 253 aaKnown RBP11.62□□□□□ -0.55
SIK3-210ENST00000480468 NOC2LQ9Y3T9 749 aaKnown RBP11.62□□□□□ -0.55
SIK3-210ENST00000480468 hCG_1642624A0A1W2PR95 340 aa11.61□□□□□ -0.55
SIK3-210ENST00000480468 DPPA5A6NC42 116 aa11.61□□□□□ -0.55
SIK3-210ENST00000480468 SMIM24O75264 130 aa11.61□□□□□ -0.55
SIK3-210ENST00000480468 SUN1O94901 812 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms