RNA–Protein interactions for RNA: ENST00000479598.5

SLC40A1-207, Transcript of solute carrier family 40 member 1, humanhuman

TSL 1 (best)

Gene SLC40A1, Length 993 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC40A1-207ENST00000479598 SPATA20Q8TB22 786 aa11.22□□□□□ -0.61
SLC40A1-207ENST00000479598 CNTNAP5Q8WYK1 1306 aa11.22□□□□□ -0.61
SLC40A1-207ENST00000479598 TBC1D5Q92609 795 aa11.22□□□□□ -0.61
SLC40A1-207ENST00000479598 GDF15Q99988 308 aa11.22□□□□□ -0.61
SLC40A1-207ENST00000479598 PHF20Q9BVI0 1012 aa11.22□□□□□ -0.61
SLC40A1-207ENST00000479598 CYP39A1Q9NYL5 469 aa11.22□□□□□ -0.61
SLC40A1-207ENST00000479598 MRPL11Q9Y3B7 192 aaKnown RBP11.22□□□□□ -0.61
SLC40A1-207ENST00000479598 PCDHB6Q9Y5E3 794 aa11.22□□□□□ -0.61
SLC40A1-207ENST00000479598 PCDHA1Q9Y5I3 950 aa11.22□□□□□ -0.61
SLC40A1-207ENST00000479598 V9GY48 417 aaPredicted RBP11.22□□□□□ -0.61
SLC40A1-207ENST00000479598 SLU7O95391 586 aaKnown RBP11.21□□□□□ -0.61
SLC40A1-207ENST00000479598 CYBAP13498 195 aa11.21□□□□□ -0.61
SLC40A1-207ENST00000479598 KRT2P35908 639 aa11.21□□□□□ -0.61
SLC40A1-207ENST00000479598 AKAP17AQ02040 695 aaKnown RBP11.21□□□□□ -0.61
SLC40A1-207ENST00000479598 CNTN2Q02246 1040 aa11.21□□□□□ -0.61
SLC40A1-207ENST00000479598 GRIN1Q05586 938 aa11.21□□□□□ -0.61
SLC40A1-207ENST00000479598 TRAF1Q13077 416 aa11.21□□□□□ -0.61
SLC40A1-207ENST00000479598 NR5A1Q13285 461 aa11.21□□□□□ -0.61
SLC40A1-207ENST00000479598 BAATQ14032 418 aaPredicted RBP11.21□□□□□ -0.61
SLC40A1-207ENST00000479598 SH3RF1Q7Z6J0 888 aa11.21□□□□□ -0.61
SLC40A1-207ENST00000479598 FAM133AQ8N9E0 248 aa11.21□□□□□ -0.61
SLC40A1-207ENST00000479598 ARRDC4Q8NCT1 418 aa11.21□□□□□ -0.61
SLC40A1-207ENST00000479598 ZNF397Q8NF99 534 aaPredicted RBP11.21□□□□□ -0.61
SLC40A1-207ENST00000479598 OXER1Q8TDS5 423 aa11.21□□□□□ -0.61
SLC40A1-207ENST00000479598 TNFRSF25Q93038 417 aa11.21□□□□□ -0.61
SLC40A1-207ENST00000479598 SMARCE1Q969G3 411 aa11.21□□□□□ -0.61
SLC40A1-207ENST00000479598 INTS13Q9NVM9 706 aa11.21□□□□□ -0.61
SLC40A1-207ENST00000479598 TRMT1Q9NXH9 659 aaKnown RBP11.21□□□□□ -0.61
SLC40A1-207ENST00000479598 SEC63Q9UGP8 760 aaKnown RBP11.21□□□□□ -0.61
SLC40A1-207ENST00000479598 SERTAD1Q9UHV2 236 aa11.21□□□□□ -0.61
SLC40A1-207ENST00000479598 DIS3Q9Y2L1 958 aaKnown RBP11.21□□□□□ -0.61
SLC40A1-207ENST00000479598 SOWAHBA6NEL2 793 aa11.2□□□□□ -0.62
SLC40A1-207ENST00000479598 POTEB2H3BUK9 544 aa11.2□□□□□ -0.62
SLC40A1-207ENST00000479598 DNM1LO00429 736 aa11.2□□□□□ -0.62
SLC40A1-207ENST00000479598 OPLAHO14841 1288 aa11.2□□□□□ -0.62
SLC40A1-207ENST00000479598 SEPT4O43236 478 aa11.2□□□□□ -0.62
SLC40A1-207ENST00000479598 SERPINC1P01008 464 aa11.2□□□□□ -0.62
SLC40A1-207ENST00000479598 PRR29P0C7W0 189 aa11.2□□□□□ -0.62
SLC40A1-207ENST00000479598 ERCC5P28715 1186 aaPredicted RBP11.2□□□□□ -0.62
SLC40A1-207ENST00000479598 LRRC26Q2I0M4 334 aa11.2□□□□□ -0.62
SLC40A1-207ENST00000479598 ISM2Q6H9L7 571 aa11.2□□□□□ -0.62
SLC40A1-207ENST00000479598 SLC30A10Q6XR72 485 aa11.2□□□□□ -0.62
SLC40A1-207ENST00000479598 RNF207Q6ZRF8 634 aa11.2□□□□□ -0.62
SLC40A1-207ENST00000479598 ZNF592Q92610 1267 aa11.2□□□□□ -0.62
SLC40A1-207ENST00000479598 FERMT2Q96AC1 680 aa11.2□□□□□ -0.62
SLC40A1-207ENST00000479598 CCDC34Q96HJ3 373 aa11.2□□□□□ -0.62
SLC40A1-207ENST00000479598 MAML3Q96JK9 1138 aa11.2□□□□□ -0.62
SLC40A1-207ENST00000479598 FGD4Q96M96 766 aa11.2□□□□□ -0.62
SLC40A1-207ENST00000479598 PURBQ96QR8 312 aaKnown RBP11.2□□□□□ -0.62
SLC40A1-207ENST00000479598 SENP6Q9GZR1 1112 aaPredicted RBP11.2□□□□□ -0.62
SLC40A1-207ENST00000479598 MAF1Q9H063 256 aa11.2□□□□□ -0.62
SLC40A1-207ENST00000479598 FANCLQ9NW38 375 aa11.2□□□□□ -0.62
SLC40A1-207ENST00000479598 ZNF215Q9UL58 517 aaPredicted RBP11.2□□□□□ -0.62
SLC40A1-207ENST00000479598 ZMYND8Q9ULU4 1186 aaPredicted RBP11.2□□□□□ -0.62
SLC40A1-207ENST00000479598 LTBP2Q14767 1821 aa11.19□□□□□ -0.62
SLC40A1-207ENST00000479598 POLR2DO15514 142 aaKnown RBP11.19□□□□□ -0.62
SLC40A1-207ENST00000479598 SYN1P17600 705 aa11.19□□□□□ -0.62
SLC40A1-207ENST00000479598 ETF1P62495 437 aaKnown RBP11.19□□□□□ -0.62
SLC40A1-207ENST00000479598 RPS6P62753 249 aaKnown RBP11.19□□□□□ -0.62
SLC40A1-207ENST00000479598 GHRHRQ02643 423 aa11.19□□□□□ -0.62
SLC40A1-207ENST00000479598 NPY5RQ15761 445 aa11.19□□□□□ -0.62
SLC40A1-207ENST00000479598 MCF2L2Q86YR7 1114 aa11.19□□□□□ -0.62
SLC40A1-207ENST00000479598 TMEM139Q8IV31 216 aa11.19□□□□□ -0.62
SLC40A1-207ENST00000479598 SPOCK2Q92563 424 aa11.19□□□□□ -0.62
SLC40A1-207ENST00000479598 GPKOWQ92917 476 aaPredicted RBP eCLIP11.19□□□□□ -0.62
SLC40A1-207ENST00000479598 CSRNP2Q9H175 543 aa11.19□□□□□ -0.62
SLC40A1-207ENST00000479598 BRMS1Q9HCU9 246 aa11.19□□□□□ -0.62
SLC40A1-207ENST00000479598 OGFRQ9NZT2 677 aa11.19□□□□□ -0.62
SLC40A1-207ENST00000479598 ASTN1O14525 1302 aa11.18□□□□□ -0.62
SLC40A1-207ENST00000479598 GOLGA6L9A6NEM1 432 aa11.18□□□□□ -0.62
SLC40A1-207ENST00000479598 ARHGAP6O43182 974 aa11.18□□□□□ -0.62
SLC40A1-207ENST00000479598 CFBP00751 764 aa11.18□□□□□ -0.62
SLC40A1-207ENST00000479598 SLFN14P0C7P3 912 aa11.18□□□□□ -0.62
SLC40A1-207ENST00000479598 CALML3P27482 149 aa11.18□□□□□ -0.62
SLC40A1-207ENST00000479598 MAGEA10P43363 369 aaPredicted RBP11.18□□□□□ -0.62
SLC40A1-207ENST00000479598 TRAPPC10P48553 1259 aa11.18□□□□□ -0.62
SLC40A1-207ENST00000479598 PFKFB3Q16875 520 aaPredicted RBP11.18□□□□□ -0.62
SLC40A1-207ENST00000479598 PRAMEF19Q5SWL8 479 aa11.18□□□□□ -0.62
SLC40A1-207ENST00000479598 UTP14CQ5TAP6 766 aaKnown RBP11.18□□□□□ -0.62
SLC40A1-207ENST00000479598 WWC2Q6AWC2 1192 aa11.18□□□□□ -0.62
SLC40A1-207ENST00000479598 TYW1BQ6NUM6 668 aa11.18□□□□□ -0.62
SLC40A1-207ENST00000479598 HEATR3Q7Z4Q2 680 aa11.18□□□□□ -0.62
SLC40A1-207ENST00000479598 ZNF467Q7Z7K2 595 aaPredicted RBP11.18□□□□□ -0.62
SLC40A1-207ENST00000479598 REXO1L1PQ8IX06 675 aa11.18□□□□□ -0.62
SLC40A1-207ENST00000479598 SAMD3Q8N6K7 520 aa11.18□□□□□ -0.62
SLC40A1-207ENST00000479598 SYTL5Q8TDW5 730 aaPredicted RBP11.18□□□□□ -0.62
SLC40A1-207ENST00000479598 TINF2Q9BSI4 451 aa11.18□□□□□ -0.62
SLC40A1-207ENST00000479598 VPS54Q9P1Q0 977 aa11.18□□□□□ -0.62
SLC40A1-207ENST00000479598 COL20A1Q9P218 1284 aa11.18□□□□□ -0.62
SLC40A1-207ENST00000479598 DDX41Q9UJV9 622 aaKnown RBP11.18□□□□□ -0.62
SLC40A1-207ENST00000479598 LAMA3Q16787 3333 aa11.18□□□□□ -0.62
SLC40A1-207ENST00000479598 A0A1B0GTH6 734 aa11.17□□□□□ -0.62
SLC40A1-207ENST00000479598 FAM205CA6NFA0 338 aa11.17□□□□□ -0.62
SLC40A1-207ENST00000479598 KBTBD13C9JR72 458 aa11.17□□□□□ -0.62
SLC40A1-207ENST00000479598 STXBP3O00186 592 aa11.17□□□□□ -0.62
SLC40A1-207ENST00000479598 ZSCAN12O43309 604 aa11.17□□□□□ -0.62
SLC40A1-207ENST00000479598 SCG2P13521 617 aa11.17□□□□□ -0.62
SLC40A1-207ENST00000479598 HOXA13P31271 388 aaPredicted RBP11.17□□□□□ -0.62
SLC40A1-207ENST00000479598 HSD17B4P51659 736 aa11.17□□□□□ -0.62
SLC40A1-207ENST00000479598 ATP2C1P98194 919 aaPredicted RBP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms