RNA–Protein interactions for RNA: ENST00000479530.5

PDZRN3-208, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-208ENST00000479530 CXorf56Q9H5V9 222 aa14.64□□□□□ -0.07
PDZRN3-208ENST00000479530 PPANQ9NQ55 473 aaKnown RBP14.64□□□□□ -0.07
PDZRN3-208ENST00000479530 BACH1O14867 736 aa14.64□□□□□ -0.07
PDZRN3-208ENST00000479530 RAD51CO43502 376 aa14.64□□□□□ -0.07
PDZRN3-208ENST00000479530 MAP2K2P36507 400 aa14.64□□□□□ -0.07
PDZRN3-208ENST00000479530 MDH1P40925 334 aaKnown RBP14.64□□□□□ -0.07
PDZRN3-208ENST00000479530 NOVP48745 357 aa14.64□□□□□ -0.07
PDZRN3-208ENST00000479530 CACNB3P54284 484 aa14.64□□□□□ -0.07
PDZRN3-208ENST00000479530 GABPAQ06546 454 aa14.64□□□□□ -0.07
PDZRN3-208ENST00000479530 EHHADHQ08426 723 aa14.64□□□□□ -0.07
PDZRN3-208ENST00000479530 PAK2Q13177 524 aa14.64□□□□□ -0.07
PDZRN3-208ENST00000479530 ITGB3BPQ13352 177 aaPredicted RBP14.64□□□□□ -0.07
PDZRN3-208ENST00000479530 ENOX2Q16206 610 aaKnown RBP14.64□□□□□ -0.07
PDZRN3-208ENST00000479530 MAN2A1Q16706 1144 aa14.64□□□□□ -0.07
PDZRN3-208ENST00000479530 GLE1Q53GS7 698 aaKnown RBP14.64□□□□□ -0.07
PDZRN3-208ENST00000479530 CEP85LQ5SZL2 805 aa14.64□□□□□ -0.07
PDZRN3-208ENST00000479530 CNNM4Q6P4Q7 775 aa14.64□□□□□ -0.07
PDZRN3-208ENST00000479530 CACNA2D4Q7Z3S7 1137 aa14.64□□□□□ -0.07
PDZRN3-208ENST00000479530 DNAAF5Q86Y56 855 aa14.64□□□□□ -0.07
PDZRN3-208ENST00000479530 KLHL7Q8IXQ5 586 aa14.64□□□□□ -0.07
PDZRN3-208ENST00000479530 CERKQ8TCT0 537 aa14.64□□□□□ -0.07
PDZRN3-208ENST00000479530 ATP6V1G3Q96LB4 118 aa14.64□□□□□ -0.07
PDZRN3-208ENST00000479530 AK8Q96MA6 479 aa14.64□□□□□ -0.07
PDZRN3-208ENST00000479530 FGFBP2Q9BYJ0 223 aa14.64□□□□□ -0.07
PDZRN3-208ENST00000479530 GOLPH3Q9H4A6 298 aa14.64□□□□□ -0.07
PDZRN3-208ENST00000479530 JMJD4Q9H9V9 463 aa14.64□□□□□ -0.07
PDZRN3-208ENST00000479530 ZNF287Q9HBT7 754 aa14.64□□□□□ -0.07
PDZRN3-208ENST00000479530 PLAAQ9Y263 795 aa14.64□□□□□ -0.07
PDZRN3-208ENST00000479530 MAST2Q6P0Q8 1798 aa14.64□□□□□ -0.07
PDZRN3-208ENST00000479530 ZNF831Q5JPB2 1677 aa14.64□□□□□ -0.07
PDZRN3-208ENST00000479530 ATXN2Q99700 1313 aaKnown RBP14.63□□□□□ -0.07
PDZRN3-208ENST00000479530 E7EVH7 732 aa14.63□□□□□ -0.07
PDZRN3-208ENST00000479530 ARID5AQ03989 594 aa14.63□□□□□ -0.07
PDZRN3-208ENST00000479530 NFIAQ12857 509 aa14.63□□□□□ -0.07
PDZRN3-208ENST00000479530 LRRC55Q6ZSA7 311 aa14.63□□□□□ -0.07
PDZRN3-208ENST00000479530 MAATS1Q7Z4T9 603 aa14.63□□□□□ -0.07
PDZRN3-208ENST00000479530 ADGRF4Q8IZF3 695 aa14.63□□□□□ -0.07
PDZRN3-208ENST00000479530 CCDC47Q96A33 483 aaKnown RBP14.63□□□□□ -0.07
PDZRN3-208ENST00000479530 RBM17Q96I25 401 aaKnown RBP14.63□□□□□ -0.07
PDZRN3-208ENST00000479530 RAD21O60216 631 aa14.63□□□□□ -0.07
PDZRN3-208ENST00000479530 SF3B2Q13435 895 aaKnown RBP14.63□□□□□ -0.07
PDZRN3-208ENST00000479530 TANGO6Q9C0B7 1094 aa14.63□□□□□ -0.07
PDZRN3-208ENST00000479530 CUEDC2Q9H467 287 aa14.63□□□□□ -0.07
PDZRN3-208ENST00000479530 USP17L10C9JJH3 530 aa14.62□□□□□ -0.07
PDZRN3-208ENST00000479530 NOL4O94818 638 aa14.62□□□□□ -0.07
PDZRN3-208ENST00000479530 CCDC84Q86UT8 332 aaPredicted RBP14.62□□□□□ -0.07
PDZRN3-208ENST00000479530 DDX42Q86XP3 938 aaKnown RBP eCLIP14.62□□□□□ -0.07
PDZRN3-208ENST00000479530 CCDC13Q8IYE1 715 aa14.62□□□□□ -0.07
PDZRN3-208ENST00000479530 INPP4AQ96PE3 977 aaPredicted RBP14.62□□□□□ -0.07
PDZRN3-208ENST00000479530 TBC1D7Q9P0N9 293 aa14.62□□□□□ -0.07
PDZRN3-208ENST00000479530 TAL1P17542 331 aaPredicted RBP14.62□□□□□ -0.07
PDZRN3-208ENST00000479530 IBSPP21815 317 aaPredicted RBP14.62□□□□□ -0.07
PDZRN3-208ENST00000479530 ADCY7P51828 1080 aa14.62□□□□□ -0.07
PDZRN3-208ENST00000479530 SV2BQ7L1I2 683 aa14.62□□□□□ -0.07
PDZRN3-208ENST00000479530 MREGQ8N565 214 aa14.62□□□□□ -0.07
PDZRN3-208ENST00000479530 HAS1Q92839 578 aa14.62□□□□□ -0.07
PDZRN3-208ENST00000479530 CALML4Q96GE6 196 aa14.62□□□□□ -0.07
PDZRN3-208ENST00000479530 ECHS1P30084 290 aa14.62□□□□□ -0.07
PDZRN3-208ENST00000479530 USP8P40818 1118 aa14.62□□□□□ -0.07
PDZRN3-208ENST00000479530 SNAP25P60880 206 aa14.62□□□□□ -0.07
PDZRN3-208ENST00000479530 ERVK-9P63128 1117 aa14.62□□□□□ -0.07
PDZRN3-208ENST00000479530 CACNB1Q02641 598 aaPredicted RBP14.62□□□□□ -0.07
PDZRN3-208ENST00000479530 EMC10Q5UCC4 262 aa14.62□□□□□ -0.07
PDZRN3-208ENST00000479530 CD302Q8IX05 232 aa14.62□□□□□ -0.07
PDZRN3-208ENST00000479530 RNF10Q8N5U6 811 aaKnown RBP14.62□□□□□ -0.07
PDZRN3-208ENST00000479530 TBC1D5Q92609 795 aa14.62□□□□□ -0.07
PDZRN3-208ENST00000479530 GJD4Q96KN9 370 aaPredicted RBP14.62□□□□□ -0.07
PDZRN3-208ENST00000479530 MAGEF1Q9HAY2 307 aa14.62□□□□□ -0.07
PDZRN3-208ENST00000479530 USP40Q9NVE5 1235 aa14.62□□□□□ -0.07
PDZRN3-208ENST00000479530 BCCIPQ9P287 314 aaKnown RBP eCLIP14.62□□□□□ -0.07
PDZRN3-208ENST00000479530 NAV1Q8NEY1 1877 aa14.61□□□□□ -0.07
PDZRN3-208ENST00000479530 A0A087X0T9 212 aa14.61□□□□□ -0.07
PDZRN3-208ENST00000479530 A6NNZ2 444 aa14.61□□□□□ -0.07
PDZRN3-208ENST00000479530 MPHOSPH10O00566 681 aaKnown RBP14.61□□□□□ -0.07
PDZRN3-208ENST00000479530 BBOX1O75936 387 aa14.61□□□□□ -0.07
PDZRN3-208ENST00000479530 FAM107AO95990 144 aa14.61□□□□□ -0.07
PDZRN3-208ENST00000479530 FAM228BP0C875 321 aa14.61□□□□□ -0.07
PDZRN3-208ENST00000479530 PLCG2P16885 1265 aa14.61□□□□□ -0.07
PDZRN3-208ENST00000479530 TMOD1P28289 359 aa14.61□□□□□ -0.07
PDZRN3-208ENST00000479530 SHMT1P34896 483 aa14.61□□□□□ -0.07
PDZRN3-208ENST00000479530 SEMA3FQ13275 785 aa14.61□□□□□ -0.07
PDZRN3-208ENST00000479530 UAP1Q16222 522 aaPredicted RBP14.61□□□□□ -0.07
PDZRN3-208ENST00000479530 CDC37Q16543 378 aaPredicted RBP14.61□□□□□ -0.07
PDZRN3-208ENST00000479530 QPCTQ16769 361 aa14.61□□□□□ -0.07
PDZRN3-208ENST00000479530 TUBB8Q3ZCM7 444 aa14.61□□□□□ -0.07
PDZRN3-208ENST00000479530 SEPT12Q8IYM1 358 aa14.61□□□□□ -0.07
PDZRN3-208ENST00000479530 SNX29Q8TEQ0 813 aa14.61□□□□□ -0.07
PDZRN3-208ENST00000479530 LARP4BQ92615 738 aaKnown RBP14.61□□□□□ -0.07
PDZRN3-208ENST00000479530 DDX12PQ92771 950 aa14.61□□□□□ -0.07
PDZRN3-208ENST00000479530 ZKSCAN4Q969J2 545 aaPredicted RBP14.61□□□□□ -0.07
PDZRN3-208ENST00000479530 PAGR1Q9BTK6 254 aa14.61□□□□□ -0.07
PDZRN3-208ENST00000479530 VCPKMTQ9H867 229 aa14.61□□□□□ -0.07
PDZRN3-208ENST00000479530 IGKV6D-41A0A0C4DH26 115 aa14.61□□□□□ -0.07
PDZRN3-208ENST00000479530 NPHP3-ACAD11A0A0J9YXS1 232 aa14.61□□□□□ -0.07
PDZRN3-208ENST00000479530 USP17L15C9J2P7 530 aa14.61□□□□□ -0.07
PDZRN3-208ENST00000479530 USP17L13C9JLJ4 530 aa14.61□□□□□ -0.07
PDZRN3-208ENST00000479530 USP17L11C9JVI0 530 aa14.61□□□□□ -0.07
PDZRN3-208ENST00000479530 USP17L18D6R9N7 530 aa14.61□□□□□ -0.07
PDZRN3-208ENST00000479530 USP17L22D6RA61 530 aa14.61□□□□□ -0.07
PDZRN3-208ENST00000479530 USP17L17D6RBQ6 530 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms