RNA–Protein interactions for RNA: ENST00000479135.5

EWSR1-216, Transcript of EWS RNA binding protein 1, humanhuman

TSL 1 (best)

Gene EWSR1, Length 7,285 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-216ENST00000479135 INTS13Q9NVM9 706 aa11.81□□□□□ -0.52
EWSR1-216ENST00000479135 XRCC5P13010 732 aaKnown RBP11.81□□□□□ -0.52
EWSR1-216ENST00000479135 ITGB3BPQ13352 177 aaPredicted RBP11.81□□□□□ -0.52
EWSR1-216ENST00000479135 KLHL40Q2TBA0 621 aa11.81□□□□□ -0.52
EWSR1-216ENST00000479135 SENP1Q9P0U3 644 aa11.81□□□□□ -0.52
EWSR1-216ENST00000479135 VAV3Q9UKW4 847 aa11.81□□□□□ -0.52
EWSR1-216ENST00000479135 TTF2Q9UNY4 1162 aaKnown RBP11.81□□□□□ -0.52
EWSR1-216ENST00000479135 GUCY1B2O75343 617 aa11.81□□□□□ -0.52
EWSR1-216ENST00000479135 ELAC2Q9BQ52 826 aaKnown RBP11.81□□□□□ -0.52
EWSR1-216ENST00000479135 PAIP1Q9H074 479 aaKnown RBP11.81□□□□□ -0.52
EWSR1-216ENST00000479135 BCL2L12Q9HB09 334 aa11.81□□□□□ -0.52
EWSR1-216ENST00000479135 CCDC151A5D8V7 595 aa11.81□□□□□ -0.52
EWSR1-216ENST00000479135 FANCCQ00597 558 aa11.81□□□□□ -0.52
EWSR1-216ENST00000479135 RNF19BQ6ZMZ0 732 aa11.81□□□□□ -0.52
EWSR1-216ENST00000479135 GALNT4Q8N4A0 578 aa11.81□□□□□ -0.52
EWSR1-216ENST00000479135 ZBTB18Q99592 522 aa11.81□□□□□ -0.52
EWSR1-216ENST00000479135 PARNO95453 639 aaKnown RBP11.81□□□□□ -0.52
EWSR1-216ENST00000479135 CCT3P49368 545 aaKnown RBP11.81□□□□□ -0.52
EWSR1-216ENST00000479135 TUBB4BP68371 445 aa11.81□□□□□ -0.52
EWSR1-216ENST00000479135 SLC7A5Q01650 507 aa11.81□□□□□ -0.52
EWSR1-216ENST00000479135 IFNEQ86WN2 208 aa11.81□□□□□ -0.52
EWSR1-216ENST00000479135 NUDCD1Q96RS6 583 aa11.8□□□□□ -0.52
EWSR1-216ENST00000479135 TSKSQ9UJT2 592 aa11.8□□□□□ -0.52
EWSR1-216ENST00000479135 MFN2O95140 757 aa11.8□□□□□ -0.52
EWSR1-216ENST00000479135 DRP2Q13474 957 aa11.8□□□□□ -0.52
EWSR1-216ENST00000479135 OCLNQ16625 522 aa11.8□□□□□ -0.52
EWSR1-216ENST00000479135 COLGALT2Q8IYK4 626 aa11.8□□□□□ -0.52
EWSR1-216ENST00000479135 RNF123Q5XPI4 1314 aa11.8□□□□□ -0.52
EWSR1-216ENST00000479135 GPRASP1Q5JY77 1395 aa11.8□□□□□ -0.52
EWSR1-216ENST00000479135 CTNND1O60716 968 aaKnown RBP11.8□□□□□ -0.52
EWSR1-216ENST00000479135 CHGBP05060 677 aa11.8□□□□□ -0.52
EWSR1-216ENST00000479135 BCRP11274 1271 aa11.8□□□□□ -0.52
EWSR1-216ENST00000479135 MYBPC2Q14324 1141 aa11.8□□□□□ -0.52
EWSR1-216ENST00000479135 MESDQ14696 234 aa11.8□□□□□ -0.52
EWSR1-216ENST00000479135 CPXCR1Q8N123 301 aa11.8□□□□□ -0.52
EWSR1-216ENST00000479135 DTX3LQ8TDB6 740 aa11.8□□□□□ -0.52
EWSR1-216ENST00000479135 EEF2KMTQ96G04 330 aa11.8□□□□□ -0.52
EWSR1-216ENST00000479135 CYLDQ9NQC7 956 aa11.8□□□□□ -0.52
EWSR1-216ENST00000479135 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.8□□□□□ -0.52
EWSR1-216ENST00000479135 hCG_1642624A0A1W2PR95 340 aa11.8□□□□□ -0.52
EWSR1-216ENST00000479135 PDE3AQ14432 1141 aa11.8□□□□□ -0.52
EWSR1-216ENST00000479135 SULT1C3Q6IMI6 304 aa11.8□□□□□ -0.52
EWSR1-216ENST00000479135 IPCEF1Q8WWN9 437 aaPredicted RBP11.8□□□□□ -0.52
EWSR1-216ENST00000479135 NELFBQ8WX92 580 aa11.8□□□□□ -0.52
EWSR1-216ENST00000479135 TTC25Q96NG3 672 aa11.8□□□□□ -0.52
EWSR1-216ENST00000479135 MIS12Q9H081 205 aa11.8□□□□□ -0.52
EWSR1-216ENST00000479135 C8orf4Q9NR00 106 aa11.8□□□□□ -0.52
EWSR1-216ENST00000479135 RFX3P48380 749 aa11.8□□□□□ -0.52
EWSR1-216ENST00000479135 SERPINB10P48595 397 aa11.8□□□□□ -0.52
EWSR1-216ENST00000479135 SCRN3Q0VDG4 424 aa11.8□□□□□ -0.52
EWSR1-216ENST00000479135 MYO1EQ12965 1108 aa11.8□□□□□ -0.52
EWSR1-216ENST00000479135 LRRC49Q8IUZ0 686 aa11.8□□□□□ -0.52
EWSR1-216ENST00000479135 EHD2Q9NZN4 543 aa11.8□□□□□ -0.52
EWSR1-216ENST00000479135 SELENONQ9NZV5 590 aa11.8□□□□□ -0.52
EWSR1-216ENST00000479135 F13A1P00488 732 aa11.79□□□□□ -0.52
EWSR1-216ENST00000479135 HSPA8P11142 646 aaKnown RBP11.79□□□□□ -0.52
EWSR1-216ENST00000479135 ITPRIPL1Q6GPH6 555 aa11.79□□□□□ -0.52
EWSR1-216ENST00000479135 ALKBH2Q6NS38 261 aa11.79□□□□□ -0.52
EWSR1-216ENST00000479135 KLHL17Q6TDP4 642 aa11.79□□□□□ -0.52
EWSR1-216ENST00000479135 CHSY1Q86X52 802 aa11.79□□□□□ -0.52
EWSR1-216ENST00000479135 C10orf53Q8N6V4 93 aa11.79□□□□□ -0.52
EWSR1-216ENST00000479135 GRK7Q8WTQ7 553 aa11.79□□□□□ -0.52
EWSR1-216ENST00000479135 KIF2CQ99661 725 aa11.79□□□□□ -0.52
EWSR1-216ENST00000479135 PHF8Q9UPP1 1060 aa11.79□□□□□ -0.52
EWSR1-216ENST00000479135 SAR1BQ9Y6B6 198 aa11.79□□□□□ -0.52
EWSR1-216ENST00000479135 KRT1P04264 644 aa11.79□□□□□ -0.52
EWSR1-216ENST00000479135 STXBP2Q15833 593 aa11.79□□□□□ -0.52
EWSR1-216ENST00000479135 HADHQ16836 314 aaKnown RBP11.79□□□□□ -0.52
EWSR1-216ENST00000479135 WDR60Q8WVS4 1066 aa11.79□□□□□ -0.52
EWSR1-216ENST00000479135 CNBD2Q96M20 576 aa11.79□□□□□ -0.52
EWSR1-216ENST00000479135 DCTN4Q9UJW0 460 aa11.79□□□□□ -0.52
EWSR1-216ENST00000479135 EXOC7Q9UPT5 735 aa11.79□□□□□ -0.52
EWSR1-216ENST00000479135 LRCH1Q9Y2L9 728 aa11.79□□□□□ -0.52
EWSR1-216ENST00000479135 XPOTO43592 962 aaKnown RBP11.79□□□□□ -0.52
EWSR1-216ENST00000479135 PYGBP11216 843 aa11.79□□□□□ -0.52
EWSR1-216ENST00000479135 ZNF18P17022 549 aa11.79□□□□□ -0.52
EWSR1-216ENST00000479135 CADPS2Q86UW7 1296 aa11.79□□□□□ -0.52
EWSR1-216ENST00000479135 ANKRD13CQ8N6S4 541 aa11.79□□□□□ -0.52
EWSR1-216ENST00000479135 HDHD2Q9H0R4 259 aa11.79□□□□□ -0.52
EWSR1-216ENST00000479135 GOLGA8SH3BPF8 625 aa11.79□□□□□ -0.52
EWSR1-216ENST00000479135 CALML3P27482 149 aa11.79□□□□□ -0.52
EWSR1-216ENST00000479135 ALDH6A1Q02252 535 aaKnown RBP11.79□□□□□ -0.52
EWSR1-216ENST00000479135 MAGEB10Q96LZ2 347 aaPredicted RBP11.79□□□□□ -0.52
EWSR1-216ENST00000479135 GINM1Q9NU53 330 aa11.79□□□□□ -0.52
EWSR1-216ENST00000479135 H2AFY2Q9P0M6 372 aaPredicted RBP11.79□□□□□ -0.52
EWSR1-216ENST00000479135 PPIEQ9UNP9 301 aaKnown RBP11.79□□□□□ -0.52
EWSR1-216ENST00000479135 RNF103O00237 685 aa11.79□□□□□ -0.52
EWSR1-216ENST00000479135 MAFKO60675 156 aa11.79□□□□□ -0.52
EWSR1-216ENST00000479135 LCA5LO95447 670 aa11.79□□□□□ -0.52
EWSR1-216ENST00000479135 CIITAP33076 1130 aa11.79□□□□□ -0.52
EWSR1-216ENST00000479135 MYL5Q02045 173 aa11.79□□□□□ -0.52
EWSR1-216ENST00000479135 OLFML1Q6UWY5 402 aa11.79□□□□□ -0.52
EWSR1-216ENST00000479135 OLFM1Q99784 485 aa11.79□□□□□ -0.52
EWSR1-216ENST00000479135 MT-ND3P03897 115 aa11.79□□□□□ -0.52
EWSR1-216ENST00000479135 SH3KBP1Q96B97 665 aa11.79□□□□□ -0.52
EWSR1-216ENST00000479135 NOP53Q9NZM5 478 aaKnown RBP11.79□□□□□ -0.52
EWSR1-216ENST00000479135 ARPP21Q9UBL0 812 aaPredicted RBP11.79□□□□□ -0.52
EWSR1-216ENST00000479135 MAP3K2Q9Y2U5 619 aa11.79□□□□□ -0.52
EWSR1-216ENST00000479135 CHEK2O96017 543 aa11.78□□□□□ -0.52
EWSR1-216ENST00000479135 CLUP10909 449 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms