RNA–Protein interactions for RNA: ENST00000479092.5

PTPN7-211, Transcript of protein tyrosine phosphatase, non-receptor type 7, human

TSL 5

Gene PTPN7, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN7-211	ENST00000479092	SNX17	Q15036	470 aa		13.43	□□□□□ -0.26
PTPN7-211	ENST00000479092	TRIM60	Q495X7	471 aa		13.43	□□□□□ -0.26
PTPN7-211	ENST00000479092	TTC38	Q5R3I4	469 aa		13.43	□□□□□ -0.26
PTPN7-211	ENST00000479092	C1orf53	Q5VUE5	145 aa		13.43	□□□□□ -0.26
PTPN7-211	ENST00000479092	ZNF746	Q6NUN9	644 aa	Predicted RBP	13.43	□□□□□ -0.26
PTPN7-211	ENST00000479092	MIS18BP1	Q6P0N0	1132 aa		13.43	□□□□□ -0.26
PTPN7-211	ENST00000479092	BRAP	Q7Z569	592 aa		13.43	□□□□□ -0.26
PTPN7-211	ENST00000479092	TRIM50	Q86XT4	487 aa		13.43	□□□□□ -0.26
PTPN7-211	ENST00000479092	SLFN12	Q8IYM2	578 aa		13.43	□□□□□ -0.26
PTPN7-211	ENST00000479092	C7orf61	Q8IZ16	206 aa		13.43	□□□□□ -0.26
PTPN7-211	ENST00000479092	SPRYD3	Q8NCJ5	442 aa		13.43	□□□□□ -0.26
PTPN7-211	ENST00000479092	ETNPPL	Q8TBG4	499 aa		13.43	□□□□□ -0.26
PTPN7-211	ENST00000479092	GLG1	Q92896	1179 aa		13.43	□□□□□ -0.26
PTPN7-211	ENST00000479092	FAM20A	Q96MK3	541 aa		13.43	□□□□□ -0.26
PTPN7-211	ENST00000479092	SAMM50	Q9Y512	469 aa		13.43	□□□□□ -0.26
PTPN7-211	ENST00000479092	EMSY	Q7Z589	1322 aa		13.42	□□□□□ -0.26
PTPN7-211	ENST00000479092	BACH1	O14867	736 aa		13.42	□□□□□ -0.26
PTPN7-211	ENST00000479092	TLR3	O15455	904 aa	Known RBP	13.42	□□□□□ -0.26
PTPN7-211	ENST00000479092	STX6	O43752	255 aa		13.42	□□□□□ -0.26
PTPN7-211	ENST00000479092	CCNE2	O96020	404 aa		13.42	□□□□□ -0.26
PTPN7-211	ENST00000479092	PDIA4	P13667	645 aa	Known RBP	13.42	□□□□□ -0.26
PTPN7-211	ENST00000479092	SFN	P31947	248 aa		13.42	□□□□□ -0.26
PTPN7-211	ENST00000479092	PSEN2	P49810	448 aa		13.42	□□□□□ -0.26
PTPN7-211	ENST00000479092	JAK3	P52333	1124 aa		13.42	□□□□□ -0.26
PTPN7-211	ENST00000479092	MFSD10	Q14728	455 aa		13.42	□□□□□ -0.26
PTPN7-211	ENST00000479092	KIAA0753	Q2KHM9	967 aa		13.42	□□□□□ -0.26
PTPN7-211	ENST00000479092	RILPL1	Q5EBL4	403 aa		13.42	□□□□□ -0.26
PTPN7-211	ENST00000479092	FAM160B1	Q5W0V3	765 aa		13.42	□□□□□ -0.26
PTPN7-211	ENST00000479092	FERMT3	Q86UX7	667 aa		13.42	□□□□□ -0.26
PTPN7-211	ENST00000479092	C7orf31	Q8N865	590 aa		13.42	□□□□□ -0.26
PTPN7-211	ENST00000479092	KCNMB3	Q9NPA1	279 aa		13.42	□□□□□ -0.26
PTPN7-211	ENST00000479092	PRKAG2	Q9UGJ0	569 aa		13.42	□□□□□ -0.26
PTPN7-211	ENST00000479092	NOD1	Q9Y239	953 aa		13.42	□□□□□ -0.26
PTPN7-211	ENST00000479092	DCDC2C	A8MYV0	355 aa		13.41	□□□□□ -0.26
PTPN7-211	ENST00000479092		H3BRB1	525 aa		13.41	□□□□□ -0.26
PTPN7-211	ENST00000479092	DHX15	O43143	795 aa	Known RBP	13.41	□□□□□ -0.26
PTPN7-211	ENST00000479092	PSMD10	O75832	226 aa		13.41	□□□□□ -0.26
PTPN7-211	ENST00000479092	PSAP	P07602	524 aa		13.41	□□□□□ -0.26
PTPN7-211	ENST00000479092	SUPT20HL2	P0C7V6	817 aa		13.41	□□□□□ -0.26
PTPN7-211	ENST00000479092	ANP32A	P39687	249 aa	Known RBP	13.41	□□□□□ -0.26
PTPN7-211	ENST00000479092	TLE2	Q04725	743 aa		13.41	□□□□□ -0.26
PTPN7-211	ENST00000479092	NBPF20	Q3BBV1	942 aa		13.41	□□□□□ -0.26
PTPN7-211	ENST00000479092	NFRKB	Q6P4R8	1299 aa		13.41	□□□□□ -0.26
PTPN7-211	ENST00000479092	KAT2B	Q92831	832 aa		13.41	□□□□□ -0.26
PTPN7-211	ENST00000479092	C16orf70	Q9BSU1	422 aa		13.41	□□□□□ -0.26
PTPN7-211	ENST00000479092	UNC45A	Q9H3U1	944 aa		13.41	□□□□□ -0.26
PTPN7-211	ENST00000479092	SMARCAD1	Q9H4L7	1026 aa		13.41	□□□□□ -0.26
PTPN7-211	ENST00000479092	TUT1	Q9H6E5	874 aa	Known RBP	13.41	□□□□□ -0.26
PTPN7-211	ENST00000479092	ERAP1	Q9NZ08	941 aa		13.41	□□□□□ -0.26
PTPN7-211	ENST00000479092	TELO2	Q9Y4R8	837 aa		13.41	□□□□□ -0.26
PTPN7-211	ENST00000479092	NR2E3	Q9Y5X4	410 aa		13.41	□□□□□ -0.26
PTPN7-211	ENST00000479092	GSTTP1	A0A1W2PQM5	241 aa		13.4	□□□□□ -0.26
PTPN7-211	ENST00000479092	WNT7A	O00755	349 aa		13.4	□□□□□ -0.26
PTPN7-211	ENST00000479092	OR52Z1	P0C646	297 aa		13.4	□□□□□ -0.26
PTPN7-211	ENST00000479092	MARK3	P27448	753 aa		13.4	□□□□□ -0.26
PTPN7-211	ENST00000479092	SLC26A2	P50443	739 aa		13.4	□□□□□ -0.26
PTPN7-211	ENST00000479092	PTPN11	Q06124	597 aa	Predicted RBP	13.4	□□□□□ -0.26
PTPN7-211	ENST00000479092	ZNF174	Q15697	407 aa		13.4	□□□□□ -0.26
PTPN7-211	ENST00000479092	ANKRD33	Q7Z3H0	272 aa		13.4	□□□□□ -0.26
PTPN7-211	ENST00000479092	MIER3	Q7Z3K6	550 aa		13.4	□□□□□ -0.26
PTPN7-211	ENST00000479092	SLC43A3	Q8NBI5	491 aa		13.4	□□□□□ -0.26
PTPN7-211	ENST00000479092	RDM1	Q8NG50	284 aa		13.4	□□□□□ -0.26
PTPN7-211	ENST00000479092	TNPO1	Q92973	898 aa	Known RBP	13.4	□□□□□ -0.26
PTPN7-211	ENST00000479092	GJA10	Q969M2	543 aa		13.4	□□□□□ -0.26
PTPN7-211	ENST00000479092	TOX2	Q96NM4	488 aa		13.4	□□□□□ -0.26
PTPN7-211	ENST00000479092	PRDM5	Q9NQX1	630 aa	Predicted RBP	13.4	□□□□□ -0.26
PTPN7-211	ENST00000479092	ZNF302	Q9NR11	478 aa		13.4	□□□□□ -0.26
PTPN7-211	ENST00000479092	DISC1	Q9NRI5	854 aa		13.4	□□□□□ -0.26
PTPN7-211	ENST00000479092	TRPC6	Q9Y210	931 aa		13.4	□□□□□ -0.26
PTPN7-211	ENST00000479092	PCDHA10	Q9Y5I2	948 aa		13.4	□□□□□ -0.26
PTPN7-211	ENST00000479092	LGR5	O75473	907 aa		13.39	□□□□□ -0.27
PTPN7-211	ENST00000479092	CLTB	P09497	229 aa		13.39	□□□□□ -0.27
PTPN7-211	ENST00000479092	TXK	P42681	527 aa		13.39	□□□□□ -0.27
PTPN7-211	ENST00000479092	STAT5B	P51692	787 aa		13.39	□□□□□ -0.27
PTPN7-211	ENST00000479092	PPP2R5C	Q13362	524 aa		13.39	□□□□□ -0.27
PTPN7-211	ENST00000479092	NBR1	Q14596	966 aa		13.39	□□□□□ -0.27
PTPN7-211	ENST00000479092	TMEM266	Q2M3C6	531 aa		13.39	□□□□□ -0.27
PTPN7-211	ENST00000479092	NCAPH2	Q6IBW4	605 aa		13.39	□□□□□ -0.27
PTPN7-211	ENST00000479092	PDXDC2P	Q6P474	469 aa		13.39	□□□□□ -0.27
PTPN7-211	ENST00000479092	ABHD15	Q6UXT9	468 aa		13.39	□□□□□ -0.27
PTPN7-211	ENST00000479092	CCDC60	Q8IWA6	550 aa	Predicted RBP	13.39	□□□□□ -0.27
PTPN7-211	ENST00000479092	FAM126B	Q8IXS8	530 aa		13.39	□□□□□ -0.27
PTPN7-211	ENST00000479092	HAS1	Q92839	578 aa		13.39	□□□□□ -0.27
PTPN7-211	ENST00000479092	DAXX	Q9UER7	740 aa	Predicted RBP	13.39	□□□□□ -0.27
PTPN7-211	ENST00000479092	VAV3	Q9UKW4	847 aa		13.39	□□□□□ -0.27
PTPN7-211	ENST00000479092	MTMR6	Q9Y217	621 aa		13.39	□□□□□ -0.27
PTPN7-211	ENST00000479092	TNRC18	O15417	2968 aa	Predicted RBP	13.39	□□□□□ -0.27
PTPN7-211	ENST00000479092	GRIN2D	O15399	1336 aa		13.39	□□□□□ -0.27
PTPN7-211	ENST00000479092	HAS3	O00219	553 aa		13.38	□□□□□ -0.27
PTPN7-211	ENST00000479092	LAD1	O00515	517 aa		13.38	□□□□□ -0.27
PTPN7-211	ENST00000479092	ATG7	O95352	703 aa		13.38	□□□□□ -0.27
PTPN7-211	ENST00000479092	BMP15	O95972	392 aa		13.38	□□□□□ -0.27
PTPN7-211	ENST00000479092	SMIM10L2A	P0DMW4	78 aa		13.38	□□□□□ -0.27
PTPN7-211	ENST00000479092	SMIM10L2B	P0DMW5	78 aa		13.38	□□□□□ -0.27
PTPN7-211	ENST00000479092	GNAT1	P11488	350 aa		13.38	□□□□□ -0.27
PTPN7-211	ENST00000479092	CDK7	P50613	346 aa		13.38	□□□□□ -0.27
PTPN7-211	ENST00000479092	REST	Q13127	1097 aa		13.38	□□□□□ -0.27
PTPN7-211	ENST00000479092	SWSAP1	Q6NVH7	229 aa		13.38	□□□□□ -0.27
PTPN7-211	ENST00000479092	PLPPR4	Q7Z2D5	763 aa		13.38	□□□□□ -0.27
PTPN7-211	ENST00000479092	SESTD1	Q86VW0	696 aa		13.38	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 51 ms