RNA–Protein interactions for RNA: ENST00000478596.5

USP11-207, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 970 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-207ENST00000478596 KCTD1Q719H9 257 aa16.78■□□□□ 0.28
USP11-207ENST00000478596 SERINC5Q86VE9 423 aa16.78■□□□□ 0.28
USP11-207ENST00000478596 TMEM105Q8N8V8 129 aa16.78■□□□□ 0.28
USP11-207ENST00000478596 CNTNAP3BQ96NU0 1288 aa16.78■□□□□ 0.28
USP11-207ENST00000478596 PLVAPQ9BX97 442 aa16.78■□□□□ 0.28
USP11-207ENST00000478596 CNTNAP3Q9BZ76 1288 aa16.78■□□□□ 0.28
USP11-207ENST00000478596 RANBP17Q9H2T7 1088 aaKnown RBP16.78■□□□□ 0.28
USP11-207ENST00000478596 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.78■□□□□ 0.28
USP11-207ENST00000478596 TAF6LQ9Y6J9 622 aa16.78■□□□□ 0.28
USP11-207ENST00000478596 ERICH2A1L162 156 aa16.77■□□□□ 0.28
USP11-207ENST00000478596 B4DLN1 442 aa16.77■□□□□ 0.28
USP11-207ENST00000478596 CALML3P27482 149 aa16.77■□□□□ 0.28
USP11-207ENST00000478596 THPOP40225 353 aa16.77■□□□□ 0.28
USP11-207ENST00000478596 MRPL12P52815 198 aaKnown RBP16.77■□□□□ 0.28
USP11-207ENST00000478596 ANAPC15P60006 121 aa16.77■□□□□ 0.28
USP11-207ENST00000478596 ZNF200P98182 395 aaPredicted RBP16.77■□□□□ 0.28
USP11-207ENST00000478596 MFSD10Q14728 455 aa16.77■□□□□ 0.28
USP11-207ENST00000478596 RNF207Q6ZRF8 634 aa16.77■□□□□ 0.28
USP11-207ENST00000478596 STOX1Q6ZVD7 989 aa16.77■□□□□ 0.28
USP11-207ENST00000478596 IQCA1Q86XH1 822 aa16.77■□□□□ 0.28
USP11-207ENST00000478596 RASEFQ8IZ41 740 aa16.77■□□□□ 0.28
USP11-207ENST00000478596 CLEC4DQ8WXI8 215 aa16.77■□□□□ 0.28
USP11-207ENST00000478596 SUSD6Q92537 303 aa16.77■□□□□ 0.28
USP11-207ENST00000478596 NEK1Q96PY6 1258 aa16.77■□□□□ 0.28
USP11-207ENST00000478596 NLRC5Q86WI3 1866 aa16.77■□□□□ 0.27
USP11-207ENST00000478596 HMGB1P09429 215 aaKnown RBP16.76■□□□□ 0.27
USP11-207ENST00000478596 TFAP4Q01664 338 aa16.76■□□□□ 0.27
USP11-207ENST00000478596 KIAA0753Q2KHM9 967 aa16.76■□□□□ 0.27
USP11-207ENST00000478596 EMID1Q96A84 441 aaPredicted RBP16.76■□□□□ 0.27
USP11-207ENST00000478596 TBC1D32Q96NH3 1257 aa16.76■□□□□ 0.27
USP11-207ENST00000478596 ALG1Q9BT22 464 aa16.76■□□□□ 0.27
USP11-207ENST00000478596 RC3H2Q9HBD1 1191 aaKnown RBP16.76■□□□□ 0.27
USP11-207ENST00000478596 PLAGL2Q9UPG8 496 aa16.76■□□□□ 0.27
USP11-207ENST00000478596 TPRP12270 2363 aaKnown RBP16.75■□□□□ 0.27
USP11-207ENST00000478596 ADGRA3Q8IWK6 1321 aa16.75■□□□□ 0.27
USP11-207ENST00000478596 PRC1O43663 620 aa16.75■□□□□ 0.27
USP11-207ENST00000478596 GLP2RO95838 553 aa16.75■□□□□ 0.27
USP11-207ENST00000478596 MCM5P33992 734 aa16.75■□□□□ 0.27
USP11-207ENST00000478596 NT5C2P49902 561 aa16.75■□□□□ 0.27
USP11-207ENST00000478596 RPS6P62753 249 aaKnown RBP16.75■□□□□ 0.27
USP11-207ENST00000478596 HIC1Q14526 733 aa16.75■□□□□ 0.27
USP11-207ENST00000478596 LY6KQ17RY6 165 aa16.75■□□□□ 0.27
USP11-207ENST00000478596 ADCK5Q3MIX3 580 aa16.75■□□□□ 0.27
USP11-207ENST00000478596 PPP4R3BQ5MIZ7 849 aa16.75■□□□□ 0.27
USP11-207ENST00000478596 APBB2Q92870 758 aa16.75■□□□□ 0.27
USP11-207ENST00000478596 P2RX5Q93086 422 aa16.75■□□□□ 0.27
USP11-207ENST00000478596 CYP46A1Q9Y6A2 500 aa16.75■□□□□ 0.27
USP11-207ENST00000478596 ACACBO00763 2458 aa16.74■□□□□ 0.27
USP11-207ENST00000478596 CAND2O75155 1236 aa16.74■□□□□ 0.27
USP11-207ENST00000478596 RBM25P49756 843 aaKnown RBP16.74■□□□□ 0.27
USP11-207ENST00000478596 PUM1Q14671 1186 aaKnown RBP eCLIP16.74■□□□□ 0.27
USP11-207ENST00000478596 CHST3Q7LGC8 479 aa16.74■□□□□ 0.27
USP11-207ENST00000478596 ADGRD2Q7Z7M1 963 aa16.74■□□□□ 0.27
USP11-207ENST00000478596 UBALD2Q8IYN6 164 aa16.74■□□□□ 0.27
USP11-207ENST00000478596 CHMP4CQ96CF2 233 aa16.74■□□□□ 0.27
USP11-207ENST00000478596 ZKSCAN3Q9BRR0 538 aa16.74■□□□□ 0.27
USP11-207ENST00000478596 PNMA2Q9UL42 364 aa16.74■□□□□ 0.27
USP11-207ENST00000478596 NAP1L2Q9ULW6 460 aaPredicted RBP16.74■□□□□ 0.27
USP11-207ENST00000478596 BARX2Q9UMQ3 279 aaPredicted RBP16.74■□□□□ 0.27
USP11-207ENST00000478596 STX8Q9UNK0 236 aa16.74■□□□□ 0.27
USP11-207ENST00000478596 EP300Q09472 2414 aaPredicted RBP16.74■□□□□ 0.27
USP11-207ENST00000478596 IFIT3O14879 490 aaKnown RBP16.73■□□□□ 0.27
USP11-207ENST00000478596 HOXD8P13378 290 aaPredicted RBP16.73■□□□□ 0.27
USP11-207ENST00000478596 NAALADL2Q58DX5 795 aa16.73■□□□□ 0.27
USP11-207ENST00000478596 ASTLQ6HA08 431 aaPredicted RBP16.73■□□□□ 0.27
USP11-207ENST00000478596 BTNL9Q6UXG8 535 aa16.73■□□□□ 0.27
USP11-207ENST00000478596 NFXL1Q6ZNB6 911 aa16.73■□□□□ 0.27
USP11-207ENST00000478596 DHX37Q8IY37 1157 aaKnown RBP16.73■□□□□ 0.27
USP11-207ENST00000478596 PPTC7Q8NI37 304 aa16.73■□□□□ 0.27
USP11-207ENST00000478596 KCNB2Q92953 911 aa16.73■□□□□ 0.27
USP11-207ENST00000478596 CSPG5O95196 566 aa16.72■□□□□ 0.27
USP11-207ENST00000478596 ZNF286BP0CG31 522 aa16.72■□□□□ 0.27
USP11-207ENST00000478596 CPA1P15085 419 aa16.72■□□□□ 0.27
USP11-207ENST00000478596 DNAJB1P25685 340 aa16.72■□□□□ 0.27
USP11-207ENST00000478596 NRIP1P48552 1158 aa16.72■□□□□ 0.27
USP11-207ENST00000478596 TSGA10IPQ3SY00 556 aa16.72■□□□□ 0.27
USP11-207ENST00000478596 CCDC178Q5BJE1 867 aa16.72■□□□□ 0.27
USP11-207ENST00000478596 ZBTB33Q86T24 672 aa16.72■□□□□ 0.27
USP11-207ENST00000478596 MB21D2Q8IYB1 491 aaPredicted RBP16.72■□□□□ 0.27
USP11-207ENST00000478596 TCEANC2Q96MN5 208 aa16.72■□□□□ 0.27
USP11-207ENST00000478596 LRRC2Q9BYS8 371 aa16.72■□□□□ 0.27
USP11-207ENST00000478596 OSBPL7Q9BZF2 842 aa16.72■□□□□ 0.27
USP11-207ENST00000478596 NMT2O60551 498 aa16.71■□□□□ 0.27
USP11-207ENST00000478596 RPS6KB1P23443 525 aa16.71■□□□□ 0.27
USP11-207ENST00000478596 HOXC8P31273 242 aa16.71■□□□□ 0.27
USP11-207ENST00000478596 MTMR3Q13615 1198 aa16.71■□□□□ 0.27
USP11-207ENST00000478596 LAMC2Q13753 1193 aa16.71■□□□□ 0.27
USP11-207ENST00000478596 WTAPQ15007 396 aa16.71■□□□□ 0.27
USP11-207ENST00000478596 RABEP1Q15276 862 aa16.71■□□□□ 0.27
USP11-207ENST00000478596 IFIT1BQ5T764 474 aaKnown RBP16.71■□□□□ 0.27
USP11-207ENST00000478596 SEPT14Q6ZU15 432 aa16.71■□□□□ 0.27
USP11-207ENST00000478596 CYB5R4Q7L1T6 521 aa16.71■□□□□ 0.27
USP11-207ENST00000478596 DHX32Q7L7V1 743 aaKnown RBP16.71■□□□□ 0.27
USP11-207ENST00000478596 RASGRP2Q7LDG7 609 aa16.71■□□□□ 0.27
USP11-207ENST00000478596 KREMEN2Q8NCW0 462 aa16.71■□□□□ 0.27
USP11-207ENST00000478596 SPPL3Q8TCT6 385 aa16.71■□□□□ 0.27
USP11-207ENST00000478596 ZNF689Q96CS4 500 aaPredicted RBP16.71■□□□□ 0.27
USP11-207ENST00000478596 ZSCAN10Q96SZ4 725 aaPredicted RBP16.71■□□□□ 0.27
USP11-207ENST00000478596 PDRG1Q9NUG6 133 aa16.71■□□□□ 0.27
USP11-207ENST00000478596 ZSWIM5Q9P217 1185 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms