RNA–Protein interactions for RNA: ENST00000478420.1

SMARCA1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 3

Gene SMARCA1, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-204ENST00000478420 TELO2Q9Y4R8 837 aa5.62□□□□□ -1.51
SMARCA1-204ENST00000478420 LOC105371045A0A1W2PR82 267 aa5.61□□□□□ -1.51
SMARCA1-204ENST00000478420 GSG1L2A8MUP6 293 aa5.61□□□□□ -1.51
SMARCA1-204ENST00000478420 CBX4O00257 560 aa5.61□□□□□ -1.51
SMARCA1-204ENST00000478420 CLASP2O75122 1294 aaKnown RBP5.61□□□□□ -1.51
SMARCA1-204ENST00000478420 TSPAN15O95858 294 aa5.61□□□□□ -1.51
SMARCA1-204ENST00000478420 C1QTNF9P0C862 333 aa5.61□□□□□ -1.51
SMARCA1-204ENST00000478420 CYP2C8P10632 490 aa5.61□□□□□ -1.51
SMARCA1-204ENST00000478420 ATF2P15336 505 aa5.61□□□□□ -1.51
SMARCA1-204ENST00000478420 PTPN1P18031 435 aaKnown RBP5.61□□□□□ -1.51
SMARCA1-204ENST00000478420 IGFBP6P24592 240 aaPredicted RBP5.61□□□□□ -1.51
SMARCA1-204ENST00000478420 CANXP27824 592 aaKnown RBP5.61□□□□□ -1.51
SMARCA1-204ENST00000478420 MASP1P48740 699 aa5.61□□□□□ -1.51
SMARCA1-204ENST00000478420 MECP2P51608 486 aaKnown RBP5.61□□□□□ -1.51
SMARCA1-204ENST00000478420 PAN2Q504Q3 1202 aaKnown RBP5.61□□□□□ -1.51
SMARCA1-204ENST00000478420 BTBD8Q5XKL5 378 aa5.61□□□□□ -1.51
SMARCA1-204ENST00000478420 TEPPQ6URK8 271 aa5.61□□□□□ -1.51
SMARCA1-204ENST00000478420 SMARCC2Q8TAQ2 1214 aa5.61□□□□□ -1.51
SMARCA1-204ENST00000478420 BOCQ9BWV1 1114 aa5.61□□□□□ -1.51
SMARCA1-204ENST00000478420 PCDH18Q9HCL0 1135 aa5.61□□□□□ -1.51
SMARCA1-204ENST00000478420 RIC8BQ9NVN3 520 aa5.61□□□□□ -1.51
SMARCA1-204ENST00000478420 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.61□□□□□ -1.51
SMARCA1-204ENST00000478420 SMG5Q9UPR3 1016 aaKnown RBP5.61□□□□□ -1.51
SMARCA1-204ENST00000478420 SBNO2Q9Y2G9 1366 aa5.61□□□□□ -1.51
SMARCA1-204ENST00000478420 FAM83GA6ND36 823 aa5.6□□□□□ -1.51
SMARCA1-204ENST00000478420 TRAF5O00463 557 aa5.6□□□□□ -1.51
SMARCA1-204ENST00000478420 SCDO00767 359 aa5.6□□□□□ -1.51
SMARCA1-204ENST00000478420 HIP1RO75146 1068 aa5.6□□□□□ -1.51
SMARCA1-204ENST00000478420 LRG1P02750 347 aa5.6□□□□□ -1.51
SMARCA1-204ENST00000478420 KRT1P04264 644 aa5.6□□□□□ -1.51
SMARCA1-204ENST00000478420 C8BP07358 591 aa5.6□□□□□ -1.51
SMARCA1-204ENST00000478420 FAHP16930 419 aa5.6□□□□□ -1.51
SMARCA1-204ENST00000478420 RAP1GAPP47736 663 aa5.6□□□□□ -1.51
SMARCA1-204ENST00000478420 LIMS1P48059 325 aa5.6□□□□□ -1.51
SMARCA1-204ENST00000478420 FOXO4P98177 505 aa5.6□□□□□ -1.51
SMARCA1-204ENST00000478420 IRF9Q00978 393 aa5.6□□□□□ -1.51
SMARCA1-204ENST00000478420 CR1LQ2VPA4 569 aa5.6□□□□□ -1.51
SMARCA1-204ENST00000478420 RNF187Q5TA31 235 aaPredicted RBP5.6□□□□□ -1.51
SMARCA1-204ENST00000478420 OTOP1Q7RTM1 612 aa5.6□□□□□ -1.51
SMARCA1-204ENST00000478420 KIF18BQ86Y91 864 aa5.6□□□□□ -1.51
SMARCA1-204ENST00000478420 FAM26EQ8N5C1 309 aa5.6□□□□□ -1.51
SMARCA1-204ENST00000478420 ORAI3Q9BRQ5 295 aa5.6□□□□□ -1.51
SMARCA1-204ENST00000478420 MTFR1LQ9H019 292 aa5.6□□□□□ -1.51
SMARCA1-204ENST00000478420 B4GALT6Q9UBX8 382 aa5.6□□□□□ -1.51
SMARCA1-204ENST00000478420 CNOT6Q9ULM6 557 aaKnown RBP5.6□□□□□ -1.51
SMARCA1-204ENST00000478420 ZKSCAN5Q9Y2L8 839 aa5.6□□□□□ -1.51
SMARCA1-204ENST00000478420 PTPDC1A2A3K4 754 aa5.59□□□□□ -1.51
SMARCA1-204ENST00000478420 FAM90A27PA6NNH2 459 aa5.59□□□□□ -1.51
SMARCA1-204ENST00000478420 RFXAPO00287 272 aa5.59□□□□□ -1.51
SMARCA1-204ENST00000478420 GAS7O60861 476 aa5.59□□□□□ -1.51
SMARCA1-204ENST00000478420 KRT37O76014 449 aa5.59□□□□□ -1.51
SMARCA1-204ENST00000478420 STAT3P40763 770 aa5.59□□□□□ -1.51
SMARCA1-204ENST00000478420 PCBP1Q15365 356 aaKnown RBP eCLIP5.59□□□□□ -1.51
SMARCA1-204ENST00000478420 CPZQ66K79 652 aa5.59□□□□□ -1.51
SMARCA1-204ENST00000478420 PKN3Q6P5Z2 889 aa5.59□□□□□ -1.51
SMARCA1-204ENST00000478420 THNSL2Q86YJ6 484 aa5.59□□□□□ -1.51
SMARCA1-204ENST00000478420 NOSTRINQ8IVI9 506 aa5.59□□□□□ -1.51
SMARCA1-204ENST00000478420 CHAC2Q8WUX2 184 aa5.59□□□□□ -1.51
SMARCA1-204ENST00000478420 LEO1Q8WVC0 666 aaPredicted RBP5.59□□□□□ -1.51
SMARCA1-204ENST00000478420 CAAP1Q9H8G2 361 aa5.59□□□□□ -1.51
SMARCA1-204ENST00000478420 CD320Q9NPF0 282 aa5.59□□□□□ -1.51
SMARCA1-204ENST00000478420 KCNH7Q9NS40 1196 aa5.59□□□□□ -1.51
SMARCA1-204ENST00000478420 IFT57Q9NWB7 429 aa5.59□□□□□ -1.51
SMARCA1-204ENST00000478420 HSPBP1Q9NZL4 362 aa5.59□□□□□ -1.51
SMARCA1-204ENST00000478420 PRAMEF25A6NGN4 478 aa5.58□□□□□ -1.52
SMARCA1-204ENST00000478420 H7C1D1 291 aa5.58□□□□□ -1.52
SMARCA1-204ENST00000478420 ACOT7O00154 380 aa5.58□□□□□ -1.52
SMARCA1-204ENST00000478420 F2P00734 622 aa5.58□□□□□ -1.52
SMARCA1-204ENST00000478420 C8AP07357 584 aa5.58□□□□□ -1.52
SMARCA1-204ENST00000478420 PI3P19957 117 aa5.58□□□□□ -1.52
SMARCA1-204ENST00000478420 SOX5P35711 763 aa5.58□□□□□ -1.52
SMARCA1-204ENST00000478420 SCNN1BP51168 640 aa5.58□□□□□ -1.52
SMARCA1-204ENST00000478420 LINC00310P59036 64 aa5.58□□□□□ -1.52
SMARCA1-204ENST00000478420 SSPNQ14714 243 aa5.58□□□□□ -1.52
SMARCA1-204ENST00000478420 SART3Q15020 963 aaKnown RBP5.58□□□□□ -1.52
SMARCA1-204ENST00000478420 KCNA10Q16322 511 aa5.58□□□□□ -1.52
SMARCA1-204ENST00000478420 ZNF385BQ569K4 471 aa5.58□□□□□ -1.52
SMARCA1-204ENST00000478420 CT47A1Q5JQC4 288 aaPredicted RBP5.58□□□□□ -1.52
SMARCA1-204ENST00000478420 CNKSR3Q6P9H4 555 aa5.58□□□□□ -1.52
SMARCA1-204ENST00000478420 ZNF662Q6ZS27 426 aa5.58□□□□□ -1.52
SMARCA1-204ENST00000478420 RNF180Q86T96 592 aa5.58□□□□□ -1.52
SMARCA1-204ENST00000478420 FAM129CQ86XR2 697 aa5.58□□□□□ -1.52
SMARCA1-204ENST00000478420 FAM177A1Q8N128 213 aaPredicted RBP5.58□□□□□ -1.52
SMARCA1-204ENST00000478420 OR2W6PQ8NHA6 318 aa5.58□□□□□ -1.52
SMARCA1-204ENST00000478420 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.58□□□□□ -1.52
SMARCA1-204ENST00000478420 SPC25Q9HBM1 224 aa5.58□□□□□ -1.52
SMARCA1-204ENST00000478420 KCTD3Q9Y597 815 aa5.58□□□□□ -1.52
SMARCA1-204ENST00000478420 NPIPB6E9PJ23 425 aa5.57□□□□□ -1.52
SMARCA1-204ENST00000478420 DNAJC6O75061 913 aa5.57□□□□□ -1.52
SMARCA1-204ENST00000478420 ZBTB48P10074 688 aaPredicted RBP5.57□□□□□ -1.52
SMARCA1-204ENST00000478420 ZNF174Q15697 407 aa5.57□□□□□ -1.52
SMARCA1-204ENST00000478420 ZNF124Q15973 351 aa5.57□□□□□ -1.52
SMARCA1-204ENST00000478420 SEPT7Q16181 437 aaKnown RBP5.57□□□□□ -1.52
SMARCA1-204ENST00000478420 VASNQ6EMK4 673 aa5.57□□□□□ -1.52
SMARCA1-204ENST00000478420 DDX46Q7L014 1031 aaKnown RBP5.57□□□□□ -1.52
SMARCA1-204ENST00000478420 FILIP1Q7Z7B0 1213 aa5.57□□□□□ -1.52
SMARCA1-204ENST00000478420 TMEFF1Q8IYR6 380 aa5.57□□□□□ -1.52
SMARCA1-204ENST00000478420 NXPE1Q8N323 547 aa5.57□□□□□ -1.52
SMARCA1-204ENST00000478420 DLG3Q92796 817 aa5.57□□□□□ -1.52
SMARCA1-204ENST00000478420 PWWP2AQ96N64 755 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms