RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 WNT8BQ93098 351 aa16.54■□□□□ 0.24
SMARCE1-209ENST00000478349 UHRF1Q96T88 793 aaPredicted RBP16.54■□□□□ 0.24
SMARCE1-209ENST00000478349 SDF4Q9BRK5 362 aa16.54■□□□□ 0.24
SMARCE1-209ENST00000478349 SMARCAD1Q9H4L7 1026 aa16.54■□□□□ 0.24
SMARCE1-209ENST00000478349 AZI2Q9H6S1 392 aa16.54■□□□□ 0.24
SMARCE1-209ENST00000478349 SETD4Q9NVD3 440 aa16.54■□□□□ 0.24
SMARCE1-209ENST00000478349 PCDHA6Q9UN73 950 aa16.54■□□□□ 0.24
SMARCE1-209ENST00000478349 PCDHA8Q9Y5H6 950 aa16.54■□□□□ 0.24
SMARCE1-209ENST00000478349 TTC28Q96AY4 2481 aa16.54■□□□□ 0.24
SMARCE1-209ENST00000478349 KCNA2P16389 499 aa16.53■□□□□ 0.24
SMARCE1-209ENST00000478349 ADCY7P51828 1080 aa16.53■□□□□ 0.24
SMARCE1-209ENST00000478349 ERVK-21P61565 698 aa16.53■□□□□ 0.24
SMARCE1-209ENST00000478349 GRB10Q13322 594 aa16.53■□□□□ 0.24
SMARCE1-209ENST00000478349 AP3B2Q13367 1082 aa16.53■□□□□ 0.24
SMARCE1-209ENST00000478349 MBTPS1Q14703 1052 aa16.53■□□□□ 0.24
SMARCE1-209ENST00000478349 UBE2SQ16763 222 aa16.53■□□□□ 0.24
SMARCE1-209ENST00000478349 TSGA10IPQ3SY00 556 aa16.53■□□□□ 0.24
SMARCE1-209ENST00000478349 MCTP2Q6DN12 878 aa16.53■□□□□ 0.24
SMARCE1-209ENST00000478349 YME1L1Q96TA2 773 aa16.53■□□□□ 0.24
SMARCE1-209ENST00000478349 LRRC2Q9BYS8 371 aa16.53■□□□□ 0.24
SMARCE1-209ENST00000478349 JPH1Q9HDC5 661 aaPredicted RBP16.53■□□□□ 0.24
SMARCE1-209ENST00000478349 JADE2Q9NQC1 790 aa16.53■□□□□ 0.24
SMARCE1-209ENST00000478349 UBIAD1Q9Y5Z9 338 aa16.53■□□□□ 0.24
SMARCE1-209ENST00000478349 SCN5AQ14524 2016 aa16.52■□□□□ 0.24
SMARCE1-209ENST00000478349 LINC01553A4QN01 128 aa16.52■□□□□ 0.24
SMARCE1-209ENST00000478349 GOLGA8AA7E2F4 631 aa16.52■□□□□ 0.24
SMARCE1-209ENST00000478349 GOLGA8BA8MQT2 603 aa16.52■□□□□ 0.24
SMARCE1-209ENST00000478349 ITGB5P18084 799 aa16.52■□□□□ 0.24
SMARCE1-209ENST00000478349 HIC1Q14526 733 aa16.52■□□□□ 0.24
SMARCE1-209ENST00000478349 PTPROQ16827 1216 aa16.52■□□□□ 0.24
SMARCE1-209ENST00000478349 FAM117BQ6P1L5 589 aa16.52■□□□□ 0.24
SMARCE1-209ENST00000478349 RPAINQ86UA6 219 aa16.52■□□□□ 0.24
SMARCE1-209ENST00000478349 RAB11FIP4Q86YS3 637 aa16.52■□□□□ 0.24
SMARCE1-209ENST00000478349 CCDC12Q8WUD4 166 aaPredicted RBP16.52■□□□□ 0.24
SMARCE1-209ENST00000478349 HLA-CQ95604 372 aa16.52■□□□□ 0.24
SMARCE1-209ENST00000478349 IFIH1Q9BYX4 1025 aaKnown RBP16.52■□□□□ 0.24
SMARCE1-209ENST00000478349 RIC8AQ9NPQ8 531 aa16.52■□□□□ 0.24
SMARCE1-209ENST00000478349 TUBE1Q9UJT0 475 aa16.52■□□□□ 0.24
SMARCE1-209ENST00000478349 CNTNAP5Q8WYK1 1306 aa16.51■□□□□ 0.23
SMARCE1-209ENST00000478349 hCG_1642624A0A1W2PR95 340 aa16.51■□□□□ 0.23
SMARCE1-209ENST00000478349 LCHNA4D1U4 455 aa16.51■□□□□ 0.23
SMARCE1-209ENST00000478349 EPOPA6NHQ4 379 aa16.51■□□□□ 0.23
SMARCE1-209ENST00000478349 RRN3P2A6NIE6 340 aa16.51■□□□□ 0.23
SMARCE1-209ENST00000478349 M0QZ92 97 aa16.51■□□□□ 0.23
SMARCE1-209ENST00000478349 RFXAPO00287 272 aa16.51■□□□□ 0.23
SMARCE1-209ENST00000478349 FAM26DQ5JW98 314 aa16.51■□□□□ 0.23
SMARCE1-209ENST00000478349 WWC2Q6AWC2 1192 aa16.51■□□□□ 0.23
SMARCE1-209ENST00000478349 FBXO22Q8NEZ5 403 aa16.51■□□□□ 0.23
SMARCE1-209ENST00000478349 GDPD5Q8WTR4 605 aa16.51■□□□□ 0.23
SMARCE1-209ENST00000478349 BCAS3Q9H6U6 928 aa16.51■□□□□ 0.23
SMARCE1-209ENST00000478349 SLC9A2Q9UBY0 812 aa16.51■□□□□ 0.23
SMARCE1-209ENST00000478349 TCEAL9Q9UHQ7 104 aa16.51■□□□□ 0.23
SMARCE1-209ENST00000478349 NAP1L2Q9ULW6 460 aaPredicted RBP16.51■□□□□ 0.23
SMARCE1-209ENST00000478349 GBF1Q92538 1859 aa16.5■□□□□ 0.23
SMARCE1-209ENST00000478349 NFASCO94856 1347 aa16.5■□□□□ 0.23
SMARCE1-209ENST00000478349 EYSQ5T1H1 3165 aa16.5■□□□□ 0.23
SMARCE1-209ENST00000478349 KLF18A0A0U1RQI7 1052 aa16.5■□□□□ 0.23
SMARCE1-209ENST00000478349 ADAM17P78536 824 aa16.5■□□□□ 0.23
SMARCE1-209ENST00000478349 HTRA4P83105 476 aaPredicted RBP16.5■□□□□ 0.23
SMARCE1-209ENST00000478349 GRIK4Q16099 956 aa16.5■□□□□ 0.23
SMARCE1-209ENST00000478349 FAM43BQ6ZT52 329 aaPredicted RBP16.5■□□□□ 0.23
SMARCE1-209ENST00000478349 TMCO2Q7Z6W1 182 aaPredicted RBP16.5■□□□□ 0.23
SMARCE1-209ENST00000478349 MXRA8Q9BRK3 442 aa16.5■□□□□ 0.23
SMARCE1-209ENST00000478349 PKD2L1Q9P0L9 805 aa16.5■□□□□ 0.23
SMARCE1-209ENST00000478349 MTUS1Q9ULD2 1270 aa16.5■□□□□ 0.23
SMARCE1-209ENST00000478349 ARHGEF15O94989 841 aa16.49■□□□□ 0.23
SMARCE1-209ENST00000478349 MARK3P27448 753 aa16.49■□□□□ 0.23
SMARCE1-209ENST00000478349 ZNF76P36508 570 aa16.49■□□□□ 0.23
SMARCE1-209ENST00000478349 SLC26A2P50443 739 aa16.49■□□□□ 0.23
SMARCE1-209ENST00000478349 METAP2P50579 478 aaKnown RBP eCLIP16.49■□□□□ 0.23
SMARCE1-209ENST00000478349 EXOSC10Q01780 885 aaKnown RBP16.49■□□□□ 0.23
SMARCE1-209ENST00000478349 CEP55Q53EZ4 464 aa16.49■□□□□ 0.23
SMARCE1-209ENST00000478349 IER5Q5VY09 327 aa16.49■□□□□ 0.23
SMARCE1-209ENST00000478349 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.49■□□□□ 0.232e-7■■□□□ 13.5
SMARCE1-209ENST00000478349 SP7Q8TDD2 431 aaPredicted RBP16.49■□□□□ 0.23
SMARCE1-209ENST00000478349 TOP1MTQ969P6 601 aa16.49■□□□□ 0.23
SMARCE1-209ENST00000478349 ANO3Q9BYT9 981 aa16.49■□□□□ 0.23
SMARCE1-209ENST00000478349 KCNH7Q9NS40 1196 aa16.49■□□□□ 0.23
SMARCE1-209ENST00000478349 BARHL2Q9NY43 387 aa16.49■□□□□ 0.23
SMARCE1-209ENST00000478349 TRPC6Q9Y210 931 aa16.49■□□□□ 0.23
SMARCE1-209ENST00000478349 RWDD3Q9Y3V2 267 aa16.49■□□□□ 0.23
SMARCE1-209ENST00000478349 V9GY48 417 aaPredicted RBP16.49■□□□□ 0.23
SMARCE1-209ENST00000478349 MBLAC1A4D2B0 266 aaPredicted RBP16.48■□□□□ 0.23
SMARCE1-209ENST00000478349 SMCO2A6NFE2 343 aa16.48■□□□□ 0.23
SMARCE1-209ENST00000478349 ATP9AO75110 1047 aa16.48■□□□□ 0.23
SMARCE1-209ENST00000478349 REC8O95072 547 aa16.48■□□□□ 0.23
SMARCE1-209ENST00000478349 MKRN4PQ13434 485 aaPredicted RBP16.48■□□□□ 0.23
SMARCE1-209ENST00000478349 TCTN1Q2MV58 587 aa16.48■□□□□ 0.23
SMARCE1-209ENST00000478349 TIGD5Q53EQ6 642 aa16.48■□□□□ 0.23
SMARCE1-209ENST00000478349 SUGCTQ9HAC7 445 aa16.48■□□□□ 0.23
SMARCE1-209ENST00000478349 BAZ2BQ9UIF8 2168 aaKnown RBP16.48■□□□□ 0.23
SMARCE1-209ENST00000478349 PRUNE2Q8WUY3 3088 aa16.48■□□□□ 0.23
SMARCE1-209ENST00000478349 GSTTP1A0A1W2PQM5 241 aa16.47■□□□□ 0.23
SMARCE1-209ENST00000478349 STXBP3O00186 592 aa16.47■□□□□ 0.23
SMARCE1-209ENST00000478349 LPXNO60711 386 aa16.47■□□□□ 0.23
SMARCE1-209ENST00000478349 GHRP10912 638 aa16.47■□□□□ 0.23
SMARCE1-209ENST00000478349 SREBF1P36956 1147 aa16.47■□□□□ 0.23
SMARCE1-209ENST00000478349 AKAP17AQ02040 695 aaKnown RBP16.47■□□□□ 0.23
SMARCE1-209ENST00000478349 TFF2Q03403 129 aa16.47■□□□□ 0.23
SMARCE1-209ENST00000478349 FAM160B1Q5W0V3 765 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 166.3 ms