RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 ZNF804BA4D1E1 1349 aa5.64□□□□□ -1.51
SF3B6-202ENST00000478050 CDK5RAP2Q96SN8 1893 aa5.64□□□□□ -1.51
SF3B6-202ENST00000478050 COL4A1P02462 1669 aa5.63□□□□□ -1.51
SF3B6-202ENST00000478050 LY75O60449 1722 aa5.63□□□□□ -1.51
SF3B6-202ENST00000478050 RBM47A0AV96 593 aaKnown RBP5.63□□□□□ -1.51
SF3B6-202ENST00000478050 PRR19A6NJB7 356 aa5.63□□□□□ -1.51
SF3B6-202ENST00000478050 FAM177BA6PVY3 158 aa5.63□□□□□ -1.51
SF3B6-202ENST00000478050 CCP110O43303 1012 aa5.63□□□□□ -1.51
SF3B6-202ENST00000478050 CTIFO43310 598 aaKnown RBP5.63□□□□□ -1.51
SF3B6-202ENST00000478050 PRKAB2O43741 272 aa5.63□□□□□ -1.51
SF3B6-202ENST00000478050 XYLBO75191 536 aa5.63□□□□□ -1.51
SF3B6-202ENST00000478050 SMC2O95347 1197 aa5.63□□□□□ -1.51
SF3B6-202ENST00000478050 TUBB4AP04350 444 aa5.63□□□□□ -1.51
SF3B6-202ENST00000478050 SKILP12757 684 aa5.63□□□□□ -1.51
SF3B6-202ENST00000478050 XBP1P17861 261 aa5.63□□□□□ -1.51
SF3B6-202ENST00000478050 MARCKSP29966 332 aaPredicted RBP5.63□□□□□ -1.51
SF3B6-202ENST00000478050 CD68P34810 354 aaPredicted RBP5.63□□□□□ -1.51
SF3B6-202ENST00000478050 CCZ1BP86790 482 aa5.63□□□□□ -1.51
SF3B6-202ENST00000478050 CCZ1P86791 482 aaPredicted RBP5.63□□□□□ -1.51
SF3B6-202ENST00000478050 AKAP17AQ02040 695 aaKnown RBP5.63□□□□□ -1.51
SF3B6-202ENST00000478050 PPARAQ07869 468 aa5.63□□□□□ -1.51
SF3B6-202ENST00000478050 ZNF211Q13398 564 aaPredicted RBP5.63□□□□□ -1.51
SF3B6-202ENST00000478050 ITPK1Q13572 414 aa5.63□□□□□ -1.51
SF3B6-202ENST00000478050 NCAPHQ15003 741 aa5.63□□□□□ -1.51
SF3B6-202ENST00000478050 SF3B3Q15393 1217 aaKnown RBP5.63□□□□□ -1.51
SF3B6-202ENST00000478050 RRP12Q5JTH9 1297 aaKnown RBP5.63□□□□□ -1.51
SF3B6-202ENST00000478050 SHC4Q6S5L8 630 aa5.63□□□□□ -1.51
SF3B6-202ENST00000478050 DNAJC14Q6Y2X3 702 aaPredicted RBP5.63□□□□□ -1.51
SF3B6-202ENST00000478050 KRBA2Q6ZNG9 492 aa5.63□□□□□ -1.51
SF3B6-202ENST00000478050 ANKRD18AQ8IVF6 992 aa5.63□□□□□ -1.51
SF3B6-202ENST00000478050 NOSTRINQ8IVI9 506 aa5.63□□□□□ -1.51
SF3B6-202ENST00000478050 DIS3L2Q8IYB7 885 aaKnown RBP5.63□□□□□ -1.51
SF3B6-202ENST00000478050 ZNF654Q8IZM8 581 aa5.63□□□□□ -1.51
SF3B6-202ENST00000478050 CRACR2BQ8N4Y2 399 aaPredicted RBP5.63□□□□□ -1.51
SF3B6-202ENST00000478050 ESR2Q92731 530 aa5.63□□□□□ -1.51
SF3B6-202ENST00000478050 ACSBG1Q96GR2 724 aa5.63□□□□□ -1.51
SF3B6-202ENST00000478050 CCDC34Q96HJ3 373 aa5.63□□□□□ -1.51
SF3B6-202ENST00000478050 UBAC1Q9BSL1 405 aa5.63□□□□□ -1.51
SF3B6-202ENST00000478050 BRIP1Q9BX63 1249 aa5.63□□□□□ -1.51
SF3B6-202ENST00000478050 RNF26Q9BY78 433 aaPredicted RBP5.63□□□□□ -1.51
SF3B6-202ENST00000478050 TOMM22Q9NS69 142 aa5.63□□□□□ -1.51
SF3B6-202ENST00000478050 RBM28Q9NW13 759 aaKnown RBP5.63□□□□□ -1.51
SF3B6-202ENST00000478050 IFNKQ9P0W0 207 aa5.63□□□□□ -1.51
SF3B6-202ENST00000478050 TRIM33Q9UPN9 1127 aa5.63□□□□□ -1.51
SF3B6-202ENST00000478050 RTCBQ9Y3I0 505 aaKnown RBP5.63□□□□□ -1.51
SF3B6-202ENST00000478050 TACC3Q9Y6A5 838 aa5.63□□□□□ -1.51
SF3B6-202ENST00000478050 PDS5AQ29RF7 1337 aaKnown RBP5.63□□□□□ -1.51
SF3B6-202ENST00000478050 A0A087WWV3 80 aa5.62□□□□□ -1.51
SF3B6-202ENST00000478050 H3BRB1 525 aa5.62□□□□□ -1.51
SF3B6-202ENST00000478050 LINC01387J3KSC0 135 aa5.62□□□□□ -1.51
SF3B6-202ENST00000478050 BIN1O00499 593 aa5.62□□□□□ -1.51
SF3B6-202ENST00000478050 SART1O43290 800 aaKnown RBP5.62□□□□□ -1.51
SF3B6-202ENST00000478050 DDAH1O94760 285 aa5.62□□□□□ -1.51
SF3B6-202ENST00000478050 BMP15O95972 392 aa5.62□□□□□ -1.51
SF3B6-202ENST00000478050 CALM1P0DP23 149 aa5.62□□□□□ -1.51
SF3B6-202ENST00000478050 CALM2P0DP24 149 aa5.62□□□□□ -1.51
SF3B6-202ENST00000478050 CALM3P0DP25 149 aa5.62□□□□□ -1.51
SF3B6-202ENST00000478050 ERCC3P19447 782 aa5.62□□□□□ -1.51
SF3B6-202ENST00000478050 NT5C2P49902 561 aa5.62□□□□□ -1.51
SF3B6-202ENST00000478050 FANCCQ00597 558 aa5.62□□□□□ -1.51
SF3B6-202ENST00000478050 MYL5Q02045 173 aa5.62□□□□□ -1.51
SF3B6-202ENST00000478050 SEC23AQ15436 765 aa5.62□□□□□ -1.51
SF3B6-202ENST00000478050 PTPN14Q15678 1187 aa5.62□□□□□ -1.51
SF3B6-202ENST00000478050 CAVIN4Q5BKX8 364 aa5.62□□□□□ -1.51
SF3B6-202ENST00000478050 CT47A1Q5JQC4 288 aaPredicted RBP5.62□□□□□ -1.51
SF3B6-202ENST00000478050 SLC10A5Q5PT55 438 aa5.62□□□□□ -1.51
SF3B6-202ENST00000478050 CEP135Q66GS9 1140 aa5.62□□□□□ -1.51
SF3B6-202ENST00000478050 OGFOD2Q6N063 350 aa5.62□□□□□ -1.51
SF3B6-202ENST00000478050 TMC6Q7Z403 805 aa5.62□□□□□ -1.51
SF3B6-202ENST00000478050 FILIP1Q7Z7B0 1213 aa5.62□□□□□ -1.51
SF3B6-202ENST00000478050 COL23A1Q86Y22 540 aaPredicted RBP5.62□□□□□ -1.51
SF3B6-202ENST00000478050 CLEC10AQ8IUN9 316 aa5.62□□□□□ -1.51
SF3B6-202ENST00000478050 CCAR2Q8N163 923 aaKnown RBP5.62□□□□□ -1.51
SF3B6-202ENST00000478050 CMTR1Q8N1G2 835 aaKnown RBP5.62□□□□□ -1.51
SF3B6-202ENST00000478050 TRIML1Q8N9V2 468 aa5.62□□□□□ -1.51
SF3B6-202ENST00000478050 CNNM3Q8NE01 707 aa5.62□□□□□ -1.51
SF3B6-202ENST00000478050 CCDC112Q8NEF3 446 aa5.62□□□□□ -1.51
SF3B6-202ENST00000478050 SHKBP1Q8TBC3 707 aa5.62□□□□□ -1.51
SF3B6-202ENST00000478050 ANKRD7Q92527 254 aa5.62□□□□□ -1.51
SF3B6-202ENST00000478050 ERCC4Q92889 916 aaPredicted RBP5.62□□□□□ -1.51
SF3B6-202ENST00000478050 VTI1AQ96AJ9 217 aa5.62□□□□□ -1.51
SF3B6-202ENST00000478050 C16orf45Q96MC5 204 aaPredicted RBP5.62□□□□□ -1.51
SF3B6-202ENST00000478050 MYL10Q9BUA6 226 aa5.62□□□□□ -1.51
SF3B6-202ENST00000478050 MKNK1Q9BUB5 465 aa5.62□□□□□ -1.51
SF3B6-202ENST00000478050 CCDC94Q9BW85 323 aaPredicted RBP5.62□□□□□ -1.51
SF3B6-202ENST00000478050 XPO4Q9C0E2 1151 aaKnown RBP5.62□□□□□ -1.51
SF3B6-202ENST00000478050 NYXQ9GZU5 481 aa5.62□□□□□ -1.51
SF3B6-202ENST00000478050 TUT1Q9H6E5 874 aaKnown RBP5.62□□□□□ -1.51
SF3B6-202ENST00000478050 INCENPQ9NQS7 918 aa5.62□□□□□ -1.51
SF3B6-202ENST00000478050 BSDC1Q9NW68 430 aaPredicted RBP5.62□□□□□ -1.51
SF3B6-202ENST00000478050 RAI14Q9P0K7 980 aa5.62□□□□□ -1.51
SF3B6-202ENST00000478050 CXXC1Q9P0U4 656 aaPredicted RBP5.62□□□□□ -1.51
SF3B6-202ENST00000478050 KCNH3Q9ULD8 1083 aa5.62□□□□□ -1.51
SF3B6-202ENST00000478050 CNTNAP4Q9C0A0 1308 aa5.62□□□□□ -1.51
SF3B6-202ENST00000478050 COL1A1P02452 1464 aaPredicted RBP5.62□□□□□ -1.51
SF3B6-202ENST00000478050 MYH8P13535 1937 aa5.62□□□□□ -1.51
SF3B6-202ENST00000478050 MINDY4BA8MYZ0 360 aa5.61□□□□□ -1.51
SF3B6-202ENST00000478050 WDR64B1ANS9 1081 aa5.61□□□□□ -1.51
SF3B6-202ENST00000478050 BTBD18B2RXH4 712 aa5.61□□□□□ -1.51
SF3B6-202ENST00000478050 SNAP23O00161 211 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms