RNA–Protein interactions for RNA: ENST00000478016.1

FNDC3B-209, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 4

Gene FNDC3B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-209ENST00000478016 TPM2P07951 284 aa4.13□□□□□ -1.75
FNDC3B-209ENST00000478016 GLI1P08151 1106 aa4.13□□□□□ -1.75
FNDC3B-209ENST00000478016 NBPF7P0C2Y1 421 aaPredicted RBP4.13□□□□□ -1.75
FNDC3B-209ENST00000478016 TNNT2P45379 298 aaPredicted RBP4.13□□□□□ -1.75
FNDC3B-209ENST00000478016 EXOSC10Q01780 885 aaKnown RBP4.13□□□□□ -1.75
FNDC3B-209ENST00000478016 RASGRF1Q13972 1273 aa4.13□□□□□ -1.75
FNDC3B-209ENST00000478016 SLC10A5Q5PT55 438 aa4.13□□□□□ -1.75
FNDC3B-209ENST00000478016 C16orf87Q6PH81 154 aa4.13□□□□□ -1.75
FNDC3B-209ENST00000478016 SLCO6A1Q86UG4 719 aa4.13□□□□□ -1.75
FNDC3B-209ENST00000478016 C11orf74Q86VG3 221 aa4.13□□□□□ -1.75
FNDC3B-209ENST00000478016 TTC30AQ86WT1 665 aa4.13□□□□□ -1.75
FNDC3B-209ENST00000478016 RAVER1Q8IY67 606 aaKnown RBP4.13□□□□□ -1.75
FNDC3B-209ENST00000478016 LRRC47Q8N1G4 583 aaKnown RBP4.13□□□□□ -1.75
FNDC3B-209ENST00000478016 TEX9Q8N6V9 391 aa4.13□□□□□ -1.75
FNDC3B-209ENST00000478016 BTN2A2Q8WVV5 523 aa4.13□□□□□ -1.75
FNDC3B-209ENST00000478016 CENPTQ96BT3 561 aa4.13□□□□□ -1.75
FNDC3B-209ENST00000478016 TBC1D20Q96BZ9 403 aa4.13□□□□□ -1.75
FNDC3B-209ENST00000478016 DEPDC7Q96QD5 511 aa4.13□□□□□ -1.75
FNDC3B-209ENST00000478016 RNF32Q9H0A6 362 aa4.13□□□□□ -1.75
FNDC3B-209ENST00000478016 NKX2-4Q9H2Z4 354 aa4.13□□□□□ -1.75
FNDC3B-209ENST00000478016 CD248Q9HCU0 757 aa4.13□□□□□ -1.75
FNDC3B-209ENST00000478016 NGRNQ9NPE2 291 aaKnown RBP4.13□□□□□ -1.75
FNDC3B-209ENST00000478016 KMT5AQ9NQR1 393 aa4.13□□□□□ -1.75
FNDC3B-209ENST00000478016 CYP26B1Q9NR63 512 aa4.13□□□□□ -1.75
FNDC3B-209ENST00000478016 COMMD8Q9NX08 183 aa4.13□□□□□ -1.75
FNDC3B-209ENST00000478016 STK26Q9P289 416 aa4.13□□□□□ -1.75
FNDC3B-209ENST00000478016 GPR160Q9UJ42 338 aa4.13□□□□□ -1.75
FNDC3B-209ENST00000478016 MRPS23Q9Y3D9 190 aaKnown RBP4.13□□□□□ -1.75
FNDC3B-209ENST00000478016 TAF6LQ9Y6J9 622 aa4.13□□□□□ -1.75
FNDC3B-209ENST00000478016 CARMIL2Q6F5E8 1435 aa4.12□□□□□ -1.75
FNDC3B-209ENST00000478016 ZNF608Q9ULD9 1512 aaPredicted RBP4.12□□□□□ -1.75
FNDC3B-209ENST00000478016 TRBV23OR9-2A0A075B6M9 112 aa4.12□□□□□ -1.75
FNDC3B-209ENST00000478016 A0A1W2PQU0 124 aa4.12□□□□□ -1.75
FNDC3B-209ENST00000478016 GTPBP10A4D1E9 387 aaKnown RBP4.12□□□□□ -1.75
FNDC3B-209ENST00000478016 NOTOA8MTQ0 251 aa4.12□□□□□ -1.75
FNDC3B-209ENST00000478016 FAM25EA8MYX2 175 aa4.12□□□□□ -1.75
FNDC3B-209ENST00000478016 NPHP1O15259 732 aa4.12□□□□□ -1.75
FNDC3B-209ENST00000478016 TBX1O43435 398 aa4.12□□□□□ -1.75
FNDC3B-209ENST00000478016 SLC26A4O43511 780 aa4.12□□□□□ -1.75
FNDC3B-209ENST00000478016 IPO7O95373 1038 aaKnown RBP4.12□□□□□ -1.75
FNDC3B-209ENST00000478016 HOXD10P28358 340 aa4.12□□□□□ -1.75
FNDC3B-209ENST00000478016 HOXC12P31275 282 aa4.12□□□□□ -1.75
FNDC3B-209ENST00000478016 CEBPAP49715 358 aaPredicted RBP4.12□□□□□ -1.75
FNDC3B-209ENST00000478016 ZNF131P52739 623 aa4.12□□□□□ -1.75
FNDC3B-209ENST00000478016 PPP2R2AP63151 447 aa4.12□□□□□ -1.75
FNDC3B-209ENST00000478016 CCT2P78371 535 aaKnown RBP4.12□□□□□ -1.75
FNDC3B-209ENST00000478016 GPSM2P81274 684 aa4.12□□□□□ -1.75
FNDC3B-209ENST00000478016 SCRN1Q12765 414 aa4.12□□□□□ -1.75
FNDC3B-209ENST00000478016 TRIM29Q14134 588 aa4.12□□□□□ -1.75
FNDC3B-209ENST00000478016 PPP2R5AQ15172 486 aa4.12□□□□□ -1.75
FNDC3B-209ENST00000478016 E2F5Q15329 346 aa4.12□□□□□ -1.75
FNDC3B-209ENST00000478016 GRAMD1BQ3KR37 738 aa4.12□□□□□ -1.75
FNDC3B-209ENST00000478016 MTERF2Q49AM1 385 aa4.12□□□□□ -1.75
FNDC3B-209ENST00000478016 HSF5Q4G112 596 aaPredicted RBP4.12□□□□□ -1.75
FNDC3B-209ENST00000478016 AMOTQ4VCS5 1084 aa4.12□□□□□ -1.75
FNDC3B-209ENST00000478016 TIGD5Q53EQ6 642 aa4.12□□□□□ -1.75
FNDC3B-209ENST00000478016 WDR45BQ5MNZ6 344 aa4.12□□□□□ -1.75
FNDC3B-209ENST00000478016 C10orf62Q5T681 223 aaPredicted RBP4.12□□□□□ -1.75
FNDC3B-209ENST00000478016 KIAA1614Q5VZ46 1190 aa4.12□□□□□ -1.75
FNDC3B-209ENST00000478016 JAKMIP3Q5VZ66 844 aa4.12□□□□□ -1.75
FNDC3B-209ENST00000478016 ERAP2Q6P179 960 aa4.12□□□□□ -1.75
FNDC3B-209ENST00000478016 GALNT18Q6P9A2 607 aa4.12□□□□□ -1.75
FNDC3B-209ENST00000478016 C16orf54Q6UWD8 224 aa4.12□□□□□ -1.75
FNDC3B-209ENST00000478016 NLRX1Q86UT6 975 aa4.12□□□□□ -1.75
FNDC3B-209ENST00000478016 JAMLQ86YT9 394 aa4.12□□□□□ -1.75
FNDC3B-209ENST00000478016 SAMD14Q8IZD0 417 aaPredicted RBP4.12□□□□□ -1.75
FNDC3B-209ENST00000478016 CCDC191Q8NCU4 936 aa4.12□□□□□ -1.75
FNDC3B-209ENST00000478016 TMEM52Q8NDY8 209 aa4.12□□□□□ -1.75
FNDC3B-209ENST00000478016 ATXN2LQ8WWM7 1075 aaKnown RBP4.12□□□□□ -1.75
FNDC3B-209ENST00000478016 COPS5Q92905 334 aa4.12□□□□□ -1.75
FNDC3B-209ENST00000478016 E2F7Q96AV8 911 aa4.12□□□□□ -1.75
FNDC3B-209ENST00000478016 PGBD4Q96DM1 585 aa4.12□□□□□ -1.75
FNDC3B-209ENST00000478016 CCDC140Q96MF4 163 aa4.12□□□□□ -1.75
FNDC3B-209ENST00000478016 XPO4Q9C0E2 1151 aaKnown RBP4.12□□□□□ -1.75
FNDC3B-209ENST00000478016 RIC8AQ9NPQ8 531 aa4.12□□□□□ -1.75
FNDC3B-209ENST00000478016 HOMER2Q9NSB8 354 aa4.12□□□□□ -1.75
FNDC3B-209ENST00000478016 EPS15L1Q9UBC2 864 aa4.12□□□□□ -1.75
FNDC3B-209ENST00000478016 IL16Q14005 1332 aa4.12□□□□□ -1.75
FNDC3B-209ENST00000478016 CCDC88BA6NC98 1476 aa4.11□□□□□ -1.75
FNDC3B-209ENST00000478016 TOPBP1Q92547 1522 aa4.11□□□□□ -1.75
FNDC3B-209ENST00000478016 DNMBPQ6XZF7 1577 aa4.11□□□□□ -1.75
FNDC3B-209ENST00000478016 RIMBP3CA6NJZ7 1639 aa4.11□□□□□ -1.75
FNDC3B-209ENST00000478016 RIMBP3BA6NNM3 1639 aa4.11□□□□□ -1.75
FNDC3B-209ENST00000478016 RIMBP3Q9UFD9 1639 aa4.11□□□□□ -1.75
FNDC3B-209ENST00000478016 NPHP3-ACAD11A0A0J9YXS1 232 aa4.11□□□□□ -1.75
FNDC3B-209ENST00000478016 DYTNA2CJ06 578 aa4.11□□□□□ -1.75
FNDC3B-209ENST00000478016 PRSS47A8MTI9 375 aa4.11□□□□□ -1.75
FNDC3B-209ENST00000478016 VGLL3A8MV65 326 aa4.11□□□□□ -1.75
FNDC3B-209ENST00000478016 C19orf81C9J6K1 198 aa4.11□□□□□ -1.75
FNDC3B-209ENST00000478016 PAX4O43316 350 aa4.11□□□□□ -1.75
FNDC3B-209ENST00000478016 PSPNO60542 156 aa4.11□□□□□ -1.75
FNDC3B-209ENST00000478016 CPP00450 1065 aa4.11□□□□□ -1.75
FNDC3B-209ENST00000478016 SNRPB2P08579 225 aaKnown RBP4.11□□□□□ -1.75
FNDC3B-209ENST00000478016 SKILP12757 684 aa4.11□□□□□ -1.75
FNDC3B-209ENST00000478016 NCAM1P13591 858 aa4.11□□□□□ -1.75
FNDC3B-209ENST00000478016 PAMP19021 973 aa4.11□□□□□ -1.75
FNDC3B-209ENST00000478016 ABCD1P33897 745 aa4.11□□□□□ -1.75
FNDC3B-209ENST00000478016 EPHB1P54762 984 aa4.11□□□□□ -1.75
FNDC3B-209ENST00000478016 GEMIN4P57678 1058 aaKnown RBP4.11□□□□□ -1.75
FNDC3B-209ENST00000478016 INHBEP58166 350 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms