RNA–Protein interactions for RNA: ENST00000477541.1

HLA-DMA-208, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

Gene HLA-DMA, Length 1,735 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-208ENST00000477541 SCFD2Q8WU76 684 aa14.86□□□□□ -0.03
HLA-DMA-208ENST00000477541 ZBTB9Q96C00 473 aa14.86□□□□□ -0.03
HLA-DMA-208ENST00000477541 TANGO6Q9C0B7 1094 aa14.86□□□□□ -0.03
HLA-DMA-208ENST00000477541 NYXQ9GZU5 481 aa14.86□□□□□ -0.03
HLA-DMA-208ENST00000477541 SLITRK6Q9H5Y7 841 aa14.86□□□□□ -0.03
HLA-DMA-208ENST00000477541 INTUQ9ULD6 942 aa14.86□□□□□ -0.03
HLA-DMA-208ENST00000477541 SAMM50Q9Y512 469 aa14.86□□□□□ -0.03
HLA-DMA-208ENST00000477541 A0A0A6YYK5 440 aaPredicted RBP14.85□□□□□ -0.03
HLA-DMA-208ENST00000477541 LOC102724428A0A0B4J2F2 783 aa14.85□□□□□ -0.03
HLA-DMA-208ENST00000477541 BUB1O43683 1085 aa14.85□□□□□ -0.03
HLA-DMA-208ENST00000477541 NOL4O94818 638 aa14.85□□□□□ -0.03
HLA-DMA-208ENST00000477541 USP17L8P0C7I0 530 aa14.85□□□□□ -0.03
HLA-DMA-208ENST00000477541 GCFC2P16383 781 aaKnown RBP14.85□□□□□ -0.03
HLA-DMA-208ENST00000477541 SIK1P57059 783 aa14.85□□□□□ -0.03
HLA-DMA-208ENST00000477541 CLUL1Q15846 466 aa14.85□□□□□ -0.03
HLA-DMA-208ENST00000477541 ASIC2Q16515 512 aa14.85□□□□□ -0.03
HLA-DMA-208ENST00000477541 PLCD3Q8N3E9 789 aa14.85□□□□□ -0.03
HLA-DMA-208ENST00000477541 NEDD1Q8NHV4 660 aa14.85□□□□□ -0.03
HLA-DMA-208ENST00000477541 MAGEC3Q8TD91 643 aa14.85□□□□□ -0.03
HLA-DMA-208ENST00000477541 IFT81Q8WYA0 676 aa14.85□□□□□ -0.03
HLA-DMA-208ENST00000477541 KRT12Q99456 494 aa14.85□□□□□ -0.03
HLA-DMA-208ENST00000477541 SGIP1Q9BQI5 828 aa14.85□□□□□ -0.03
HLA-DMA-208ENST00000477541 FBXL5Q9UKA1 691 aa14.85□□□□□ -0.03
HLA-DMA-208ENST00000477541 PLAAQ9Y263 795 aa14.85□□□□□ -0.03
HLA-DMA-208ENST00000477541 MYH4Q9Y623 1939 aa14.85□□□□□ -0.03
HLA-DMA-208ENST00000477541 CDK5RAP2Q96SN8 1893 aa14.84□□□□□ -0.03
HLA-DMA-208ENST00000477541 C5orf60A6NFR6 353 aa14.84□□□□□ -0.03
HLA-DMA-208ENST00000477541 TLR2O60603 784 aa14.84□□□□□ -0.03
HLA-DMA-208ENST00000477541 GFPT2O94808 682 aa14.84□□□□□ -0.03
HLA-DMA-208ENST00000477541 FAM153BP0C7A2 387 aa14.84□□□□□ -0.03
HLA-DMA-208ENST00000477541 PRDX5P30044 214 aa14.84□□□□□ -0.03
HLA-DMA-208ENST00000477541 ATP1A2P50993 1020 aa14.84□□□□□ -0.03
HLA-DMA-208ENST00000477541 NPEPPSP55786 919 aa14.84□□□□□ -0.03
HLA-DMA-208ENST00000477541 RPS8P62241 208 aaKnown RBP14.84□□□□□ -0.03
HLA-DMA-208ENST00000477541 FAM153CQ494X1 144 aa14.84□□□□□ -0.03
HLA-DMA-208ENST00000477541 CCDC65Q8IXS2 484 aa14.84□□□□□ -0.03
HLA-DMA-208ENST00000477541 SH2D3CQ8N5H7 860 aa14.84□□□□□ -0.03
HLA-DMA-208ENST00000477541 DDX12PQ92771 950 aa14.84□□□□□ -0.03
HLA-DMA-208ENST00000477541 LSM14BQ9BX40 385 aaKnown RBP14.84□□□□□ -0.03
HLA-DMA-208ENST00000477541 RIOX1Q9H6W3 641 aa14.84□□□□□ -0.03
HLA-DMA-208ENST00000477541 CNOT10Q9H9A5 744 aaKnown RBP14.84□□□□□ -0.03
HLA-DMA-208ENST00000477541 FAM153AQ9UHL3 310 aa14.84□□□□□ -0.03
HLA-DMA-208ENST00000477541 RAD51CO43502 376 aa14.83□□□□□ -0.03
HLA-DMA-208ENST00000477541 KIF4AO95239 1232 aa14.83□□□□□ -0.03
HLA-DMA-208ENST00000477541 RASA1P20936 1047 aa14.83□□□□□ -0.03
HLA-DMA-208ENST00000477541 KLRC1P26715 233 aa14.83□□□□□ -0.03
HLA-DMA-208ENST00000477541 MAP2K2P36507 400 aa14.83□□□□□ -0.03
HLA-DMA-208ENST00000477541 TXKP42681 527 aa14.83□□□□□ -0.03
HLA-DMA-208ENST00000477541 EIF3BP55884 814 aaKnown RBP14.83□□□□□ -0.03
HLA-DMA-208ENST00000477541 IFFO1Q0D2I5 559 aa14.83□□□□□ -0.03
HLA-DMA-208ENST00000477541 KLHL30Q0D2K2 578 aa14.83□□□□□ -0.03
HLA-DMA-208ENST00000477541 COASYQ13057 564 aa14.83□□□□□ -0.03
HLA-DMA-208ENST00000477541 KIAA0753Q2KHM9 967 aa14.83□□□□□ -0.03
HLA-DMA-208ENST00000477541 ERFEQ4G0M1 354 aa14.83□□□□□ -0.03
HLA-DMA-208ENST00000477541 FAM26FQ5R3K3 315 aa14.83□□□□□ -0.03
HLA-DMA-208ENST00000477541 CEP85LQ5SZL2 805 aa14.83□□□□□ -0.03
HLA-DMA-208ENST00000477541 FBXW10Q5XX13 1052 aa14.83□□□□□ -0.03
HLA-DMA-208ENST00000477541 CCDC121Q6ZUS5 278 aa14.83□□□□□ -0.03
HLA-DMA-208ENST00000477541 MAATS1Q7Z4T9 603 aa14.83□□□□□ -0.03
HLA-DMA-208ENST00000477541 SYCE1Q8N0S2 351 aa14.83□□□□□ -0.03
HLA-DMA-208ENST00000477541 SNX29Q8TEQ0 813 aa14.83□□□□□ -0.03
HLA-DMA-208ENST00000477541 SEC14L1Q92503 715 aa14.83□□□□□ -0.03
HLA-DMA-208ENST00000477541 MS4A14Q96JA4 679 aa14.83□□□□□ -0.03
HLA-DMA-208ENST00000477541 PSMB7Q99436 277 aa14.83□□□□□ -0.03
HLA-DMA-208ENST00000477541 MTFR1LQ9H019 292 aa14.83□□□□□ -0.03
HLA-DMA-208ENST00000477541 EHD2Q9NZN4 543 aa14.83□□□□□ -0.03
HLA-DMA-208ENST00000477541 SWAP70Q9UH65 585 aa14.83□□□□□ -0.03
HLA-DMA-208ENST00000477541 ATF5Q9Y2D1 282 aaPredicted RBP14.83□□□□□ -0.03
HLA-DMA-208ENST00000477541 DIS3Q9Y2L1 958 aaKnown RBP14.83□□□□□ -0.03
HLA-DMA-208ENST00000477541 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.83□□□□□ -0.03
HLA-DMA-208ENST00000477541 PLIN4Q96Q06 1357 aa14.83□□□□□ -0.04
HLA-DMA-208ENST00000477541 GMNCA6NCL1 334 aa14.83□□□□□ -0.04
HLA-DMA-208ENST00000477541 PGRMC1O00264 195 aaKnown RBP14.83□□□□□ -0.04
HLA-DMA-208ENST00000477541 TRAF5O00463 557 aa14.83□□□□□ -0.04
HLA-DMA-208ENST00000477541 LDHBP07195 334 aaKnown RBP14.83□□□□□ -0.04
HLA-DMA-208ENST00000477541 TAF1P21675 1872 aa14.83□□□□□ -0.04
HLA-DMA-208ENST00000477541 PRKCIP41743 596 aa14.83□□□□□ -0.04
HLA-DMA-208ENST00000477541 ADCY7P51828 1080 aa14.83□□□□□ -0.04
HLA-DMA-208ENST00000477541 GUCY1A3Q02108 690 aa14.83□□□□□ -0.04
HLA-DMA-208ENST00000477541 EVX2Q03828 476 aa14.83□□□□□ -0.04
HLA-DMA-208ENST00000477541 KCTD16Q68DU8 428 aa14.83□□□□□ -0.04
HLA-DMA-208ENST00000477541 C16orf86Q6ZW13 317 aa14.83□□□□□ -0.04
HLA-DMA-208ENST00000477541 CROCCP2Q86T23 111 aa14.83□□□□□ -0.04
HLA-DMA-208ENST00000477541 CCDC26Q8TAB7 109 aa14.83□□□□□ -0.04
HLA-DMA-208ENST00000477541 SNED1Q8TER0 1413 aa14.83□□□□□ -0.04
HLA-DMA-208ENST00000477541 TBC1D5Q92609 795 aa14.83□□□□□ -0.04
HLA-DMA-208ENST00000477541 DNAJC19Q96DA6 116 aa14.83□□□□□ -0.04
HLA-DMA-208ENST00000477541 EEF2KMTQ96G04 330 aa14.83□□□□□ -0.04
HLA-DMA-208ENST00000477541 GANQ9H2C0 597 aa14.83□□□□□ -0.04
HLA-DMA-208ENST00000477541 FAM114A2Q9NRY5 505 aa14.83□□□□□ -0.04
HLA-DMA-208ENST00000477541 SMARCAL1Q9NZC9 954 aa14.83□□□□□ -0.04
HLA-DMA-208ENST00000477541 SLC12A6Q9UHW9 1150 aa14.83□□□□□ -0.04
HLA-DMA-208ENST00000477541 STX8Q9UNK0 236 aa14.83□□□□□ -0.04
HLA-DMA-208ENST00000477541 PITPNM2Q9BZ72 1349 aa14.82□□□□□ -0.04
HLA-DMA-208ENST00000477541 IRS2Q9Y4H2 1338 aa14.82□□□□□ -0.04
HLA-DMA-208ENST00000477541 SBF2Q86WG5 1849 aa14.82□□□□□ -0.04
HLA-DMA-208ENST00000477541 USP17L3A6NCW0 530 aa14.82□□□□□ -0.04
HLA-DMA-208ENST00000477541 USP17L4A6NCW7 530 aa14.82□□□□□ -0.04
HLA-DMA-208ENST00000477541 H0YGN5 161 aa14.82□□□□□ -0.04
HLA-DMA-208ENST00000477541 TRAPPC3O43617 180 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms