RNA–Protein interactions for RNA: ENST00000477538.1

VHL-203, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best)

Gene VHL, Length 958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-203ENST00000477538 SFNP31947 248 aa18.21■□□□□ 0.51
VHL-203ENST00000477538 JAK3P52333 1124 aa18.21■□□□□ 0.51
VHL-203ENST00000477538 ACTR2P61160 394 aa18.21■□□□□ 0.51
VHL-203ENST00000477538 SMAP1Q8IYB5 467 aaPredicted RBP18.21■□□□□ 0.51
VHL-203ENST00000477538 AK8Q96MA6 479 aa18.21■□□□□ 0.51
VHL-203ENST00000477538 SPATA33Q96N06 139 aa18.21■□□□□ 0.51
VHL-203ENST00000477538 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.21■□□□□ 0.519e-8■■■■■ 35.1
VHL-203ENST00000477538 AP5M1Q9H0R1 490 aa18.21■□□□□ 0.51
VHL-203ENST00000477538 DDX20Q9UHI6 824 aaKnown RBP18.21■□□□□ 0.51
VHL-203ENST00000477538 Q9Y3F1 56 aa18.21■□□□□ 0.51
VHL-203ENST00000477538 TELO2Q9Y4R8 837 aa18.21■□□□□ 0.51
VHL-203ENST00000477538 SAMM50Q9Y512 469 aa18.21■□□□□ 0.51
VHL-203ENST00000477538 TRIP12Q14669 1992 aaPredicted RBP18.21■□□□□ 0.5
VHL-203ENST00000477538 PP2D1A8MPX8 630 aa18.2■□□□□ 0.5
VHL-203ENST00000477538 GOLGA6L22H0YM25 854 aa18.2■□□□□ 0.5
VHL-203ENST00000477538 DYNC1LI2O43237 492 aaPredicted RBP18.2■□□□□ 0.5
VHL-203ENST00000477538 MSCO60682 206 aa18.2■□□□□ 0.5
VHL-203ENST00000477538 HSDL1Q3SXM5 330 aa18.2■□□□□ 0.5
VHL-203ENST00000477538 SPECC1Q5M775 1068 aa18.2■□□□□ 0.5
VHL-203ENST00000477538 ADALQ6DHV7 355 aa18.2■□□□□ 0.5
VHL-203ENST00000477538 ZNF579Q8NAF0 562 aaKnown RBP18.2■□□□□ 0.5
VHL-203ENST00000477538 RDM1Q8NG50 284 aa18.2■□□□□ 0.5
VHL-203ENST00000477538 PPTC7Q8NI37 304 aa18.2■□□□□ 0.5
VHL-203ENST00000477538 ERMNQ8TAM6 284 aa18.2■□□□□ 0.5
VHL-203ENST00000477538 UNC93B1Q9H1C4 597 aa18.2■□□□□ 0.5
VHL-203ENST00000477538 DISC1Q9NRI5 854 aa18.2■□□□□ 0.5
VHL-203ENST00000477538 EVPLQ92817 2033 aa18.2■□□□□ 0.5
VHL-203ENST00000477538 KIAA0100Q14667 2235 aaKnown RBP18.19■□□□□ 0.5
VHL-203ENST00000477538 SCN10AQ9Y5Y9 1956 aa18.19■□□□□ 0.5
VHL-203ENST00000477538 GSTTP1A0A1W2PQM5 241 aa18.19■□□□□ 0.5
VHL-203ENST00000477538 POTEFA5A3E0 1075 aa18.19■□□□□ 0.5
VHL-203ENST00000477538 GOLGA6L4A6NEF3 574 aa18.19■□□□□ 0.5
VHL-203ENST00000477538 EPHA7Q15375 998 aa18.19■□□□□ 0.5
VHL-203ENST00000477538 TPRNQ4KMQ1 711 aa18.19■□□□□ 0.5
VHL-203ENST00000477538 AFG1LQ8WV93 481 aa18.19■□□□□ 0.5
VHL-203ENST00000477538 SEPT1Q8WYJ6 367 aa18.19■□□□□ 0.5
VHL-203ENST00000477538 GPR20Q99678 358 aa18.19■□□□□ 0.5
VHL-203ENST00000477538 UPF3AQ9H1J1 476 aaKnown RBP18.19■□□□□ 0.5
VHL-203ENST00000477538 PCDHA10Q9Y5I2 948 aa18.19■□□□□ 0.5
VHL-203ENST00000477538 SYNRGQ9UMZ2 1314 aa18.19■□□□□ 0.5
VHL-203ENST00000477538 PRPF40AO75400 957 aaKnown RBP18.18■□□□□ 0.5
VHL-203ENST00000477538 ATG7O95352 703 aa18.18■□□□□ 0.5
VHL-203ENST00000477538 MYCP01106 439 aaPredicted RBP18.18■□□□□ 0.5
VHL-203ENST00000477538 PSAPP07602 524 aa18.18■□□□□ 0.5
VHL-203ENST00000477538 MMP3P08254 477 aa18.18■□□□□ 0.5
VHL-203ENST00000477538 SUPT20HL2P0C7V6 817 aa18.18■□□□□ 0.5
VHL-203ENST00000477538 CCL5P13501 91 aa18.18■□□□□ 0.5
VHL-203ENST00000477538 CDC25AP30304 524 aa18.18■□□□□ 0.5
VHL-203ENST00000477538 TCF7P36402 384 aaPredicted RBP18.18■□□□□ 0.5
VHL-203ENST00000477538 GJA9P57773 515 aa18.18■□□□□ 0.5
VHL-203ENST00000477538 MTFR1Q15390 333 aa18.18■□□□□ 0.5
VHL-203ENST00000477538 KRT79Q5XKE5 535 aa18.18■□□□□ 0.5
VHL-203ENST00000477538 HAUS3Q68CZ6 603 aa18.18■□□□□ 0.5
VHL-203ENST00000477538 MIS18BP1Q6P0N0 1132 aa18.18■□□□□ 0.5
VHL-203ENST00000477538 SHC4Q6S5L8 630 aa18.18■□□□□ 0.5
VHL-203ENST00000477538 ABHD15Q6UXT9 468 aa18.18■□□□□ 0.5
VHL-203ENST00000477538 SNX29Q8TEQ0 813 aa18.18■□□□□ 0.5
VHL-203ENST00000477538 SYMPKQ92797 1274 aaKnown RBP18.18■□□□□ 0.5
VHL-203ENST00000477538 ARMC5Q96C12 935 aa18.18■□□□□ 0.5
VHL-203ENST00000477538 EPSTI1Q96J88 318 aa18.18■□□□□ 0.5
VHL-203ENST00000477538 ZNF333Q96JL9 665 aa18.18■□□□□ 0.5
VHL-203ENST00000477538 EIF2AK1Q9BQI3 630 aaKnown RBP18.18■□□□□ 0.5
VHL-203ENST00000477538 SPC25Q9HBM1 224 aa18.18■□□□□ 0.5
VHL-203ENST00000477538 XPNPEP3Q9NQH7 507 aa18.18■□□□□ 0.5
VHL-203ENST00000477538 STK24Q9Y6E0 443 aa18.18■□□□□ 0.5
VHL-203ENST00000477538 A0A1W2PQ27 194 aa18.17■□□□□ 0.5
VHL-203ENST00000477538 A0A1W2PQ64 194 aa18.17■□□□□ 0.5
VHL-203ENST00000477538 A0A1W2PQD8 194 aa18.17■□□□□ 0.5
VHL-203ENST00000477538 A6NJR5 290 aa18.17■□□□□ 0.5
VHL-203ENST00000477538 PGK1P00558 417 aa18.17■□□□□ 0.5
VHL-203ENST00000477538 C6orf222P0C671 652 aaPredicted RBP18.17■□□□□ 0.5
VHL-203ENST00000477538 TXLNAP40222 546 aa18.17■□□□□ 0.5
VHL-203ENST00000477538 UBA7P41226 1012 aa18.17■□□□□ 0.5
VHL-203ENST00000477538 CPT1AP50416 773 aa18.17■□□□□ 0.5
VHL-203ENST00000477538 BRDTQ58F21 947 aaPredicted RBP18.17■□□□□ 0.5
VHL-203ENST00000477538 RESP18Q5W5W9 173 aa18.17■□□□□ 0.5
VHL-203ENST00000477538 USP49Q70CQ1 688 aa18.17■□□□□ 0.5
VHL-203ENST00000477538 CABP7Q86V35 215 aa18.17■□□□□ 0.5
VHL-203ENST00000477538 NEK9Q8TD19 979 aa18.17■□□□□ 0.5
VHL-203ENST00000477538 MMTAG2Q9BU76 263 aaKnown RBP18.17■□□□□ 0.5
VHL-203ENST00000477538 CCSER1Q9C0I3 900 aa18.17■□□□□ 0.5
VHL-203ENST00000477538 MCOLN1Q9GZU1 580 aa18.17■□□□□ 0.5
VHL-203ENST00000477538 PAK6Q9NQU5 681 aaPredicted RBP18.17■□□□□ 0.5
VHL-203ENST00000477538 BACH1O14867 736 aa18.16■□□□□ 0.5
VHL-203ENST00000477538 ADAMTS4O75173 837 aa18.16■□□□□ 0.5
VHL-203ENST00000477538 GADD45BO75293 160 aaPredicted RBP18.16■□□□□ 0.5
VHL-203ENST00000477538 CMA1P23946 247 aa18.16■□□□□ 0.5
VHL-203ENST00000477538 MCM4P33991 863 aa18.16■□□□□ 0.5
VHL-203ENST00000477538 CCT6AP40227 531 aaKnown RBP18.16■□□□□ 0.5
VHL-203ENST00000477538 IRX5P78411 483 aaPredicted RBP18.16■□□□□ 0.5
VHL-203ENST00000477538 BEX3Q00994 111 aa18.16■□□□□ 0.5
VHL-203ENST00000477538 CYP4A11Q02928 519 aa18.16■□□□□ 0.5
VHL-203ENST00000477538 FSCN1Q16658 493 aaKnown RBP18.16■□□□□ 0.5
VHL-203ENST00000477538 LHX8Q68G74 356 aa18.16■□□□□ 0.5
VHL-203ENST00000477538 CCDC60Q8IWA6 550 aaPredicted RBP18.16■□□□□ 0.5
VHL-203ENST00000477538 BANK1Q8NDB2 785 aa18.16■□□□□ 0.5
VHL-203ENST00000477538 MRPS27Q92552 414 aaKnown RBP18.16■□□□□ 0.5
VHL-203ENST00000477538 DYDC2Q96IM9 177 aa18.16■□□□□ 0.5
VHL-203ENST00000477538 POLR3CQ9BUI4 534 aaPredicted RBP18.16■□□□□ 0.5
VHL-203ENST00000477538 RNF208Q9H0X6 261 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms