RNA–Protein interactions for RNA: ENST00000477537.1

HLA-DMB-260, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 1,919 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-260ENST00000477537 UBXN2AP68543 259 aa12.2□□□□□ -0.46
HLA-DMB-260ENST00000477537 GLIPR1L2Q4G1C9 344 aa12.2□□□□□ -0.46
HLA-DMB-260ENST00000477537 CIAPIN1Q6FI81 312 aa12.2□□□□□ -0.46
HLA-DMB-260ENST00000477537 ARHGAP27Q6ZUM4 889 aa12.2□□□□□ -0.46
HLA-DMB-260ENST00000477537 KIAA1328Q86T90 577 aa12.2□□□□□ -0.46
HLA-DMB-260ENST00000477537 TEX2Q8IWB9 1127 aa12.2□□□□□ -0.46
HLA-DMB-260ENST00000477537 CCDC170Q8IYT3 715 aa12.2□□□□□ -0.46
HLA-DMB-260ENST00000477537 CEP63Q96MT8 703 aa12.2□□□□□ -0.46
HLA-DMB-260ENST00000477537 EIF2AK1Q9BQI3 630 aaKnown RBP12.2□□□□□ -0.46
HLA-DMB-260ENST00000477537 POLR3CQ9BUI4 534 aaPredicted RBP12.2□□□□□ -0.46
HLA-DMB-260ENST00000477537 WDR18Q9BV38 432 aa12.2□□□□□ -0.46
HLA-DMB-260ENST00000477537 TAOK3Q9H2K8 898 aa12.2□□□□□ -0.46
HLA-DMB-260ENST00000477537 KCTD10Q9H3F6 313 aa12.2□□□□□ -0.46
HLA-DMB-260ENST00000477537 FBXO28Q9NVF7 368 aa12.2□□□□□ -0.46
HLA-DMB-260ENST00000477537 PGAP2Q9UHJ9 254 aa12.2□□□□□ -0.46
HLA-DMB-260ENST00000477537 DDX41Q9UJV9 622 aaKnown RBP12.2□□□□□ -0.46
HLA-DMB-260ENST00000477537 FEM1BQ9UK73 627 aa12.2□□□□□ -0.46
HLA-DMB-260ENST00000477537 ATAD5Q96QE3 1844 aa12.2□□□□□ -0.46
HLA-DMB-260ENST00000477537 WNT10BO00744 389 aa12.19□□□□□ -0.46
HLA-DMB-260ENST00000477537 CDK17Q00537 523 aa12.19□□□□□ -0.46
HLA-DMB-260ENST00000477537 TUBB2AQ13885 445 aa12.19□□□□□ -0.46
HLA-DMB-260ENST00000477537 SLC30A10Q6XR72 485 aa12.19□□□□□ -0.46
HLA-DMB-260ENST00000477537 RSRC2Q7L4I2 434 aaKnown RBP12.19□□□□□ -0.46
HLA-DMB-260ENST00000477537 GOLGA1Q92805 767 aa12.19□□□□□ -0.46
HLA-DMB-260ENST00000477537 REEP2Q9BRK0 252 aa12.19□□□□□ -0.46
HLA-DMB-260ENST00000477537 TUBB2BQ9BVA1 445 aa12.19□□□□□ -0.46
HLA-DMB-260ENST00000477537 HAUS4Q9H6D7 363 aa12.19□□□□□ -0.46
HLA-DMB-260ENST00000477537 EHMT1Q9H9B1 1298 aa12.19□□□□□ -0.46
HLA-DMB-260ENST00000477537 MYOZ2Q9NPC6 264 aa12.19□□□□□ -0.46
HLA-DMB-260ENST00000477537 RGL1Q9NZL6 768 aa12.19□□□□□ -0.46
HLA-DMB-260ENST00000477537 OGFRQ9NZT2 677 aa12.19□□□□□ -0.46
HLA-DMB-260ENST00000477537 TFR2Q9UP52 801 aa12.19□□□□□ -0.46
HLA-DMB-260ENST00000477537 SCAF8Q9UPN6 1271 aaKnown RBP12.19□□□□□ -0.46
HLA-DMB-260ENST00000477537 EIF3CLB5ME19 914 aaKnown RBP12.19□□□□□ -0.46
HLA-DMB-260ENST00000477537 IPO7O95373 1038 aaKnown RBP12.19□□□□□ -0.46
HLA-DMB-260ENST00000477537 GNA14O95837 355 aa12.19□□□□□ -0.46
HLA-DMB-260ENST00000477537 ASNSP08243 561 aa12.19□□□□□ -0.46
HLA-DMB-260ENST00000477537 CLCN6P51797 869 aa12.19□□□□□ -0.46
HLA-DMB-260ENST00000477537 CCDC122Q5T0U0 273 aa12.19□□□□□ -0.46
HLA-DMB-260ENST00000477537 LRCH2Q5VUJ6 765 aa12.19□□□□□ -0.46
HLA-DMB-260ENST00000477537 LDHDQ86WU2 507 aa12.19□□□□□ -0.46
HLA-DMB-260ENST00000477537 SFR1Q86XK3 245 aa12.19□□□□□ -0.46
HLA-DMB-260ENST00000477537 CCDC155Q8N6L0 562 aa12.19□□□□□ -0.46
HLA-DMB-260ENST00000477537 NEK11Q8NG66 645 aa12.19□□□□□ -0.46
HLA-DMB-260ENST00000477537 SMCR8Q8TEV9 937 aaPredicted RBP12.19□□□□□ -0.46
HLA-DMB-260ENST00000477537 JAKMIP2Q96AA8 810 aa12.19□□□□□ -0.46
HLA-DMB-260ENST00000477537 EIF3CQ99613 913 aaKnown RBP12.19□□□□□ -0.46
HLA-DMB-260ENST00000477537 RUSC1Q9BVN2 902 aa12.19□□□□□ -0.46
HLA-DMB-260ENST00000477537 ZNF341Q9BYN7 854 aa12.19□□□□□ -0.46
HLA-DMB-260ENST00000477537 EPC1Q9H2F5 836 aa12.19□□□□□ -0.46
HLA-DMB-260ENST00000477537 BHMT2Q9H2M3 363 aa12.19□□□□□ -0.46
HLA-DMB-260ENST00000477537 ZSWIM4Q9H7M6 989 aa12.19□□□□□ -0.46
HLA-DMB-260ENST00000477537 RABGAP1Q9Y3P9 1069 aa12.19□□□□□ -0.46
HLA-DMB-260ENST00000477537 SBF1O95248 1867 aa12.18□□□□□ -0.46
HLA-DMB-260ENST00000477537 CHMP2AO43633 222 aa12.18□□□□□ -0.46
HLA-DMB-260ENST00000477537 EYA4O95677 639 aa12.18□□□□□ -0.46
HLA-DMB-260ENST00000477537 PLEKP08567 350 aaPredicted RBP12.18□□□□□ -0.46
HLA-DMB-260ENST00000477537 HNRNPH3P31942 346 aaKnown RBP12.18□□□□□ -0.46
HLA-DMB-260ENST00000477537 CASP5P51878 434 aa12.18□□□□□ -0.46
HLA-DMB-260ENST00000477537 MAP3K10Q02779 954 aa12.18□□□□□ -0.46
HLA-DMB-260ENST00000477537 ADAM9Q13443 819 aa12.18□□□□□ -0.46
HLA-DMB-260ENST00000477537 CTTNQ14247 550 aaKnown RBP12.18□□□□□ -0.46
HLA-DMB-260ENST00000477537 RRAGAQ7L523 313 aa12.18□□□□□ -0.46
HLA-DMB-260ENST00000477537 OTOP1Q7RTM1 612 aa12.18□□□□□ -0.46
HLA-DMB-260ENST00000477537 SRGAP1Q7Z6B7 1085 aa12.18□□□□□ -0.46
HLA-DMB-260ENST00000477537 CEP112Q8N8E3 955 aa12.18□□□□□ -0.46
HLA-DMB-260ENST00000477537 SLC5A5Q92911 643 aa12.18□□□□□ -0.46
HLA-DMB-260ENST00000477537 ZFP91Q96JP5 570 aaPredicted RBP12.18□□□□□ -0.46
HLA-DMB-260ENST00000477537 CCDC42Q96M95 316 aa12.18□□□□□ -0.46
HLA-DMB-260ENST00000477537 ARGLU1Q9NWB6 273 aaPredicted RBP12.18□□□□□ -0.46
HLA-DMB-260ENST00000477537 RNF216Q9NWF9 866 aaPredicted RBP12.18□□□□□ -0.46
HLA-DMB-260ENST00000477537 ZNF446Q9NWS9 450 aa12.18□□□□□ -0.46
HLA-DMB-260ENST00000477537 PUF60Q9UHX1 559 aaKnown RBP12.18□□□□□ -0.46
HLA-DMB-260ENST00000477537 RCCD1A6NED2 376 aa12.17□□□□□ -0.46
HLA-DMB-260ENST00000477537 RSPH10B2B2RC85 870 aa12.17□□□□□ -0.46
HLA-DMB-260ENST00000477537 TBCAO75347 108 aaKnown RBP12.17□□□□□ -0.46
HLA-DMB-260ENST00000477537 PSMD10O75832 226 aa12.17□□□□□ -0.46
HLA-DMB-260ENST00000477537 RSPH10BP0C881 870 aa12.17□□□□□ -0.46
HLA-DMB-260ENST00000477537 INPP5BP32019 993 aa12.17□□□□□ -0.46
HLA-DMB-260ENST00000477537 CHMP4BP1P59074 171 aa12.17□□□□□ -0.46
HLA-DMB-260ENST00000477537 CYP27A1Q02318 531 aa12.17□□□□□ -0.46
HLA-DMB-260ENST00000477537 KCNMA1Q12791 1236 aa12.17□□□□□ -0.46
HLA-DMB-260ENST00000477537 RASA3Q14644 834 aa12.17□□□□□ -0.46
HLA-DMB-260ENST00000477537 GPR162Q16538 588 aa12.17□□□□□ -0.46
HLA-DMB-260ENST00000477537 ZNF662Q6ZS27 426 aa12.17□□□□□ -0.46
HLA-DMB-260ENST00000477537 TPH2Q8IWU9 490 aa12.17□□□□□ -0.46
HLA-DMB-260ENST00000477537 ZC3H3Q8IXZ2 948 aaKnown RBP12.17□□□□□ -0.46
HLA-DMB-260ENST00000477537 GPR161Q8N6U8 529 aaKnown RBP12.17□□□□□ -0.46
HLA-DMB-260ENST00000477537 JDP2Q8WYK2 163 aa12.17□□□□□ -0.46
HLA-DMB-260ENST00000477537 RABGGTAQ92696 567 aa12.17□□□□□ -0.46
HLA-DMB-260ENST00000477537 DYDC2Q96IM9 177 aa12.17□□□□□ -0.46
HLA-DMB-260ENST00000477537 PLAGL2Q9UPG8 496 aa12.17□□□□□ -0.46
HLA-DMB-260ENST00000477537 LRRC53A6NM62 1247 aa12.17□□□□□ -0.46
HLA-DMB-260ENST00000477537 CETN3O15182 167 aa12.17□□□□□ -0.46
HLA-DMB-260ENST00000477537 KRT86O43790 486 aa12.17□□□□□ -0.46
HLA-DMB-260ENST00000477537 GAS7O60861 476 aa12.17□□□□□ -0.46
HLA-DMB-260ENST00000477537 PRPF6O94906 941 aaKnown RBP12.17□□□□□ -0.46
HLA-DMB-260ENST00000477537 MYBP10242 640 aa12.17□□□□□ -0.46
HLA-DMB-260ENST00000477537 EIF4A3P38919 411 aaKnown RBP12.17□□□□□ -0.46
HLA-DMB-260ENST00000477537 MARSP56192 900 aaKnown RBP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms