RNA–Protein interactions for RNA: ENST00000477508.1

TOP3A-205, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 600 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-205ENST00000477508 ACTR2P61160 394 aa14.84□□□□□ -0.03
TOP3A-205ENST00000477508 SP4Q02446 784 aa14.84□□□□□ -0.03
TOP3A-205ENST00000477508 LRRC26Q2I0M4 334 aa14.84□□□□□ -0.03
TOP3A-205ENST00000477508 NFRKBQ6P4R8 1299 aa14.84□□□□□ -0.03
TOP3A-205ENST00000477508 ANKRD33Q7Z3H0 272 aa14.84□□□□□ -0.03
TOP3A-205ENST00000477508 BRAPQ7Z569 592 aa14.84□□□□□ -0.03
TOP3A-205ENST00000477508 RDM1Q8NG50 284 aa14.84□□□□□ -0.03
TOP3A-205ENST00000477508 ETNPPLQ8TBG4 499 aa14.84□□□□□ -0.03
TOP3A-205ENST00000477508 TNPO1Q92973 898 aaKnown RBP14.84□□□□□ -0.03
TOP3A-205ENST00000477508 TOX2Q96NM4 488 aa14.84□□□□□ -0.03
TOP3A-205ENST00000477508 TEKT3Q9BXF9 490 aa14.84□□□□□ -0.03
TOP3A-205ENST00000477508 SMARCAD1Q9H4L7 1026 aa14.84□□□□□ -0.03
TOP3A-205ENST00000477508 KCNMB3Q9NPA1 279 aa14.84□□□□□ -0.03
TOP3A-205ENST00000477508 SCN10AQ9Y5Y9 1956 aa14.84□□□□□ -0.03
TOP3A-205ENST00000477508 DOCK5Q9H7D0 1870 aa14.83□□□□□ -0.04
TOP3A-205ENST00000477508 GSTTP1A0A1W2PQM5 241 aa14.83□□□□□ -0.04
TOP3A-205ENST00000477508 DCDC2CA8MYV0 355 aa14.83□□□□□ -0.04
TOP3A-205ENST00000477508 WDR64B1ANS9 1081 aa14.83□□□□□ -0.04
TOP3A-205ENST00000477508 H3BRB1 525 aa14.83□□□□□ -0.04
TOP3A-205ENST00000477508 TLR3O15455 904 aaKnown RBP14.83□□□□□ -0.04
TOP3A-205ENST00000477508 SLC37A4O43826 429 aa14.83□□□□□ -0.04
TOP3A-205ENST00000477508 NEMFO60524 1076 aa14.83□□□□□ -0.04
TOP3A-205ENST00000477508 LGALS2P05162 132 aa14.83□□□□□ -0.04
TOP3A-205ENST00000477508 SYT1P21579 422 aa14.83□□□□□ -0.04
TOP3A-205ENST00000477508 SFNP31947 248 aa14.83□□□□□ -0.04
TOP3A-205ENST00000477508 PSEN2P49810 448 aa14.83□□□□□ -0.04
TOP3A-205ENST00000477508 SLC26A2P50443 739 aa14.83□□□□□ -0.04
TOP3A-205ENST00000477508 RTP1P59025 263 aa14.83□□□□□ -0.04
TOP3A-205ENST00000477508 RILPL1Q5EBL4 403 aa14.83□□□□□ -0.04
TOP3A-205ENST00000477508 MIS18BP1Q6P0N0 1132 aa14.83□□□□□ -0.04
TOP3A-205ENST00000477508 SESTD1Q86VW0 696 aa14.83□□□□□ -0.04
TOP3A-205ENST00000477508 C16orf70Q9BSU1 422 aa14.83□□□□□ -0.04
TOP3A-205ENST00000477508 TUT1Q9H6E5 874 aaKnown RBP14.83□□□□□ -0.04
TOP3A-205ENST00000477508 AZI2Q9H6S1 392 aa14.83□□□□□ -0.04
TOP3A-205ENST00000477508 DNAH12Q6ZR08 3092 aa14.83□□□□□ -0.04
TOP3A-205ENST00000477508 PDE4DIPQ5VU43 2346 aa14.82□□□□□ -0.04
TOP3A-205ENST00000477508 VPS37CA5D8V6 355 aaPredicted RBP14.82□□□□□ -0.04
TOP3A-205ENST00000477508 KIF28PB7ZC32 967 aa14.82□□□□□ -0.04
TOP3A-205ENST00000477508 HAS3O00219 553 aa14.82□□□□□ -0.04
TOP3A-205ENST00000477508 LGR5O75473 907 aa14.82□□□□□ -0.04
TOP3A-205ENST00000477508 PSMD10O75832 226 aa14.82□□□□□ -0.04
TOP3A-205ENST00000477508 SUPT20HL2P0C7V6 817 aa14.82□□□□□ -0.04
TOP3A-205ENST00000477508 ZNF286BP0CG31 522 aa14.82□□□□□ -0.04
TOP3A-205ENST00000477508 VASPP50552 380 aaPredicted RBP14.82□□□□□ -0.04
TOP3A-205ENST00000477508 JAK3P52333 1124 aa14.82□□□□□ -0.04
TOP3A-205ENST00000477508 MFSD10Q14728 455 aa14.82□□□□□ -0.04
TOP3A-205ENST00000477508 CALCRLQ16602 461 aa14.82□□□□□ -0.04
TOP3A-205ENST00000477508 NBPF20Q3BBV1 942 aa14.82□□□□□ -0.04
TOP3A-205ENST00000477508 TTC38Q5R3I4 469 aa14.82□□□□□ -0.04
TOP3A-205ENST00000477508 FAM160B1Q5W0V3 765 aa14.82□□□□□ -0.04
TOP3A-205ENST00000477508 ABHD15Q6UXT9 468 aa14.82□□□□□ -0.04
TOP3A-205ENST00000477508 PLPPR4Q7Z2D5 763 aa14.82□□□□□ -0.04
TOP3A-205ENST00000477508 KAT2BQ92831 832 aa14.82□□□□□ -0.04
TOP3A-205ENST00000477508 GLG1Q92896 1179 aa14.82□□□□□ -0.04
TOP3A-205ENST00000477508 ERAP1Q9NZ08 941 aa14.82□□□□□ -0.04
TOP3A-205ENST00000477508 ATP11BQ9Y2G3 1177 aa14.82□□□□□ -0.04
TOP3A-205ENST00000477508 PCDHA10Q9Y5I2 948 aa14.82□□□□□ -0.04
TOP3A-205ENST00000477508 GRIN2DO15399 1336 aa14.82□□□□□ -0.04
TOP3A-205ENST00000477508 EMSYQ7Z589 1322 aa14.82□□□□□ -0.04
TOP3A-205ENST00000477508 IGKV6D-21A0A0A0MT36 114 aa14.81□□□□□ -0.04
TOP3A-205ENST00000477508 DDX39AO00148 427 aaKnown RBP14.81□□□□□ -0.04
TOP3A-205ENST00000477508 STX6O43752 255 aa14.81□□□□□ -0.04
TOP3A-205ENST00000477508 CCNE2O96020 404 aa14.81□□□□□ -0.04
TOP3A-205ENST00000477508 PSAPP07602 524 aa14.81□□□□□ -0.04
TOP3A-205ENST00000477508 ATP2B1P20020 1258 aa14.81□□□□□ -0.04
TOP3A-205ENST00000477508 MCM7P33993 719 aa14.81□□□□□ -0.04
TOP3A-205ENST00000477508 PSMC6P62333 389 aa14.81□□□□□ -0.04
TOP3A-205ENST00000477508 TLE2Q04725 743 aa14.81□□□□□ -0.04
TOP3A-205ENST00000477508 PPP2R5CQ13362 524 aa14.81□□□□□ -0.04
TOP3A-205ENST00000477508 KIAA0753Q2KHM9 967 aa14.81□□□□□ -0.04
TOP3A-205ENST00000477508 TRIM60Q495X7 471 aa14.81□□□□□ -0.04
TOP3A-205ENST00000477508 UTP14CQ5TAP6 766 aaKnown RBP14.81□□□□□ -0.04
TOP3A-205ENST00000477508 C7orf31Q8N865 590 aa14.81□□□□□ -0.04
TOP3A-205ENST00000477508 ZSCAN16Q9H4T2 348 aaPredicted RBP14.81□□□□□ -0.04
TOP3A-205ENST00000477508 PCDHA12Q9UN75 941 aa14.81□□□□□ -0.04
TOP3A-205ENST00000477508 SAMM50Q9Y512 469 aa14.81□□□□□ -0.04
TOP3A-205ENST00000477508 LAD1O00515 517 aa14.8□□□□□ -0.04
TOP3A-205ENST00000477508 BACH1O14867 736 aa14.8□□□□□ -0.04
TOP3A-205ENST00000477508 PQBP1O60828 265 aaKnown RBP14.8□□□□□ -0.04
TOP3A-205ENST00000477508 GNAT1P11488 350 aa14.8□□□□□ -0.04
TOP3A-205ENST00000477508 STAT5BP51692 787 aa14.8□□□□□ -0.04
TOP3A-205ENST00000477508 FAM47CQ5HY64 1035 aa14.8□□□□□ -0.04
TOP3A-205ENST00000477508 B3GNT9Q6UX72 402 aa14.8□□□□□ -0.04
TOP3A-205ENST00000477508 FAM126BQ8IXS8 530 aa14.8□□□□□ -0.04
TOP3A-205ENST00000477508 AFAP1L1Q8TED9 768 aa14.8□□□□□ -0.04
TOP3A-205ENST00000477508 HAS1Q92839 578 aa14.8□□□□□ -0.04
TOP3A-205ENST00000477508 MTMR9Q96QG7 549 aa14.8□□□□□ -0.04
TOP3A-205ENST00000477508 DISC1Q9NRI5 854 aa14.8□□□□□ -0.04
TOP3A-205ENST00000477508 PRKAG2Q9UGJ0 569 aa14.8□□□□□ -0.04
TOP3A-205ENST00000477508 DKC1O60832 514 aaKnown RBP eCLIP14.79□□□□□ -0.04
TOP3A-205ENST00000477508 BMP15O95972 392 aa14.79□□□□□ -0.04
TOP3A-205ENST00000477508 CLTBP09497 229 aa14.79□□□□□ -0.04
TOP3A-205ENST00000477508 TOB1P50616 345 aaPredicted RBP14.79□□□□□ -0.04
TOP3A-205ENST00000477508 CHMP4BP1P59074 171 aa14.79□□□□□ -0.04
TOP3A-205ENST00000477508 ZNF174Q15697 407 aa14.79□□□□□ -0.04
TOP3A-205ENST00000477508 PDXDC2PQ6P474 469 aa14.79□□□□□ -0.04
TOP3A-205ENST00000477508 MIER3Q7Z3K6 550 aa14.79□□□□□ -0.04
TOP3A-205ENST00000477508 C7orf61Q8IZ16 206 aa14.79□□□□□ -0.04
TOP3A-205ENST00000477508 UIMC1Q96RL1 719 aa14.79□□□□□ -0.04
TOP3A-205ENST00000477508 UNC45AQ9H3U1 944 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms