RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 SMARCC2Q8TAQ2 1214 aa7.72□□□□□ -1.17
RTFDC1-206ENST00000477485 LMBR1Q8WVP7 490 aa7.72□□□□□ -1.17
RTFDC1-206ENST00000477485 ANKS1AQ92625 1134 aa7.72□□□□□ -1.17
RTFDC1-206ENST00000477485 CUL5Q93034 780 aa7.72□□□□□ -1.17
RTFDC1-206ENST00000477485 MFSD14AQ96MC6 490 aa7.72□□□□□ -1.17
RTFDC1-206ENST00000477485 USP26Q9BXU7 913 aa7.72□□□□□ -1.17
RTFDC1-206ENST00000477485 ALG13Q9NP73 1137 aaKnown RBP7.72□□□□□ -1.17
RTFDC1-206ENST00000477485 MAP3K20Q9NYL2 800 aaKnown RBP7.72□□□□□ -1.17
RTFDC1-206ENST00000477485 PKD2L1Q9P0L9 805 aa7.72□□□□□ -1.17
RTFDC1-206ENST00000477485 MAD2L2Q9UI95 211 aa7.72□□□□□ -1.17
RTFDC1-206ENST00000477485 RWDD3Q9Y3V2 267 aa7.72□□□□□ -1.17
RTFDC1-206ENST00000477485 TTC3P53804 2025 aa7.71□□□□□ -1.17
RTFDC1-206ENST00000477485 EVPLQ92817 2033 aa7.71□□□□□ -1.17
RTFDC1-206ENST00000477485 ZNF318Q5VUA4 2279 aa7.71□□□□□ -1.17
RTFDC1-206ENST00000477485 FNDC1Q4ZHG4 1894 aaPredicted RBP7.71□□□□□ -1.18
RTFDC1-206ENST00000477485 HIP1O00291 1037 aa7.71□□□□□ -1.18
RTFDC1-206ENST00000477485 IFIT3O14879 490 aaKnown RBP7.71□□□□□ -1.18
RTFDC1-206ENST00000477485 LINC01565O15544 149 aa7.71□□□□□ -1.18
RTFDC1-206ENST00000477485 FIBPO43427 364 aa7.71□□□□□ -1.18
RTFDC1-206ENST00000477485 MBTPS2O43462 519 aa7.71□□□□□ -1.18
RTFDC1-206ENST00000477485 NCK2O43639 380 aa7.71□□□□□ -1.18
RTFDC1-206ENST00000477485 CAND2O75155 1236 aa7.71□□□□□ -1.18
RTFDC1-206ENST00000477485 BMPR1AP36894 532 aa7.71□□□□□ -1.18
RTFDC1-206ENST00000477485 NT5C2P49902 561 aa7.71□□□□□ -1.18
RTFDC1-206ENST00000477485 DLX2Q07687 328 aaPredicted RBP7.71□□□□□ -1.18
RTFDC1-206ENST00000477485 HYAL1Q12794 435 aa7.71□□□□□ -1.18
RTFDC1-206ENST00000477485 PPFIA1Q13136 1202 aa7.71□□□□□ -1.18
RTFDC1-206ENST00000477485 SPOUT1Q5T280 376 aaKnown RBP7.71□□□□□ -1.18
RTFDC1-206ENST00000477485 METTL7BQ6UX53 244 aa7.71□□□□□ -1.18
RTFDC1-206ENST00000477485 CYB5R4Q7L1T6 521 aa7.71□□□□□ -1.18
RTFDC1-206ENST00000477485 RSPH3Q86UC2 560 aa7.71□□□□□ -1.18
RTFDC1-206ENST00000477485 PPP2R3CQ969Q6 453 aa7.71□□□□□ -1.18
RTFDC1-206ENST00000477485 GPR20Q99678 358 aa7.71□□□□□ -1.18
RTFDC1-206ENST00000477485 LMAN2LQ9H0V9 348 aa7.71□□□□□ -1.18
RTFDC1-206ENST00000477485 RTN4Q9NQC3 1192 aaKnown RBP7.71□□□□□ -1.18
RTFDC1-206ENST00000477485 CD207Q9UJ71 328 aa7.71□□□□□ -1.18
RTFDC1-206ENST00000477485 C5orf42Q9H799 3197 aa7.71□□□□□ -1.18
RTFDC1-206ENST00000477485 MYH9P35579 1960 aaKnown RBP7.7□□□□□ -1.18
RTFDC1-206ENST00000477485 PIEZO1Q92508 2521 aa7.7□□□□□ -1.18
RTFDC1-206ENST00000477485 PPFIA3O75145 1194 aa7.7□□□□□ -1.18
RTFDC1-206ENST00000477485 TBX10O75333 385 aa7.7□□□□□ -1.18
RTFDC1-206ENST00000477485 STAM2O75886 525 aa7.7□□□□□ -1.18
RTFDC1-206ENST00000477485 CHRNA1P02708 482 aa7.7□□□□□ -1.18
RTFDC1-206ENST00000477485 RB1P06400 928 aa7.7□□□□□ -1.18
RTFDC1-206ENST00000477485 TCF7P36402 384 aaPredicted RBP7.7□□□□□ -1.18
RTFDC1-206ENST00000477485 LTBRP36941 435 aa7.7□□□□□ -1.18
RTFDC1-206ENST00000477485 MRPS9P82933 396 aaKnown RBP7.7□□□□□ -1.18
RTFDC1-206ENST00000477485 TMEM62Q0P6H9 643 aa7.7□□□□□ -1.18
RTFDC1-206ENST00000477485 SMAD4Q13485 552 aaKnown RBP7.7□□□□□ -1.18
RTFDC1-206ENST00000477485 HDAC1Q13547 482 aaPredicted RBP7.7□□□□□ -1.18
RTFDC1-206ENST00000477485 GRM4Q14833 912 aa7.7□□□□□ -1.18
RTFDC1-206ENST00000477485 WTAPQ15007 396 aa7.7□□□□□ -1.18
RTFDC1-206ENST00000477485 SMAD2Q15796 467 aaKnown RBP7.7□□□□□ -1.18
RTFDC1-206ENST00000477485 RUFY4Q6ZNE9 571 aa7.7□□□□□ -1.18
RTFDC1-206ENST00000477485 RALYLQ86SE5 291 aaKnown RBP7.7□□□□□ -1.18
RTFDC1-206ENST00000477485 RBM23Q86U06 439 aaKnown RBP7.7□□□□□ -1.18
RTFDC1-206ENST00000477485 NLRX1Q86UT6 975 aa7.7□□□□□ -1.18
RTFDC1-206ENST00000477485 TICAM2Q86XR7 235 aa7.7□□□□□ -1.18
RTFDC1-206ENST00000477485 RNF135Q8IUD6 432 aa7.7□□□□□ -1.18
RTFDC1-206ENST00000477485 SUGP1Q8IWZ8 645 aaKnown RBP7.7□□□□□ -1.18
RTFDC1-206ENST00000477485 SAMD3Q8N6K7 520 aa7.7□□□□□ -1.18
RTFDC1-206ENST00000477485 DNAJB3Q8WWF6 145 aa7.7□□□□□ -1.18
RTFDC1-206ENST00000477485 GLG1Q92896 1179 aa7.7□□□□□ -1.18
RTFDC1-206ENST00000477485 DSCC1Q9BVC3 393 aa7.7□□□□□ -1.18
RTFDC1-206ENST00000477485 FAM49AQ9H0Q0 323 aaPredicted RBP7.7□□□□□ -1.18
RTFDC1-206ENST00000477485 SEC63Q9UGP8 760 aaKnown RBP7.7□□□□□ -1.18
RTFDC1-206ENST00000477485 TUBE1Q9UJT0 475 aa7.7□□□□□ -1.18
RTFDC1-206ENST00000477485 LRFN2Q9ULH4 789 aa7.7□□□□□ -1.18
RTFDC1-206ENST00000477485 TELO2Q9Y4R8 837 aa7.7□□□□□ -1.18
RTFDC1-206ENST00000477485 CDY2AQ9Y6F7 541 aa7.7□□□□□ -1.18
RTFDC1-206ENST00000477485 NRCAMQ92823 1304 aa7.7□□□□□ -1.18
RTFDC1-206ENST00000477485 PNMA6FA0A0J9YX94 578 aa7.69□□□□□ -1.18
RTFDC1-206ENST00000477485 POTEB3A0JP26 581 aa7.69□□□□□ -1.18
RTFDC1-206ENST00000477485 PALM3A6NDB9 673 aaPredicted RBP7.69□□□□□ -1.18
RTFDC1-206ENST00000477485 C19orf67A6NJJ6 358 aa7.69□□□□□ -1.18
RTFDC1-206ENST00000477485 SPATA31C2B4DYI2 1134 aa7.69□□□□□ -1.18
RTFDC1-206ENST00000477485 M0QZ92 97 aa7.69□□□□□ -1.18
RTFDC1-206ENST00000477485 MMP1P03956 469 aa7.69□□□□□ -1.18
RTFDC1-206ENST00000477485 HOXC8P31273 242 aa7.69□□□□□ -1.18
RTFDC1-206ENST00000477485 CD52P31358 61 aa7.69□□□□□ -1.18
RTFDC1-206ENST00000477485 NRIP1P48552 1158 aa7.69□□□□□ -1.18
RTFDC1-206ENST00000477485 GHRHRQ02643 423 aa7.69□□□□□ -1.18
RTFDC1-206ENST00000477485 LPIN1Q14693 890 aa7.69□□□□□ -1.18
RTFDC1-206ENST00000477485 SART3Q15020 963 aaKnown RBP7.69□□□□□ -1.18
RTFDC1-206ENST00000477485 SEC23AQ15436 765 aa7.69□□□□□ -1.18
RTFDC1-206ENST00000477485 GRIK4Q16099 956 aa7.69□□□□□ -1.18
RTFDC1-206ENST00000477485 FAM26DQ5JW98 314 aa7.69□□□□□ -1.18
RTFDC1-206ENST00000477485 TAF2Q6P1X5 1199 aa7.69□□□□□ -1.18
RTFDC1-206ENST00000477485 USP17L6PQ6QN14 398 aa7.69□□□□□ -1.18
RTFDC1-206ENST00000477485 POTEBQ6S5H4 581 aa7.69□□□□□ -1.18
RTFDC1-206ENST00000477485 TSHZ1Q6ZSZ6 1077 aa7.69□□□□□ -1.18
RTFDC1-206ENST00000477485 CATIPQ7Z7H3 387 aa7.69□□□□□ -1.18
RTFDC1-206ENST00000477485 ZBTB33Q86T24 672 aa7.69□□□□□ -1.18
RTFDC1-206ENST00000477485 CHD1LQ86WJ1 897 aa7.69□□□□□ -1.18
RTFDC1-206ENST00000477485 PLEKHM2Q8IWE5 1019 aa7.69□□□□□ -1.18
RTFDC1-206ENST00000477485 GIMAP8Q8ND71 665 aaPredicted RBP7.69□□□□□ -1.18
RTFDC1-206ENST00000477485 MICAL1Q8TDZ2 1067 aa7.69□□□□□ -1.18
RTFDC1-206ENST00000477485 PBXIP1Q96AQ6 731 aa7.69□□□□□ -1.18
RTFDC1-206ENST00000477485 MTMR8Q96EF0 704 aa7.69□□□□□ -1.18
RTFDC1-206ENST00000477485 KCNH6Q9H252 994 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms