RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 MAP3K9P80192 1104 aa12.06□□□□□ -0.48
COL27A1-204ENST00000477421 MESDQ14696 234 aa12.06□□□□□ -0.48
COL27A1-204ENST00000477421 WDR44Q5JSH3 913 aa12.06□□□□□ -0.48
COL27A1-204ENST00000477421 RCSD1Q6JBY9 416 aa12.06□□□□□ -0.48
COL27A1-204ENST00000477421 GUF1Q8N442 669 aaKnown RBP12.06□□□□□ -0.48
COL27A1-204ENST00000477421 ZNF713Q8N859 430 aaPredicted RBP12.06□□□□□ -0.48
COL27A1-204ENST00000477421 PAGR1Q9BTK6 254 aa12.06□□□□□ -0.48
COL27A1-204ENST00000477421 KCNK9Q9NPC2 374 aa12.06□□□□□ -0.48
COL27A1-204ENST00000477421 PVALEFA0A1B0GWK0 134 aa12.06□□□□□ -0.48
COL27A1-204ENST00000477421 PALM3A6NDB9 673 aaPredicted RBP12.06□□□□□ -0.48
COL27A1-204ENST00000477421 EEPD1Q7L9B9 569 aa12.06□□□□□ -0.48
COL27A1-204ENST00000477421 HOOK3Q86VS8 718 aa12.06□□□□□ -0.48
COL27A1-204ENST00000477421 OTUD6BQ8N6M0 293 aa12.06□□□□□ -0.48
COL27A1-204ENST00000477421 GIMAP8Q8ND71 665 aaPredicted RBP12.06□□□□□ -0.48
COL27A1-204ENST00000477421 HOOK2Q96ED9 719 aa12.06□□□□□ -0.48
COL27A1-204ENST00000477421 PARVGQ9HBI0 331 aa12.06□□□□□ -0.48
COL27A1-204ENST00000477421 ASIC3Q9UHC3 531 aa12.06□□□□□ -0.48
COL27A1-204ENST00000477421 ADAM21Q9UKJ8 722 aa12.06□□□□□ -0.48
COL27A1-204ENST00000477421 ATF5Q9Y2D1 282 aaPredicted RBP12.06□□□□□ -0.48
COL27A1-204ENST00000477421 PALMO75781 387 aa12.05□□□□□ -0.48
COL27A1-204ENST00000477421 NDUFB10O96000 172 aa12.05□□□□□ -0.48
COL27A1-204ENST00000477421 KCNB1Q14721 858 aa12.05□□□□□ -0.48
COL27A1-204ENST00000477421 MMS19Q96T76 1030 aa12.05□□□□□ -0.48
COL27A1-204ENST00000477421 RTFDC1Q9BY42 306 aaPredicted RBP12.05□□□□□ -0.48
COL27A1-204ENST00000477421 MTUS1Q9ULD2 1270 aa12.05□□□□□ -0.48
COL27A1-204ENST00000477421 ACTN1P12814 892 aa12.05□□□□□ -0.48
COL27A1-204ENST00000477421 CTNNA1P35221 906 aaKnown RBP12.05□□□□□ -0.48
COL27A1-204ENST00000477421 GNGT1P63211 74 aa12.05□□□□□ -0.48
COL27A1-204ENST00000477421 CAPN11Q9UMQ6 739 aa12.05□□□□□ -0.48
COL27A1-204ENST00000477421 TRIM49P0CI25 452 aa12.05□□□□□ -0.48
COL27A1-204ENST00000477421 TRIM49CP0CI26 452 aa12.05□□□□□ -0.48
COL27A1-204ENST00000477421 ZNF18P17022 549 aa12.05□□□□□ -0.48
COL27A1-204ENST00000477421 GBP2P32456 591 aaPredicted RBP12.05□□□□□ -0.48
COL27A1-204ENST00000477421 PSMC2P35998 433 aaKnown RBP12.05□□□□□ -0.48
COL27A1-204ENST00000477421 PROCA1Q8NCQ7 364 aaPredicted RBP12.05□□□□□ -0.48
COL27A1-204ENST00000477421 BCAS4Q8TDM0 211 aa12.05□□□□□ -0.48
COL27A1-204ENST00000477421 IQCDQ96DY2 449 aa12.05□□□□□ -0.48
COL27A1-204ENST00000477421 DYDC2Q96IM9 177 aa12.05□□□□□ -0.48
COL27A1-204ENST00000477421 GOLPH3Q9H4A6 298 aa12.05□□□□□ -0.48
COL27A1-204ENST00000477421 ZNF408Q9H9D4 720 aa12.05□□□□□ -0.48
COL27A1-204ENST00000477421 A0A1W2PRG0 241 aa12.04□□□□□ -0.48
COL27A1-204ENST00000477421 HNRNPDLO14979 420 aaKnown RBP12.04□□□□□ -0.48
COL27A1-204ENST00000477421 MNAT1P51948 309 aa12.04□□□□□ -0.48
COL27A1-204ENST00000477421 PPP4CP60510 307 aa12.04□□□□□ -0.48
COL27A1-204ENST00000477421 PPFIA1Q13136 1202 aa12.04□□□□□ -0.48
COL27A1-204ENST00000477421 PSMD2Q13200 908 aa12.04□□□□□ -0.48
COL27A1-204ENST00000477421 PDXDC2PQ6P474 469 aa12.04□□□□□ -0.48
COL27A1-204ENST00000477421 POMGNT1Q8WZA1 660 aa12.04□□□□□ -0.48
COL27A1-204ENST00000477421 INTS13Q9NVM9 706 aa12.04□□□□□ -0.48
COL27A1-204ENST00000477421 TSKSQ9UJT2 592 aa12.04□□□□□ -0.48
COL27A1-204ENST00000477421 NFU1Q9UMS0 254 aa12.04□□□□□ -0.48
COL27A1-204ENST00000477421 NMT1P30419 496 aaKnown RBP12.04□□□□□ -0.48
COL27A1-204ENST00000477421 HSPA1LP34931 641 aa12.04□□□□□ -0.48
COL27A1-204ENST00000477421 STRN3Q13033 797 aa12.04□□□□□ -0.48
COL27A1-204ENST00000477421 MICALCLQ6ZW33 695 aa12.04□□□□□ -0.48
COL27A1-204ENST00000477421 TAB3Q8N5C8 712 aaPredicted RBP12.04□□□□□ -0.48
COL27A1-204ENST00000477421 RIN2Q8WYP3 895 aaPredicted RBP12.04□□□□□ -0.48
COL27A1-204ENST00000477421 TMOD4Q9NZQ9 345 aa12.04□□□□□ -0.48
COL27A1-204ENST00000477421 MTRF1LQ9UGC7 380 aaKnown RBP12.04□□□□□ -0.48
COL27A1-204ENST00000477421 SERPING1P05155 500 aa12.04□□□□□ -0.48
COL27A1-204ENST00000477421 CD19P15391 556 aa12.04□□□□□ -0.48
COL27A1-204ENST00000477421 MYL7Q01449 175 aa12.04□□□□□ -0.48
COL27A1-204ENST00000477421 GLG1Q92896 1179 aa12.04□□□□□ -0.48
COL27A1-204ENST00000477421 NACC1Q96RE7 527 aa12.04□□□□□ -0.48
COL27A1-204ENST00000477421 UBE2TQ9NPD8 197 aaPredicted RBP12.04□□□□□ -0.48
COL27A1-204ENST00000477421 KCNQ5Q9NR82 932 aa12.04□□□□□ -0.48
COL27A1-204ENST00000477421 ANKFY1Q9P2R3 1169 aa12.04□□□□□ -0.48
COL27A1-204ENST00000477421 FAM184BQ9ULE4 1060 aa12.04□□□□□ -0.48
COL27A1-204ENST00000477421 PTPN22Q9Y2R2 807 aa12.04□□□□□ -0.48
COL27A1-204ENST00000477421 LTN1O94822 1766 aa12.04□□□□□ -0.48
COL27A1-204ENST00000477421 LRRIQ4A6NIV6 560 aa12.03□□□□□ -0.48
COL27A1-204ENST00000477421 NR3C1P04150 777 aa12.03□□□□□ -0.48
COL27A1-204ENST00000477421 SRGNP10124 158 aa12.03□□□□□ -0.48
COL27A1-204ENST00000477421 UBL4BQ8N7F7 174 aa12.03□□□□□ -0.48
COL27A1-204ENST00000477421 LACRTQ9GZZ8 138 aa12.03□□□□□ -0.48
COL27A1-204ENST00000477421 RAVER2Q9HCJ3 691 aaKnown RBP12.03□□□□□ -0.48
COL27A1-204ENST00000477421 EHD2Q9NZN4 543 aa12.03□□□□□ -0.48
COL27A1-204ENST00000477421 MORC2Q9Y6X9 1032 aaPredicted RBP12.03□□□□□ -0.48
COL27A1-204ENST00000477421 ABCB11O95342 1321 aa12.03□□□□□ -0.48
COL27A1-204ENST00000477421 KCNJ6P48051 423 aa12.03□□□□□ -0.48
COL27A1-204ENST00000477421 SARSP49591 514 aaKnown RBP12.03□□□□□ -0.48
COL27A1-204ENST00000477421 PEX3P56589 373 aa12.03□□□□□ -0.48
COL27A1-204ENST00000477421 ARFGAP2Q8N6H7 521 aa12.03□□□□□ -0.48
COL27A1-204ENST00000477421 MS4A14Q96JA4 679 aa12.03□□□□□ -0.48
COL27A1-204ENST00000477421 JCADQ9P266 1359 aa12.03□□□□□ -0.48
COL27A1-204ENST00000477421 VIMP08670 466 aaKnown RBP12.03□□□□□ -0.48
COL27A1-204ENST00000477421 KRT19P08727 400 aa12.03□□□□□ -0.48
COL27A1-204ENST00000477421 ZNF746Q6NUN9 644 aaPredicted RBP12.03□□□□□ -0.48
COL27A1-204ENST00000477421 KIFAP3Q92845 792 aa12.03□□□□□ -0.48
COL27A1-204ENST00000477421 NUDT12Q9BQG2 462 aa12.03□□□□□ -0.48
COL27A1-204ENST00000477421 L2HGDHQ9H9P8 463 aa12.03□□□□□ -0.48
COL27A1-204ENST00000477421 A0A1W2PQC6 194 aa12.03□□□□□ -0.48
COL27A1-204ENST00000477421 GCLMP48507 274 aa12.03□□□□□ -0.48
COL27A1-204ENST00000477421 HNRNPH2P55795 449 aaKnown RBP12.03□□□□□ -0.48
COL27A1-204ENST00000477421 MDM2Q00987 491 aaPredicted RBP12.03□□□□□ -0.48
COL27A1-204ENST00000477421 DNAAF5Q86Y56 855 aa12.03□□□□□ -0.48
COL27A1-204ENST00000477421 SYCE1Q8N0S2 351 aa12.03□□□□□ -0.48
COL27A1-204ENST00000477421 LRRC45Q96CN5 670 aa12.03□□□□□ -0.48
COL27A1-204ENST00000477421 EXOC7Q9UPT5 735 aa12.03□□□□□ -0.48
COL27A1-204ENST00000477421 CLEC11AQ9Y240 323 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms