RNA–Protein interactions for RNA: ENST00000477169.5

SMARCD3-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 5

Gene SMARCD3, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-210ENST00000477169 VPS54Q9P1Q0 977 aa19.67■□□□□ 0.74
SMARCD3-210ENST00000477169 YBX2Q9Y2T7 364 aaKnown RBP19.67■□□□□ 0.74
SMARCD3-210ENST00000477169 SMCO2A6NFE2 343 aa19.66■□□□□ 0.74
SMARCD3-210ENST00000477169 H3BRB1 525 aa19.66■□□□□ 0.74
SMARCD3-210ENST00000477169 NOP56O00567 594 aaKnown RBP19.66■□□□□ 0.74
SMARCD3-210ENST00000477169 BAIAP3O94812 1187 aa19.66■□□□□ 0.74
SMARCD3-210ENST00000477169 CKBP12277 381 aa19.66■□□□□ 0.74
SMARCD3-210ENST00000477169 RABGGTBP53611 331 aa19.66■□□□□ 0.74
SMARCD3-210ENST00000477169 GPNMBQ14956 572 aa19.66■□□□□ 0.74
SMARCD3-210ENST00000477169 LRRC8DQ7L1W4 858 aa19.66■□□□□ 0.74
SMARCD3-210ENST00000477169 CYFIP1Q7L576 1253 aa19.66■□□□□ 0.74
SMARCD3-210ENST00000477169 SNX21Q969T3 373 aa19.66■□□□□ 0.74
SMARCD3-210ENST00000477169 SLC9A7Q96T83 725 aa19.66■□□□□ 0.74
SMARCD3-210ENST00000477169 GAS2L1Q99501 681 aaPredicted RBP19.66■□□□□ 0.74
SMARCD3-210ENST00000477169 TUT1Q9H6E5 874 aaKnown RBP19.66■□□□□ 0.74
SMARCD3-210ENST00000477169 SH3GLB2Q9NR46 395 aa19.66■□□□□ 0.74
SMARCD3-210ENST00000477169 CHD9Q3L8U1 2897 aa19.66■□□□□ 0.74
SMARCD3-210ENST00000477169 GBF1Q92538 1859 aa19.66■□□□□ 0.74
SMARCD3-210ENST00000477169 ESYT2A0FGR8 921 aa19.65■□□□□ 0.74
SMARCD3-210ENST00000477169 LGALS2P05162 132 aa19.65■□□□□ 0.74
SMARCD3-210ENST00000477169 ADCY7P51828 1080 aa19.65■□□□□ 0.74
SMARCD3-210ENST00000477169 UBE2SQ16763 222 aa19.65■□□□□ 0.74
SMARCD3-210ENST00000477169 GIMAP8Q8ND71 665 aaPredicted RBP19.65■□□□□ 0.74
SMARCD3-210ENST00000477169 CCDC12Q8WUD4 166 aaPredicted RBP19.65■□□□□ 0.74
SMARCD3-210ENST00000477169 GPR20Q99678 358 aa19.65■□□□□ 0.74
SMARCD3-210ENST00000477169 ZMYND12Q9H0C1 365 aa19.65■□□□□ 0.74
SMARCD3-210ENST00000477169 PRDM12Q9H4Q4 367 aa19.65■□□□□ 0.74
SMARCD3-210ENST00000477169 PRUNE2Q8WUY3 3088 aa19.64■□□□□ 0.73
SMARCD3-210ENST00000477169 ADAMTS3O15072 1205 aa19.64■□□□□ 0.73
SMARCD3-210ENST00000477169 CXCL10P02778 98 aa19.64■□□□□ 0.73
SMARCD3-210ENST00000477169 ZNF200P98182 395 aaPredicted RBP19.64■□□□□ 0.73
SMARCD3-210ENST00000477169 HIC1Q14526 733 aa19.64■□□□□ 0.73
SMARCD3-210ENST00000477169 TRIM71Q2Q1W2 868 aaKnown RBP19.64■□□□□ 0.73
SMARCD3-210ENST00000477169 TEX2Q8IWB9 1127 aa19.64■□□□□ 0.73
SMARCD3-210ENST00000477169 CCDC148Q8NFR7 591 aa19.64■□□□□ 0.73
SMARCD3-210ENST00000477169 WASF1Q92558 559 aa19.64■□□□□ 0.73
SMARCD3-210ENST00000477169 GPRASP2Q96D09 838 aa19.64■□□□□ 0.73
SMARCD3-210ENST00000477169 CDHR1Q96JP9 859 aa19.64■□□□□ 0.73
SMARCD3-210ENST00000477169 TET1Q8NFU7 2136 aa19.64■□□□□ 0.73
SMARCD3-210ENST00000477169 C17orf102A2RUQ5 167 aa19.63■□□□□ 0.73
SMARCD3-210ENST00000477169 SPDYE3A6NKU9 549 aa19.63■□□□□ 0.73
SMARCD3-210ENST00000477169 MYOGP15173 224 aa19.63■□□□□ 0.73
SMARCD3-210ENST00000477169 HOXC8P31273 242 aa19.63■□□□□ 0.73
SMARCD3-210ENST00000477169 CUL4AQ13619 759 aa19.63■□□□□ 0.73
SMARCD3-210ENST00000477169 PPP2R2DQ66LE6 453 aa19.63■□□□□ 0.73
SMARCD3-210ENST00000477169 SERINC5Q86VE9 423 aa19.63■□□□□ 0.73
SMARCD3-210ENST00000477169 FAM177A1Q8N128 213 aaPredicted RBP19.63■□□□□ 0.73
SMARCD3-210ENST00000477169 GLT8D2Q9H1C3 349 aa19.63■□□□□ 0.73
SMARCD3-210ENST00000477169 C6orf50Q9HD87 102 aa19.63■□□□□ 0.73
SMARCD3-210ENST00000477169 PCDHA6Q9UN73 950 aa19.63■□□□□ 0.73
SMARCD3-210ENST00000477169 PCDHA8Q9Y5H6 950 aa19.63■□□□□ 0.73
SMARCD3-210ENST00000477169 MYO9BQ13459 2157 aa19.62■□□□□ 0.73
SMARCD3-210ENST00000477169 KIF28PB7ZC32 967 aa19.62■□□□□ 0.73
SMARCD3-210ENST00000477169 K7ELQ4 463 aaPredicted RBP19.62■□□□□ 0.73
SMARCD3-210ENST00000477169 MAFGO15525 162 aa19.62■□□□□ 0.73
SMARCD3-210ENST00000477169 NBNO60934 754 aa19.62■□□□□ 0.73
SMARCD3-210ENST00000477169 SMIM10L2AP0DMW4 78 aa19.62■□□□□ 0.73
SMARCD3-210ENST00000477169 SMIM10L2BP0DMW5 78 aa19.62■□□□□ 0.73
SMARCD3-210ENST00000477169 ITGB5P18084 799 aa19.62■□□□□ 0.73
SMARCD3-210ENST00000477169 CLK2P49760 499 aaKnown RBP19.62■□□□□ 0.73
SMARCD3-210ENST00000477169 NLRP5P59047 1200 aa19.62■□□□□ 0.73
SMARCD3-210ENST00000477169 HMGN5P82970 282 aaKnown RBP19.62■□□□□ 0.73
SMARCD3-210ENST00000477169 ZNF618Q5T7W0 954 aa19.62■□□□□ 0.73
SMARCD3-210ENST00000477169 CNKSR3Q6P9H4 555 aa19.62■□□□□ 0.73
SMARCD3-210ENST00000477169 TRAF7Q6Q0C0 670 aa19.62■□□□□ 0.73
SMARCD3-210ENST00000477169 ATP6V0A1Q93050 837 aa19.62■□□□□ 0.73
SMARCD3-210ENST00000477169 WNT8BQ93098 351 aa19.62■□□□□ 0.73
SMARCD3-210ENST00000477169 RNPEPQ9H4A4 650 aa19.62■□□□□ 0.73
SMARCD3-210ENST00000477169 EHMT1Q9H9B1 1298 aa19.62■□□□□ 0.73
SMARCD3-210ENST00000477169 GJB4Q9NTQ9 266 aa19.62■□□□□ 0.73
SMARCD3-210ENST00000477169 UBIAD1Q9Y5Z9 338 aa19.62■□□□□ 0.73
SMARCD3-210ENST00000477169 ATP9AO75110 1047 aa19.61■□□□□ 0.73
SMARCD3-210ENST00000477169 GNA11P29992 359 aa19.61■□□□□ 0.73
SMARCD3-210ENST00000477169 KCNJ6P48051 423 aa19.61■□□□□ 0.73
SMARCD3-210ENST00000477169 NPY5RQ15761 445 aa19.61■□□□□ 0.73
SMARCD3-210ENST00000477169 HERC6Q8IVU3 1022 aa19.61■□□□□ 0.73
SMARCD3-210ENST00000477169 PHF20Q9BVI0 1012 aa19.61■□□□□ 0.73
SMARCD3-210ENST00000477169 TMEM260Q9NX78 707 aa19.61■□□□□ 0.73
SMARCD3-210ENST00000477169 ZNF215Q9UL58 517 aaPredicted RBP19.61■□□□□ 0.73
SMARCD3-210ENST00000477169 KCNJ14Q9UNX9 436 aa19.61■□□□□ 0.73
SMARCD3-210ENST00000477169 DOCK5Q9H7D0 1870 aa19.6■□□□□ 0.73
SMARCD3-210ENST00000477169 ABHD14A-ACY1A0A1B0GW23 586 aa19.6■□□□□ 0.73
SMARCD3-210ENST00000477169 GNAT1P11488 350 aa19.6■□□□□ 0.73
SMARCD3-210ENST00000477169 KCNA2P16389 499 aa19.6■□□□□ 0.73
SMARCD3-210ENST00000477169 XBP1P17861 261 aa19.6■□□□□ 0.73
SMARCD3-210ENST00000477169 ADGRE1Q14246 886 aa19.6■□□□□ 0.73
SMARCD3-210ENST00000477169 JADE2Q9NQC1 790 aa19.6■□□□□ 0.73
SMARCD3-210ENST00000477169 CHD7Q9P2D1 2997 aa19.6■□□□□ 0.73
SMARCD3-210ENST00000477169 EMSYQ7Z589 1322 aa19.59■□□□□ 0.73
SMARCD3-210ENST00000477169 RSPH10B2B2RC85 870 aa19.59■□□□□ 0.73
SMARCD3-210ENST00000477169 TREHO43280 583 aa19.59■□□□□ 0.73
SMARCD3-210ENST00000477169 EFCAB14O75071 495 aa19.59■□□□□ 0.73
SMARCD3-210ENST00000477169 FOSP01100 380 aaPredicted RBP19.59■□□□□ 0.73
SMARCD3-210ENST00000477169 CA3P07451 260 aa19.59■□□□□ 0.73
SMARCD3-210ENST00000477169 RSPH10BP0C881 870 aa19.59■□□□□ 0.73
SMARCD3-210ENST00000477169 THPOP40225 353 aa19.59■□□□□ 0.73
SMARCD3-210ENST00000477169 FOSBP53539 338 aa19.59■□□□□ 0.73
SMARCD3-210ENST00000477169 WDR5P61964 334 aaKnown RBP19.59■□□□□ 0.73
SMARCD3-210ENST00000477169 MTMR1Q13613 665 aa19.59■□□□□ 0.73
SMARCD3-210ENST00000477169 IKBKEQ14164 716 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms