RNA–Protein interactions for RNA: ENST00000476664.1

LRCH3-215, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 227 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-215ENST00000476664 C12orf40Q86WS4 652 aa8.2□□□□□ -1.1
LRCH3-215ENST00000476664 MRPL41Q8IXM3 137 aaKnown RBP8.2□□□□□ -1.1
LRCH3-215ENST00000476664 CLRN3Q8NCR9 226 aa8.2□□□□□ -1.1
LRCH3-215ENST00000476664 SLC5A5Q92911 643 aa8.2□□□□□ -1.1
LRCH3-215ENST00000476664 FAM193BQ96PV7 902 aaPredicted RBP8.2□□□□□ -1.1
LRCH3-215ENST00000476664 NUCKS1Q9H1E3 243 aaKnown RBP8.2□□□□□ -1.1
LRCH3-215ENST00000476664 SH2B1Q9NRF2 756 aaPredicted RBP8.2□□□□□ -1.1
LRCH3-215ENST00000476664 SPTLC3Q9NUV7 552 aa8.2□□□□□ -1.1
LRCH3-215ENST00000476664 B4GALT6Q9UBX8 382 aa8.2□□□□□ -1.1
LRCH3-215ENST00000476664 TJP2Q9UDY2 1190 aa8.2□□□□□ -1.1
LRCH3-215ENST00000476664 POLG2Q9UHN1 485 aa8.2□□□□□ -1.1
LRCH3-215ENST00000476664 DNM3Q9UQ16 869 aa8.2□□□□□ -1.1
LRCH3-215ENST00000476664 FMN2Q9NZ56 1722 aa8.2□□□□□ -1.1
LRCH3-215ENST00000476664 CRYBG1Q9Y4K1 1723 aa8.2□□□□□ -1.1
LRCH3-215ENST00000476664 ATP7BP35670 1465 aa8.19□□□□□ -1.1
LRCH3-215ENST00000476664 H7C1W4 665 aa8.19□□□□□ -1.1
LRCH3-215ENST00000476664 ANP32CO43423 234 aa8.19□□□□□ -1.1
LRCH3-215ENST00000476664 HRGP04196 525 aa8.19□□□□□ -1.1
LRCH3-215ENST00000476664 CD33P20138 364 aa8.19□□□□□ -1.1
LRCH3-215ENST00000476664 TM4SF4P48230 202 aa8.19□□□□□ -1.1
LRCH3-215ENST00000476664 CTCFP49711 727 aaPredicted RBP8.19□□□□□ -1.1
LRCH3-215ENST00000476664 TBC1D8BQ0IIM8 1120 aa8.19□□□□□ -1.1
LRCH3-215ENST00000476664 DDB1Q16531 1140 aa8.19□□□□□ -1.1
LRCH3-215ENST00000476664 ZNF827Q17R98 1081 aa8.19□□□□□ -1.1
LRCH3-215ENST00000476664 PRR16Q569H4 304 aa8.19□□□□□ -1.1
LRCH3-215ENST00000476664 DACT2Q5SW24 774 aa8.19□□□□□ -1.1
LRCH3-215ENST00000476664 ABHD17CQ6PCB6 329 aa8.19□□□□□ -1.1
LRCH3-215ENST00000476664 FAM35AQ86V20 835 aa8.19□□□□□ -1.1
LRCH3-215ENST00000476664 HID1Q8IV36 788 aa8.19□□□□□ -1.1
LRCH3-215ENST00000476664 IGSF22Q8N9C0 903 aa8.19□□□□□ -1.1
LRCH3-215ENST00000476664 TMEM145Q8NBT3 493 aa8.19□□□□□ -1.1
LRCH3-215ENST00000476664 CHTF18Q8WVB6 975 aa8.19□□□□□ -1.1
LRCH3-215ENST00000476664 CCDC138Q96M89 665 aa8.19□□□□□ -1.1
LRCH3-215ENST00000476664 NKX2-4Q9H2Z4 354 aa8.19□□□□□ -1.1
LRCH3-215ENST00000476664 CGGBP1Q9UFW8 167 aaPredicted RBP8.19□□□□□ -1.1
LRCH3-215ENST00000476664 QSER1Q2KHR3 1735 aa8.19□□□□□ -1.1
LRCH3-215ENST00000476664 PHRF1Q9P1Y6 1649 aaKnown RBP8.18□□□□□ -1.1
LRCH3-215ENST00000476664 FIGNL2A6NMB9 653 aa8.18□□□□□ -1.1
LRCH3-215ENST00000476664 DLL1O00548 723 aa8.18□□□□□ -1.1
LRCH3-215ENST00000476664 BNIP3LO60238 219 aa8.18□□□□□ -1.1
LRCH3-215ENST00000476664 ZNF862O60290 1169 aa8.18□□□□□ -1.1
LRCH3-215ENST00000476664 SCG5P05408 212 aa8.18□□□□□ -1.1
LRCH3-215ENST00000476664 SLC5A1P13866 664 aa8.18□□□□□ -1.1
LRCH3-215ENST00000476664 HSD3B1P14060 373 aa8.18□□□□□ -1.1
LRCH3-215ENST00000476664 CPB1P15086 417 aa8.18□□□□□ -1.1
LRCH3-215ENST00000476664 SMPD1P17405 629 aa8.18□□□□□ -1.1
LRCH3-215ENST00000476664 LBX1P52954 281 aa8.18□□□□□ -1.1
LRCH3-215ENST00000476664 C19orf57Q0VDD7 668 aa8.18□□□□□ -1.1
LRCH3-215ENST00000476664 IFIT5Q13325 482 aaKnown RBP8.18□□□□□ -1.1
LRCH3-215ENST00000476664 PDE1CQ14123 709 aaPredicted RBP8.18□□□□□ -1.1
LRCH3-215ENST00000476664 SLC35F1Q5T1Q4 408 aa8.18□□□□□ -1.1
LRCH3-215ENST00000476664 PPP4R3AQ6IN85 833 aa8.18□□□□□ -1.1
LRCH3-215ENST00000476664 ELMSAN1Q6PJG2 1045 aa8.18□□□□□ -1.1
LRCH3-215ENST00000476664 LVRNQ6Q4G3 990 aa8.18□□□□□ -1.1
LRCH3-215ENST00000476664 RIPOR1Q6ZS17 1223 aa8.18□□□□□ -1.1
LRCH3-215ENST00000476664 MAATS1Q7Z4T9 603 aa8.18□□□□□ -1.1
LRCH3-215ENST00000476664 ZC3H7AQ8IWR0 971 aaKnown RBP8.18□□□□□ -1.1
LRCH3-215ENST00000476664 C7orf61Q8IZ16 206 aa8.18□□□□□ -1.1
LRCH3-215ENST00000476664 TCP11L2Q8N4U5 519 aa8.18□□□□□ -1.1
LRCH3-215ENST00000476664 CHST14Q8NCH0 376 aa8.18□□□□□ -1.1
LRCH3-215ENST00000476664 ADCY4Q8NFM4 1077 aa8.18□□□□□ -1.1
LRCH3-215ENST00000476664 ENOX1Q8TC92 643 aaKnown RBP8.18□□□□□ -1.1
LRCH3-215ENST00000476664 DIO2Q92813 273 aa8.18□□□□□ -1.1
LRCH3-215ENST00000476664 SGCZQ96LD1 299 aa8.18□□□□□ -1.1
LRCH3-215ENST00000476664 ZFYVE21Q9BQ24 234 aa8.18□□□□□ -1.1
LRCH3-215ENST00000476664 PRDM6Q9NQX0 595 aa8.18□□□□□ -1.1
LRCH3-215ENST00000476664 NDFIP2Q9NV92 336 aa8.18□□□□□ -1.1
LRCH3-215ENST00000476664 ASAP1Q9ULH1 1129 aa8.18□□□□□ -1.1
LRCH3-215ENST00000476664 TRIM33Q9UPN9 1127 aa8.18□□□□□ -1.1
LRCH3-215ENST00000476664 LRCH1Q9Y2L9 728 aa8.18□□□□□ -1.1
LRCH3-215ENST00000476664 CSADQ9Y600 493 aa8.18□□□□□ -1.1
LRCH3-215ENST00000476664 FANCGO15287 622 aa8.17□□□□□ -1.1
LRCH3-215ENST00000476664 PCDHGA12O60330 932 aa8.17□□□□□ -1.1
LRCH3-215ENST00000476664 SLFN14P0C7P3 912 aa8.17□□□□□ -1.1
LRCH3-215ENST00000476664 EPHA1P21709 976 aa8.17□□□□□ -1.1
LRCH3-215ENST00000476664 MAOBP27338 520 aa8.17□□□□□ -1.1
LRCH3-215ENST00000476664 GRK6P43250 576 aa8.17□□□□□ -1.1
LRCH3-215ENST00000476664 FAM193AP78312 1265 aa8.17□□□□□ -1.1
LRCH3-215ENST00000476664 TRIM14Q14142 442 aa8.17□□□□□ -1.1
LRCH3-215ENST00000476664 UBAP2LQ14157 1087 aaKnown RBP8.17□□□□□ -1.1
LRCH3-215ENST00000476664 SCARF1Q14162 830 aa8.17□□□□□ -1.1
LRCH3-215ENST00000476664 LRRC32Q14392 662 aa8.17□□□□□ -1.1
LRCH3-215ENST00000476664 SF1Q15637 639 aaKnown RBP8.17□□□□□ -1.1
LRCH3-215ENST00000476664 CHRNA2Q15822 529 aa8.17□□□□□ -1.1
LRCH3-215ENST00000476664 ZC3H12AQ5D1E8 599 aaKnown RBP8.17□□□□□ -1.1
LRCH3-215ENST00000476664 MRPL14Q6P1L8 145 aaKnown RBP8.17□□□□□ -1.1
LRCH3-215ENST00000476664 SKAP1Q86WV1 359 aa8.17□□□□□ -1.1
LRCH3-215ENST00000476664 WNT8BQ93098 351 aa8.17□□□□□ -1.1
LRCH3-215ENST00000476664 KIFC2Q96AC6 838 aa8.17□□□□□ -1.1
LRCH3-215ENST00000476664 ERP27Q96DN0 273 aa8.17□□□□□ -1.1
LRCH3-215ENST00000476664 FAM163AQ96GL9 167 aaPredicted RBP8.17□□□□□ -1.1
LRCH3-215ENST00000476664 SMG9Q9H0W8 520 aaKnown RBP8.17□□□□□ -1.1
LRCH3-215ENST00000476664 GP6Q9HCN6 339 aa8.17□□□□□ -1.1
LRCH3-215ENST00000476664 ARFGAP3Q9NP61 516 aa8.17□□□□□ -1.1
LRCH3-215ENST00000476664 EVLQ9UI08 416 aaPredicted RBP8.17□□□□□ -1.1
LRCH3-215ENST00000476664 PCDHGA9Q9Y5G4 932 aaKnown RBP8.17□□□□□ -1.1
LRCH3-215ENST00000476664 PCDHGA8Q9Y5G5 932 aa8.17□□□□□ -1.1
LRCH3-215ENST00000476664 PCDHGA7Q9Y5G6 932 aa8.17□□□□□ -1.1
LRCH3-215ENST00000476664 PCDHGA6Q9Y5G7 932 aa8.17□□□□□ -1.1
LRCH3-215ENST00000476664 PCDHGA3Q9Y5H0 932 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms