RNA–Protein interactions for RNA: ENST00000476590.1

CD55-208, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 1 (best)

Gene CD55, Length 2,163 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-208ENST00000476590 TRIM71Q2Q1W2 868 aaKnown RBP4.53□□□□□ -1.68
CD55-208ENST00000476590 CCDC14Q49A88 953 aa4.53□□□□□ -1.68
CD55-208ENST00000476590 PCNX4Q63HM2 1172 aa4.53□□□□□ -1.68
CD55-208ENST00000476590 KLC3Q6P597 504 aa4.53□□□□□ -1.68
CD55-208ENST00000476590 TMEM154Q6P9G4 183 aa4.53□□□□□ -1.68
CD55-208ENST00000476590 KRT27Q7Z3Y8 459 aa4.53□□□□□ -1.68
CD55-208ENST00000476590 NLRP14Q86W24 1093 aa4.53□□□□□ -1.68
CD55-208ENST00000476590 PALB2Q86YC2 1186 aa4.53□□□□□ -1.68
CD55-208ENST00000476590 SCUBE1Q8IWY4 988 aa4.53□□□□□ -1.68
CD55-208ENST00000476590 CHCHD4Q8N4Q1 142 aa4.53□□□□□ -1.68
CD55-208ENST00000476590 PAF1Q8N7H5 531 aa4.53□□□□□ -1.68
CD55-208ENST00000476590 SPERTQ8NA61 448 aa4.53□□□□□ -1.68
CD55-208ENST00000476590 MYCBPAPQ8TBZ2 947 aa4.53□□□□□ -1.68
CD55-208ENST00000476590 HIC2Q96JB3 615 aa4.53□□□□□ -1.68
CD55-208ENST00000476590 SPATA17Q96L03 361 aa4.53□□□□□ -1.68
CD55-208ENST00000476590 CCT8L2Q96SF2 557 aa4.53□□□□□ -1.68
CD55-208ENST00000476590 SYT15Q9BQS2 421 aa4.53□□□□□ -1.68
CD55-208ENST00000476590 SIKE1Q9BRV8 207 aa4.53□□□□□ -1.68
CD55-208ENST00000476590 OSBPL7Q9BZF2 842 aa4.53□□□□□ -1.68
CD55-208ENST00000476590 NDST4Q9H3R1 872 aa4.53□□□□□ -1.68
CD55-208ENST00000476590 C12orf49Q9H741 205 aa4.53□□□□□ -1.68
CD55-208ENST00000476590 DCTPP1Q9H773 170 aa4.53□□□□□ -1.68
CD55-208ENST00000476590 ARNT2Q9HBZ2 717 aa4.53□□□□□ -1.68
CD55-208ENST00000476590 SCHIP1Q9P0W5 487 aaPredicted RBP4.53□□□□□ -1.68
CD55-208ENST00000476590 FAM184BQ9ULE4 1060 aa4.53□□□□□ -1.68
CD55-208ENST00000476590 LZTS1Q9Y250 596 aa4.53□□□□□ -1.68
CD55-208ENST00000476590 ITSN2Q9NZM3 1697 aa4.52□□□□□ -1.69
CD55-208ENST00000476590 RGS12O14924 1447 aa4.52□□□□□ -1.69
CD55-208ENST00000476590 A0A0J9YVX5 310 aa4.52□□□□□ -1.69
CD55-208ENST00000476590 SPECC1L-ADORA2AF8WAN1 911 aa4.52□□□□□ -1.69
CD55-208ENST00000476590 AGPSO00116 658 aa4.52□□□□□ -1.69
CD55-208ENST00000476590 TSPAN1O60635 241 aa4.52□□□□□ -1.69
CD55-208ENST00000476590 HIP1RO75146 1068 aa4.52□□□□□ -1.69
CD55-208ENST00000476590 FBXO21O94952 628 aa4.52□□□□□ -1.69
CD55-208ENST00000476590 LCA5LO95447 670 aa4.52□□□□□ -1.69
CD55-208ENST00000476590 GSTA1P08263 222 aa4.52□□□□□ -1.69
CD55-208ENST00000476590 RHOXF2BP0C7M4 288 aa4.52□□□□□ -1.69
CD55-208ENST00000476590 ATP2A2P16615 1042 aaKnown RBP4.52□□□□□ -1.69
CD55-208ENST00000476590 POLR2EP19388 210 aaKnown RBP4.52□□□□□ -1.69
CD55-208ENST00000476590 ACADVLP49748 655 aa4.52□□□□□ -1.69
CD55-208ENST00000476590 SERPINB8P50452 374 aa4.52□□□□□ -1.69
CD55-208ENST00000476590 TUBP50607 506 aa4.52□□□□□ -1.69
CD55-208ENST00000476590 NEK4P51957 841 aa4.52□□□□□ -1.69
CD55-208ENST00000476590 PIP4K2BP78356 416 aa4.52□□□□□ -1.69
CD55-208ENST00000476590 LMNB2Q03252 620 aa4.52□□□□□ -1.69
CD55-208ENST00000476590 PDCLQ13371 301 aa4.52□□□□□ -1.69
CD55-208ENST00000476590 LSAMPQ13449 338 aa4.52□□□□□ -1.69
CD55-208ENST00000476590 TUBA3CQ13748 450 aa4.52□□□□□ -1.69
CD55-208ENST00000476590 SPIDRQ14159 915 aa4.52□□□□□ -1.69
CD55-208ENST00000476590 ZNF268Q14587 947 aaPredicted RBP4.52□□□□□ -1.69
CD55-208ENST00000476590 PPP1R7Q15435 360 aa4.52□□□□□ -1.69
CD55-208ENST00000476590 CAMK4Q16566 473 aa4.52□□□□□ -1.69
CD55-208ENST00000476590 STX1AQ16623 288 aa4.52□□□□□ -1.69
CD55-208ENST00000476590 PDCD4Q53EL6 469 aaKnown RBP4.52□□□□□ -1.69
CD55-208ENST00000476590 RNF220Q5VTB9 566 aa4.52□□□□□ -1.69
CD55-208ENST00000476590 KCTD16Q68DU8 428 aa4.52□□□□□ -1.69
CD55-208ENST00000476590 ATL3Q6DD88 541 aa4.52□□□□□ -1.69
CD55-208ENST00000476590 OR52E8Q6IFG1 317 aa4.52□□□□□ -1.69
CD55-208ENST00000476590 PPP4R4Q6NUP7 873 aa4.52□□□□□ -1.69
CD55-208ENST00000476590 ZCCHC8Q6NZY4 707 aaKnown RBP4.52□□□□□ -1.69
CD55-208ENST00000476590 CKAP2LQ8IYA6 745 aa4.52□□□□□ -1.69
CD55-208ENST00000476590 LSMEM2Q8N112 164 aa4.52□□□□□ -1.69
CD55-208ENST00000476590 NDUFAF2Q8N183 169 aa4.52□□□□□ -1.69
CD55-208ENST00000476590 LINC00469Q8N7U9 141 aa4.52□□□□□ -1.69
CD55-208ENST00000476590 CCDC63Q8NA47 563 aa4.52□□□□□ -1.69
CD55-208ENST00000476590 LILRB1Q8NHL6 650 aaPredicted RBP4.52□□□□□ -1.69
CD55-208ENST00000476590 GSDMBQ8TAX9 411 aa4.52□□□□□ -1.69
CD55-208ENST00000476590 ANKRD49Q8WVL7 239 aa4.52□□□□□ -1.69
CD55-208ENST00000476590 PTPRN2Q92932 1015 aa4.52□□□□□ -1.69
CD55-208ENST00000476590 LENG1Q96BZ8 264 aaPredicted RBP4.52□□□□□ -1.69
CD55-208ENST00000476590 HAUS1Q96CS2 278 aa4.52□□□□□ -1.69
CD55-208ENST00000476590 CCDC42Q96M95 316 aa4.52□□□□□ -1.69
CD55-208ENST00000476590 TUBGCP5Q96RT8 1024 aa4.52□□□□□ -1.69
CD55-208ENST00000476590 WDR24Q96S15 920 aa4.52□□□□□ -1.69
CD55-208ENST00000476590 SETDB2Q96T68 719 aa4.52□□□□□ -1.69
CD55-208ENST00000476590 MPHOSPH9Q99550 1183 aa4.52□□□□□ -1.69
CD55-208ENST00000476590 RHOXF2Q9BQY4 288 aa4.52□□□□□ -1.69
CD55-208ENST00000476590 FTOQ9C0B1 505 aaKnown RBP eCLIP4.52□□□□□ -1.69
CD55-208ENST00000476590 TPK1Q9H3S4 243 aa4.52□□□□□ -1.69
CD55-208ENST00000476590 EURLQ9NYK6 297 aa4.52□□□□□ -1.69
CD55-208ENST00000476590 CABP1Q9NZU7 370 aa4.52□□□□□ -1.69
CD55-208ENST00000476590 IP6K2Q9UHH9 426 aa4.52□□□□□ -1.69
CD55-208ENST00000476590 LNPEPQ9UIQ6 1025 aa4.52□□□□□ -1.69
CD55-208ENST00000476590 TNNQ9UQP3 1299 aa4.52□□□□□ -1.69
CD55-208ENST00000476590 INPP5FQ9Y2H2 1132 aa4.52□□□□□ -1.69
CD55-208ENST00000476590 SLC45A1Q9Y2W3 748 aa4.52□□□□□ -1.69
CD55-208ENST00000476590 TSC22D4Q9Y3Q8 395 aa4.52□□□□□ -1.69
CD55-208ENST00000476590 FAM32AQ9Y421 112 aaKnown RBP4.52□□□□□ -1.69
CD55-208ENST00000476590 SQORQ9Y6N5 450 aa4.52□□□□□ -1.69
CD55-208ENST00000476590 COMMD3-BMI1R4GMX3 469 aa4.52□□□□□ -1.69
CD55-208ENST00000476590 EFCAB5A4FU69 1503 aa4.52□□□□□ -1.69
CD55-208ENST00000476590 IFT140Q96RY7 1462 aa4.51□□□□□ -1.69
CD55-208ENST00000476590 FANCD2Q9BXW9 1451 aa4.51□□□□□ -1.69
CD55-208ENST00000476590 WDR62O43379 1518 aa4.51□□□□□ -1.69
CD55-208ENST00000476590 CTAGE15A4D2H0 777 aa4.51□□□□□ -1.69
CD55-208ENST00000476590 MAP3K7O43318 606 aa4.51□□□□□ -1.69
CD55-208ENST00000476590 CTAGE8P0CG41 777 aa4.51□□□□□ -1.69
CD55-208ENST00000476590 SRGNP10124 158 aa4.51□□□□□ -1.69
CD55-208ENST00000476590 ATP6V1C1P21283 382 aa4.51□□□□□ -1.69
CD55-208ENST00000476590 MAN1A1P33908 653 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms