RNA–Protein interactions for RNA: ENST00000476387.1

COL1A1-205, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-205ENST00000476387 PDIA3P30101 505 aaKnown RBP18.52■□□□□ 0.56
COL1A1-205ENST00000476387 EVCP57679 992 aa18.52■□□□□ 0.56
COL1A1-205ENST00000476387 ANAPC15P60006 121 aa18.52■□□□□ 0.56
COL1A1-205ENST00000476387 CCT2P78371 535 aaKnown RBP18.52■□□□□ 0.56
COL1A1-205ENST00000476387 PFKFB3Q16875 520 aaPredicted RBP18.52■□□□□ 0.56
COL1A1-205ENST00000476387 TJAP1Q5JTD0 557 aa18.52■□□□□ 0.56
COL1A1-205ENST00000476387 TYW1BQ6NUM6 668 aa18.52■□□□□ 0.56
COL1A1-205ENST00000476387 CCDC12Q8WUD4 166 aaPredicted RBP18.52■□□□□ 0.56
COL1A1-205ENST00000476387 ATP6V0A1Q93050 837 aa18.52■□□□□ 0.56
COL1A1-205ENST00000476387 PDRG1Q9NUG6 133 aa18.52■□□□□ 0.56
COL1A1-205ENST00000476387 PCDHA6Q9UN73 950 aa18.52■□□□□ 0.56
COL1A1-205ENST00000476387 PCDHA8Q9Y5H6 950 aa18.52■□□□□ 0.56
COL1A1-205ENST00000476387 SMCO2A6NFE2 343 aa18.51■□□□□ 0.55
COL1A1-205ENST00000476387 TLL1O43897 1013 aa18.51■□□□□ 0.55
COL1A1-205ENST00000476387 FOSP01100 380 aaPredicted RBP18.51■□□□□ 0.55
COL1A1-205ENST00000476387 GNAT1P11488 350 aa18.51■□□□□ 0.55
COL1A1-205ENST00000476387 POU3F3P20264 500 aaPredicted RBP18.51■□□□□ 0.55
COL1A1-205ENST00000476387 TAP1Q03518 808 aa18.51■□□□□ 0.55
COL1A1-205ENST00000476387 IKBKEQ14164 716 aa18.51■□□□□ 0.55
COL1A1-205ENST00000476387 MBTPS1Q14703 1052 aa18.51■□□□□ 0.55
COL1A1-205ENST00000476387 ATXN2LQ8WWM7 1075 aaKnown RBP18.51■□□□□ 0.55
COL1A1-205ENST00000476387 PPM1EQ8WY54 764 aa18.51■□□□□ 0.55
COL1A1-205ENST00000476387 THEGQ9P2T0 379 aa18.51■□□□□ 0.55
COL1A1-205ENST00000476387 SPTBN5Q9NRC6 3674 aaKnown RBP18.51■□□□□ 0.55
COL1A1-205ENST00000476387 RSPH10B2B2RC85 870 aa18.5■□□□□ 0.55
COL1A1-205ENST00000476387 PRPF3O43395 683 aaKnown RBP18.5■□□□□ 0.55
COL1A1-205ENST00000476387 LGR5O75473 907 aa18.5■□□□□ 0.55
COL1A1-205ENST00000476387 RSPH10BP0C881 870 aa18.5■□□□□ 0.55
COL1A1-205ENST00000476387 IFNAR1P17181 557 aa18.5■□□□□ 0.55
COL1A1-205ENST00000476387 THPOP40225 353 aa18.5■□□□□ 0.55
COL1A1-205ENST00000476387 PHKBQ93100 1093 aa18.5■□□□□ 0.55
COL1A1-205ENST00000476387 ZNF274Q96GC6 653 aaPredicted RBP18.5■□□□□ 0.55
COL1A1-205ENST00000476387 SLC26A6Q9BXS9 759 aa18.5■□□□□ 0.55
COL1A1-205ENST00000476387 RNF26Q9BY78 433 aaPredicted RBP18.5■□□□□ 0.55
COL1A1-205ENST00000476387 RNPEPQ9H4A4 650 aa18.5■□□□□ 0.55
COL1A1-205ENST00000476387 NCOA5Q9HCD5 579 aaKnown RBP18.5■□□□□ 0.55
COL1A1-205ENST00000476387 KAT6AQ92794 2004 aa18.49■□□□□ 0.55
COL1A1-205ENST00000476387 CPLX1O14810 134 aa18.49■□□□□ 0.55
COL1A1-205ENST00000476387 TREHO43280 583 aa18.49■□□□□ 0.55
COL1A1-205ENST00000476387 KCNA2P16389 499 aa18.49■□□□□ 0.55
COL1A1-205ENST00000476387 ITGB5P18084 799 aa18.49■□□□□ 0.55
COL1A1-205ENST00000476387 DEFB103AP81534 67 aa18.49■□□□□ 0.55
COL1A1-205ENST00000476387 AP3B2Q13367 1082 aa18.49■□□□□ 0.55
COL1A1-205ENST00000476387 CCDC85BQ15834 202 aaPredicted RBP18.49■□□□□ 0.55
COL1A1-205ENST00000476387 TCTN1Q2MV58 587 aa18.49■□□□□ 0.55
COL1A1-205ENST00000476387 CPLX2Q6PUV4 134 aaKnown RBP18.49■□□□□ 0.55
COL1A1-205ENST00000476387 TRIM50Q86XT4 487 aa18.49■□□□□ 0.55
COL1A1-205ENST00000476387 TRIM22Q8IYM9 498 aa18.49■□□□□ 0.55
COL1A1-205ENST00000476387 ZBED2Q9BTP6 218 aa18.49■□□□□ 0.55
COL1A1-205ENST00000476387 PRDM6Q9NQX0 595 aa18.49■□□□□ 0.55
COL1A1-205ENST00000476387 UBIAD1Q9Y5Z9 338 aa18.49■□□□□ 0.55
COL1A1-205ENST00000476387 PRRC2BQ5JSZ5 2229 aaKnown RBP18.49■□□□□ 0.55
COL1A1-205ENST00000476387 NCOR1O75376 2440 aa18.48■□□□□ 0.55
COL1A1-205ENST00000476387 MAFGO15525 162 aa18.48■□□□□ 0.55
COL1A1-205ENST00000476387 GTPBP6O43824 516 aaPredicted RBP18.48■□□□□ 0.55
COL1A1-205ENST00000476387 ARHGEF15O94989 841 aa18.48■□□□□ 0.55
COL1A1-205ENST00000476387 GJB5O95377 273 aa18.48■□□□□ 0.55
COL1A1-205ENST00000476387 MTMR1Q13613 665 aa18.48■□□□□ 0.55
COL1A1-205ENST00000476387 NTRK3Q16288 839 aa18.48■□□□□ 0.55
COL1A1-205ENST00000476387 CCDC148Q8NFR7 591 aa18.48■□□□□ 0.55
COL1A1-205ENST00000476387 RAD9AQ99638 391 aa18.48■□□□□ 0.55
COL1A1-205ENST00000476387 ANO3Q9BYT9 981 aa18.48■□□□□ 0.55
COL1A1-205ENST00000476387 TSPYL2Q9H2G4 693 aaPredicted RBP18.48■□□□□ 0.55
COL1A1-205ENST00000476387 C6orf50Q9HD87 102 aa18.48■□□□□ 0.55
COL1A1-205ENST00000476387 PTPRSQ13332 1948 aa18.48■□□□□ 0.55
COL1A1-205ENST00000476387 NRCAMQ92823 1304 aa18.48■□□□□ 0.55
COL1A1-205ENST00000476387 ESYT2A0FGR8 921 aa18.47■□□□□ 0.55
COL1A1-205ENST00000476387 EPOPA6NHQ4 379 aa18.47■□□□□ 0.55
COL1A1-205ENST00000476387 ATP9AO75110 1047 aa18.47■□□□□ 0.55
COL1A1-205ENST00000476387 PPFIA3O75145 1194 aa18.47■□□□□ 0.55
COL1A1-205ENST00000476387 ADAM17P78536 824 aa18.47■□□□□ 0.55
COL1A1-205ENST00000476387 SP4Q02446 784 aa18.47■□□□□ 0.55
COL1A1-205ENST00000476387 SSRP1Q08945 709 aaKnown RBP18.47■□□□□ 0.55
COL1A1-205ENST00000476387 STK3Q13188 491 aa18.47■□□□□ 0.55
COL1A1-205ENST00000476387 MKRN4PQ13434 485 aaPredicted RBP18.47■□□□□ 0.55
COL1A1-205ENST00000476387 PLEKHG4Q58EX7 1191 aa18.47■□□□□ 0.55
COL1A1-205ENST00000476387 UTP14CQ5TAP6 766 aaKnown RBP18.47■□□□□ 0.55
COL1A1-205ENST00000476387 LMBR1Q8WVP7 490 aa18.47■□□□□ 0.55
COL1A1-205ENST00000476387 ARNTL2Q8WYA1 636 aa18.47■□□□□ 0.55
COL1A1-205ENST00000476387 SEPT1Q8WYJ6 367 aa18.47■□□□□ 0.55
COL1A1-205ENST00000476387 PGBD1Q96JS3 809 aa18.47■□□□□ 0.55
COL1A1-205ENST00000476387 LARP6Q9BRS8 491 aaKnown RBP18.47■□□□□ 0.55
COL1A1-205ENST00000476387 CERS4Q9HA82 394 aa18.47■□□□□ 0.55
COL1A1-205ENST00000476387 JADE2Q9NQC1 790 aa18.47■□□□□ 0.55
COL1A1-205ENST00000476387 SETD4Q9NVD3 440 aa18.47■□□□□ 0.55
COL1A1-205ENST00000476387 TELO2Q9Y4R8 837 aa18.47■□□□□ 0.55
COL1A1-205ENST00000476387 MTCH2Q9Y6C9 303 aa18.47■□□□□ 0.55
COL1A1-205ENST00000476387 GNA11P29992 359 aa18.46■□□□□ 0.55
COL1A1-205ENST00000476387 TCF7P36402 384 aaPredicted RBP18.46■□□□□ 0.55
COL1A1-205ENST00000476387 MRPS5P82675 430 aaKnown RBP18.46■□□□□ 0.55
COL1A1-205ENST00000476387 ANKRD1Q15327 319 aa18.46■□□□□ 0.55
COL1A1-205ENST00000476387 PKN1Q16512 942 aa18.46■□□□□ 0.55
COL1A1-205ENST00000476387 MCTP2Q6DN12 878 aa18.46■□□□□ 0.55
COL1A1-205ENST00000476387 REXO1Q8N1G1 1221 aaKnown RBP18.46■□□□□ 0.55
COL1A1-205ENST00000476387 DBF4BQ8NFT6 615 aa18.46■□□□□ 0.55
COL1A1-205ENST00000476387 BICD2Q8TD16 824 aa18.46■□□□□ 0.55
COL1A1-205ENST00000476387 ASB2Q96Q27 587 aa18.46■□□□□ 0.55
COL1A1-205ENST00000476387 ZMYND12Q9H0C1 365 aa18.46■□□□□ 0.55
COL1A1-205ENST00000476387 TMEM260Q9NX78 707 aa18.46■□□□□ 0.55
COL1A1-205ENST00000476387 LCHNA4D1U4 455 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms