RNA–Protein interactions for RNA: ENST00000476360.1

XRCC5-208, Transcript of X-ray repair cross complementing 5, humanhuman

TSL 2

Gene XRCC5, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC5-208ENST00000476360 TSPY8P0CW00 308 aa10.27□□□□□ -0.77
XRCC5-208ENST00000476360 CALM1P0DP23 149 aa10.27□□□□□ -0.77
XRCC5-208ENST00000476360 CALM2P0DP24 149 aa10.27□□□□□ -0.77
XRCC5-208ENST00000476360 CALM3P0DP25 149 aa10.27□□□□□ -0.77
XRCC5-208ENST00000476360 U2AF2P26368 475 aaKnown RBP eCLIP10.27□□□□□ -0.774e-7■□□□□ 9.5
XRCC5-208ENST00000476360 WDR5P61964 334 aaKnown RBP10.27□□□□□ -0.77
XRCC5-208ENST00000476360 TRIM29Q14134 588 aa10.27□□□□□ -0.77
XRCC5-208ENST00000476360 SKIV2LQ15477 1246 aaKnown RBP10.27□□□□□ -0.77
XRCC5-208ENST00000476360 TRIM71Q2Q1W2 868 aaKnown RBP10.27□□□□□ -0.77
XRCC5-208ENST00000476360 TMEM31Q5JXX7 168 aa10.27□□□□□ -0.77
XRCC5-208ENST00000476360 GDF6Q6KF10 455 aaPredicted RBP10.27□□□□□ -0.77
XRCC5-208ENST00000476360 NFXL1Q6ZNB6 911 aa10.27□□□□□ -0.77
XRCC5-208ENST00000476360 MICU3Q86XE3 530 aa10.27□□□□□ -0.77
XRCC5-208ENST00000476360 TRIM22Q8IYM9 498 aa10.27□□□□□ -0.77
XRCC5-208ENST00000476360 ENGASEQ8NFI3 743 aa10.27□□□□□ -0.77
XRCC5-208ENST00000476360 GDPD5Q8WTR4 605 aa10.27□□□□□ -0.77
XRCC5-208ENST00000476360 SLC9A7Q96T83 725 aa10.27□□□□□ -0.77
XRCC5-208ENST00000476360 ALG1Q9BT22 464 aa10.27□□□□□ -0.77
XRCC5-208ENST00000476360 ZSWIM5Q9P217 1185 aa10.27□□□□□ -0.77
XRCC5-208ENST00000476360 CCPG1Q9ULG6 757 aa10.27□□□□□ -0.77
XRCC5-208ENST00000476360 TET1Q8NFU7 2136 aa10.27□□□□□ -0.77
XRCC5-208ENST00000476360 FAM237AA0A1B0GTK4 181 aa10.26□□□□□ -0.77
XRCC5-208ENST00000476360 KINO60870 393 aaKnown RBP10.26□□□□□ -0.77
XRCC5-208ENST00000476360 NR1I2O75469 434 aa10.26□□□□□ -0.77
XRCC5-208ENST00000476360 DDAH1O94760 285 aa10.26□□□□□ -0.77
XRCC5-208ENST00000476360 DEXIO95424 95 aa10.26□□□□□ -0.77
XRCC5-208ENST00000476360 SLC3A2P08195 630 aaKnown RBP10.26□□□□□ -0.77
XRCC5-208ENST00000476360 SUPT20HL2P0C7V6 817 aa10.26□□□□□ -0.77
XRCC5-208ENST00000476360 SSRP1Q08945 709 aaKnown RBP10.26□□□□□ -0.77
XRCC5-208ENST00000476360 STK38Q15208 465 aa10.26□□□□□ -0.77
XRCC5-208ENST00000476360 SEC23AQ15436 765 aa10.26□□□□□ -0.77
XRCC5-208ENST00000476360 STX1AQ16623 288 aa10.26□□□□□ -0.77
XRCC5-208ENST00000476360 RTN1Q16799 776 aa10.26□□□□□ -0.77
XRCC5-208ENST00000476360 AAK1Q2M2I8 961 aa10.26□□□□□ -0.77
XRCC5-208ENST00000476360 SASS6Q6UVJ0 657 aa10.26□□□□□ -0.77
XRCC5-208ENST00000476360 PIP4P2Q8N4L2 257 aa10.26□□□□□ -0.77
XRCC5-208ENST00000476360 UBAC1Q9BSL1 405 aa10.26□□□□□ -0.77
XRCC5-208ENST00000476360 RNF26Q9BY78 433 aaPredicted RBP10.26□□□□□ -0.77
XRCC5-208ENST00000476360 FAM217BQ9NTX9 383 aaPredicted RBP10.26□□□□□ -0.77
XRCC5-208ENST00000476360 RBM28Q9NW13 759 aaKnown RBP10.26□□□□□ -0.77
XRCC5-208ENST00000476360 COL20A1Q9P218 1284 aa10.26□□□□□ -0.77
XRCC5-208ENST00000476360 CTDP1Q9Y5B0 961 aaPredicted RBP10.26□□□□□ -0.77
XRCC5-208ENST00000476360 MRVI1Q9Y6F6 885 aa10.26□□□□□ -0.77
XRCC5-208ENST00000476360 MUC6Q6W4X9 2439 aa10.26□□□□□ -0.77
XRCC5-208ENST00000476360 BRWD1Q9NSI6 2320 aa10.25□□□□□ -0.77
XRCC5-208ENST00000476360 SCN5AQ14524 2016 aa10.25□□□□□ -0.77
XRCC5-208ENST00000476360 LINC01553A4QN01 128 aa10.25□□□□□ -0.77
XRCC5-208ENST00000476360 SPTLC2O15270 562 aa10.25□□□□□ -0.77
XRCC5-208ENST00000476360 RANBP6O60518 1105 aaKnown RBP10.25□□□□□ -0.77
XRCC5-208ENST00000476360 CDC27P30260 824 aa10.25□□□□□ -0.77
XRCC5-208ENST00000476360 RFC2P35250 354 aa10.25□□□□□ -0.77
XRCC5-208ENST00000476360 ME1P48163 572 aa10.25□□□□□ -0.77
XRCC5-208ENST00000476360 ERVK-21P61565 698 aa10.25□□□□□ -0.77
XRCC5-208ENST00000476360 RPS6P62753 249 aaKnown RBP10.25□□□□□ -0.77
XRCC5-208ENST00000476360 ZNF200P98182 395 aaPredicted RBP10.25□□□□□ -0.77
XRCC5-208ENST00000476360 ARHGAP1Q07960 439 aa10.25□□□□□ -0.77
XRCC5-208ENST00000476360 RBL2Q08999 1139 aa10.25□□□□□ -0.77
XRCC5-208ENST00000476360 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.25□□□□□ -0.77
XRCC5-208ENST00000476360 SESTD1Q86VW0 696 aa10.25□□□□□ -0.77
XRCC5-208ENST00000476360 IQCA1Q86XH1 822 aa10.25□□□□□ -0.77
XRCC5-208ENST00000476360 FAM178BQ8IXR5 827 aa10.25□□□□□ -0.77
XRCC5-208ENST00000476360 ZNF654Q8IZM8 581 aa10.25□□□□□ -0.77
XRCC5-208ENST00000476360 OR6J1Q8NGC5 347 aa10.25□□□□□ -0.77
XRCC5-208ENST00000476360 AFG1LQ8WV93 481 aa10.25□□□□□ -0.77
XRCC5-208ENST00000476360 TIGD1Q96MW7 591 aa10.25□□□□□ -0.77
XRCC5-208ENST00000476360 TMEM47Q9BQJ4 181 aa10.25□□□□□ -0.77
XRCC5-208ENST00000476360 TSPYL2Q9H2G4 693 aaPredicted RBP10.25□□□□□ -0.77
XRCC5-208ENST00000476360 CPVLQ9H3G5 476 aa10.25□□□□□ -0.77
XRCC5-208ENST00000476360 RTN4Q9NQC3 1192 aaKnown RBP10.25□□□□□ -0.77
XRCC5-208ENST00000476360 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.25□□□□□ -0.77
XRCC5-208ENST00000476360 STX8Q9UNK0 236 aa10.25□□□□□ -0.77
XRCC5-208ENST00000476360 FRMPD2Q68DX3 1309 aaPredicted RBP10.25□□□□□ -0.77
XRCC5-208ENST00000476360 SCN10AQ9Y5Y9 1956 aa10.25□□□□□ -0.77
XRCC5-208ENST00000476360 POTEB3A0JP26 581 aa10.24□□□□□ -0.77
XRCC5-208ENST00000476360 GOLGA6L6A8MZA4 724 aa10.24□□□□□ -0.77
XRCC5-208ENST00000476360 DTNBO60941 627 aa10.24□□□□□ -0.77
XRCC5-208ENST00000476360 GJB5O95377 273 aa10.24□□□□□ -0.77
XRCC5-208ENST00000476360 SNHG28P0DPA3 235 aa10.24□□□□□ -0.77
XRCC5-208ENST00000476360 PDHBP11177 359 aa10.24□□□□□ -0.77
XRCC5-208ENST00000476360 IL9P15248 144 aa10.24□□□□□ -0.77
XRCC5-208ENST00000476360 CMA1P23946 247 aa10.24□□□□□ -0.77
XRCC5-208ENST00000476360 CPT1AP50416 773 aa10.24□□□□□ -0.77
XRCC5-208ENST00000476360 PDE4BQ07343 736 aa10.24□□□□□ -0.77
XRCC5-208ENST00000476360 SNW1Q13573 536 aaKnown RBP10.24□□□□□ -0.77
XRCC5-208ENST00000476360 COL19A1Q14993 1142 aa10.24□□□□□ -0.77
XRCC5-208ENST00000476360 SLC39A14Q15043 492 aa10.24□□□□□ -0.77
XRCC5-208ENST00000476360 SAFBQ15424 915 aaKnown RBP eCLIP10.24□□□□□ -0.77
XRCC5-208ENST00000476360 SF3A1Q15459 793 aaKnown RBP10.24□□□□□ -0.77
XRCC5-208ENST00000476360 LY6KQ17RY6 165 aa10.24□□□□□ -0.77
XRCC5-208ENST00000476360 LEXMQ3ZCV2 418 aa10.24□□□□□ -0.77
XRCC5-208ENST00000476360 CCDC178Q5BJE1 867 aa10.24□□□□□ -0.77
XRCC5-208ENST00000476360 SYDE2Q5VT97 1194 aa10.24□□□□□ -0.77
XRCC5-208ENST00000476360 POTEBQ6S5H4 581 aa10.24□□□□□ -0.77
XRCC5-208ENST00000476360 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.24□□□□□ -0.77
XRCC5-208ENST00000476360 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.24□□□□□ -0.77
XRCC5-208ENST00000476360 ELOA2Q8IYF1 753 aaPredicted RBP10.24□□□□□ -0.77
XRCC5-208ENST00000476360 FMR1NBQ8N0W7 255 aaPredicted RBP10.24□□□□□ -0.77
XRCC5-208ENST00000476360 FAM177A1Q8N128 213 aaPredicted RBP10.24□□□□□ -0.77
XRCC5-208ENST00000476360 FSIP1Q8NA03 581 aa10.24□□□□□ -0.77
XRCC5-208ENST00000476360 FOXP1Q9H334 677 aaPredicted RBP10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms