RNA–Protein interactions for RNA: ENST00000476215.5

PTCD3-211, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-211ENST00000476215 KPNA6O60684 536 aa7.06□□□□□ -1.28
PTCD3-211ENST00000476215 NPTXRO95502 500 aa7.06□□□□□ -1.28
PTCD3-211ENST00000476215 KRT15P19012 456 aa7.06□□□□□ -1.28
PTCD3-211ENST00000476215 MC3RP41968 323 aa7.06□□□□□ -1.28
PTCD3-211ENST00000476215 FILIP1Q7Z7B0 1213 aa7.06□□□□□ -1.28
PTCD3-211ENST00000476215 LINC00482Q8N8I6 264 aa7.06□□□□□ -1.28
PTCD3-211ENST00000476215 DDX1Q92499 740 aaKnown RBP7.06□□□□□ -1.28
PTCD3-211ENST00000476215 WNK4Q96J92 1243 aa7.06□□□□□ -1.28
PTCD3-211ENST00000476215 CELF4Q9BZC1 486 aaKnown RBP7.06□□□□□ -1.28
PTCD3-211ENST00000476215 ZCCHC4Q9H5U6 513 aa7.06□□□□□ -1.28
PTCD3-211ENST00000476215 PCDH18Q9HCL0 1135 aa7.06□□□□□ -1.28
PTCD3-211ENST00000476215 PALD1Q9ULE6 856 aa7.06□□□□□ -1.28
PTCD3-211ENST00000476215 PMF1-BGLAPU3KQ54 211 aa7.06□□□□□ -1.28
PTCD3-211ENST00000476215 ANKRD62A6NC57 917 aa7.05□□□□□ -1.28
PTCD3-211ENST00000476215 M0R2C6 588 aa7.05□□□□□ -1.28
PTCD3-211ENST00000476215 MAFKO60675 156 aa7.05□□□□□ -1.28
PTCD3-211ENST00000476215 GLRX3O76003 335 aaKnown RBP7.05□□□□□ -1.28
PTCD3-211ENST00000476215 PDE6AP16499 860 aa7.05□□□□□ -1.28
PTCD3-211ENST00000476215 GPR19Q15760 415 aa7.05□□□□□ -1.28
PTCD3-211ENST00000476215 TMEM177Q53S58 311 aa7.05□□□□□ -1.28
PTCD3-211ENST00000476215 EMC4Q5J8M3 183 aa7.05□□□□□ -1.28
PTCD3-211ENST00000476215 CDCA2Q69YH5 1023 aaPredicted RBP7.05□□□□□ -1.28
PTCD3-211ENST00000476215 LIPIQ6XZB0 460 aa7.05□□□□□ -1.28
PTCD3-211ENST00000476215 MILR1Q7Z6M3 343 aa7.05□□□□□ -1.28
PTCD3-211ENST00000476215 OSTM1Q86WC4 334 aa7.05□□□□□ -1.28
PTCD3-211ENST00000476215 AHI1Q8N157 1196 aa7.05□□□□□ -1.28
PTCD3-211ENST00000476215 PPM1KQ8N3J5 372 aa7.05□□□□□ -1.28
PTCD3-211ENST00000476215 KRTAP4-9Q9BYQ8 210 aa7.05□□□□□ -1.28
PTCD3-211ENST00000476215 BCAS3Q9H6U6 928 aa7.05□□□□□ -1.28
PTCD3-211ENST00000476215 SPC25Q9HBM1 224 aa7.05□□□□□ -1.28
PTCD3-211ENST00000476215 DSEQ9UL01 958 aa7.05□□□□□ -1.28
PTCD3-211ENST00000476215 ZNF652Q9Y2D9 606 aa7.05□□□□□ -1.28
PTCD3-211ENST00000476215 PCDHB4Q9Y5E5 795 aa7.05□□□□□ -1.28
PTCD3-211ENST00000476215 GSG1L2A8MUP6 293 aa7.04□□□□□ -1.28
PTCD3-211ENST00000476215 DNAJC6O75061 913 aa7.04□□□□□ -1.28
PTCD3-211ENST00000476215 SASH1O94885 1247 aa7.04□□□□□ -1.28
PTCD3-211ENST00000476215 C8BP07358 591 aa7.04□□□□□ -1.28
PTCD3-211ENST00000476215 POU3F2P20265 443 aaPredicted RBP7.04□□□□□ -1.28
PTCD3-211ENST00000476215 JAM2P57087 298 aa7.04□□□□□ -1.28
PTCD3-211ENST00000476215 HABP4Q5JVS0 413 aaKnown RBP7.04□□□□□ -1.28
PTCD3-211ENST00000476215 ARHGAP36Q6ZRI8 547 aa7.04□□□□□ -1.28
PTCD3-211ENST00000476215 EP400NLQ6ZTU2 488 aa7.04□□□□□ -1.28
PTCD3-211ENST00000476215 OVCH1Q7RTY7 1134 aa7.04□□□□□ -1.28
PTCD3-211ENST00000476215 THNSL2Q86YJ6 484 aa7.04□□□□□ -1.28
PTCD3-211ENST00000476215 SMARCC2Q8TAQ2 1214 aa7.04□□□□□ -1.28
PTCD3-211ENST00000476215 TMX1Q9H3N1 280 aa7.04□□□□□ -1.28
PTCD3-211ENST00000476215 SMOC1Q9H4F8 434 aa7.04□□□□□ -1.28
PTCD3-211ENST00000476215 MYOTQ9UBF9 498 aa7.04□□□□□ -1.28
PTCD3-211ENST00000476215 FAN1Q9Y2M0 1017 aa7.04□□□□□ -1.28
PTCD3-211ENST00000476215 TCRBV5S4A2TA0A5A2 114 aa7.03□□□□□ -1.28
PTCD3-211ENST00000476215 FAM83GA6ND36 823 aa7.03□□□□□ -1.28
PTCD3-211ENST00000476215 SLC27A2O14975 620 aa7.03□□□□□ -1.28
PTCD3-211ENST00000476215 TADA3O75528 432 aa7.03□□□□□ -1.28
PTCD3-211ENST00000476215 SLURP1P55000 103 aa7.03□□□□□ -1.28
PTCD3-211ENST00000476215 CTSWP56202 376 aa7.03□□□□□ -1.28
PTCD3-211ENST00000476215 PCBP1Q15365 356 aaKnown RBP eCLIP7.03□□□□□ -1.28
PTCD3-211ENST00000476215 PTRH1Q86Y79 214 aaKnown RBP7.03□□□□□ -1.28
PTCD3-211ENST00000476215 FAM126BQ8IXS8 530 aa7.03□□□□□ -1.28
PTCD3-211ENST00000476215 RBM12BQ8IXT5 1001 aaKnown RBP7.03□□□□□ -1.28
PTCD3-211ENST00000476215 C2orf69Q8N8R5 385 aa7.03□□□□□ -1.28
PTCD3-211ENST00000476215 UHMK1Q8TAS1 419 aaKnown RBP7.03□□□□□ -1.28
PTCD3-211ENST00000476215 CHAC2Q8WUX2 184 aa7.03□□□□□ -1.28
PTCD3-211ENST00000476215 MTFR1LQ9H019 292 aa7.03□□□□□ -1.28
PTCD3-211ENST00000476215 CABP5Q9NP86 173 aa7.03□□□□□ -1.28
PTCD3-211ENST00000476215 IFT57Q9NWB7 429 aa7.03□□□□□ -1.28
PTCD3-211ENST00000476215 MAPRE3Q9UPY8 281 aa7.03□□□□□ -1.28
PTCD3-211ENST00000476215 NUB1Q9Y5A7 615 aa7.03□□□□□ -1.28
PTCD3-211ENST00000476215 OTOL1A6NHN0 477 aaPredicted RBP7.02□□□□□ -1.29
PTCD3-211ENST00000476215 ZNF561-AS1K7EIQ3 104 aa7.02□□□□□ -1.29
PTCD3-211ENST00000476215 KCNK3O14649 394 aa7.02□□□□□ -1.29
PTCD3-211ENST00000476215 AMY2AP04746 511 aa7.02□□□□□ -1.29
PTCD3-211ENST00000476215 AMY2BP19961 511 aa7.02□□□□□ -1.29
PTCD3-211ENST00000476215 CNGA1P29973 690 aa7.02□□□□□ -1.29
PTCD3-211ENST00000476215 STAT3P40763 770 aa7.02□□□□□ -1.29
PTCD3-211ENST00000476215 LACTBP83111 547 aaPredicted RBP7.02□□□□□ -1.29
PTCD3-211ENST00000476215 VMACQ2NL98 169 aa7.02□□□□□ -1.29
PTCD3-211ENST00000476215 CT47A1Q5JQC4 288 aaPredicted RBP7.02□□□□□ -1.29
PTCD3-211ENST00000476215 CYP4F22Q6NT55 531 aa7.02□□□□□ -1.29
PTCD3-211ENST00000476215 PKN3Q6P5Z2 889 aa7.02□□□□□ -1.29
PTCD3-211ENST00000476215 ETV3LQ6ZN32 361 aa7.02□□□□□ -1.29
PTCD3-211ENST00000476215 UBR7Q8N806 425 aa7.02□□□□□ -1.29
PTCD3-211ENST00000476215 CXorf38Q8TB03 319 aa7.02□□□□□ -1.29
PTCD3-211ENST00000476215 PHOSPHO1Q8TCT1 267 aa7.02□□□□□ -1.29
PTCD3-211ENST00000476215 LEO1Q8WVC0 666 aaPredicted RBP7.02□□□□□ -1.29
PTCD3-211ENST00000476215 NOX5Q96PH1 765 aa7.02□□□□□ -1.29
PTCD3-211ENST00000476215 CD244Q9BZW8 370 aa7.02□□□□□ -1.29
PTCD3-211ENST00000476215 CAAP1Q9H8G2 361 aa7.02□□□□□ -1.29
PTCD3-211ENST00000476215 SMURF1Q9HCE7 757 aa7.02□□□□□ -1.29
PTCD3-211ENST00000476215 SPATA6Q9NWH7 488 aaPredicted RBP7.02□□□□□ -1.29
PTCD3-211ENST00000476215 TCRBV5S2A0A599 114 aa7.01□□□□□ -1.29
PTCD3-211ENST00000476215 CBX4O00257 560 aa7.01□□□□□ -1.29
PTCD3-211ENST00000476215 SOX5P35711 763 aa7.01□□□□□ -1.29
PTCD3-211ENST00000476215 FRMD5Q7Z6J6 570 aa7.01□□□□□ -1.29
PTCD3-211ENST00000476215 RNF180Q86T96 592 aa7.01□□□□□ -1.29
PTCD3-211ENST00000476215 CHST14Q8NCH0 376 aa7.01□□□□□ -1.29
PTCD3-211ENST00000476215 SH3RF2Q8TEC5 729 aa7.01□□□□□ -1.29
PTCD3-211ENST00000476215 ZNF526Q8TF50 670 aaPredicted RBP7.01□□□□□ -1.29
PTCD3-211ENST00000476215 PDGFDQ9GZP0 370 aaPredicted RBP7.01□□□□□ -1.29
PTCD3-211ENST00000476215 ASH2LQ9UBL3 628 aa7.01□□□□□ -1.29
PTCD3-211ENST00000476215 SRPK3Q9UPE1 567 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms