RNA–Protein interactions for RNA: ENST00000476169.1

VPS13D-207, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-207ENST00000476169 DDB1Q16531 1140 aa5.26□□□□□ -1.57
VPS13D-207ENST00000476169 RSPO4Q2I0M5 234 aaPredicted RBP5.26□□□□□ -1.57
VPS13D-207ENST00000476169 ARHGAP29Q52LW3 1261 aa5.26□□□□□ -1.57
VPS13D-207ENST00000476169 ANO1Q5XXA6 986 aa5.26□□□□□ -1.57
VPS13D-207ENST00000476169 CREB3L3Q68CJ9 461 aa5.26□□□□□ -1.57
VPS13D-207ENST00000476169 ARHGAP36Q6ZRI8 547 aa5.26□□□□□ -1.57
VPS13D-207ENST00000476169 EP400NLQ6ZTU2 488 aa5.26□□□□□ -1.57
VPS13D-207ENST00000476169 SLCO6A1Q86UG4 719 aa5.26□□□□□ -1.57
VPS13D-207ENST00000476169 PNMA8AQ86V59 439 aaPredicted RBP5.26□□□□□ -1.57
VPS13D-207ENST00000476169 PTRH1Q86Y79 214 aaKnown RBP5.26□□□□□ -1.57
VPS13D-207ENST00000476169 SPICE1Q8N0Z3 855 aa5.26□□□□□ -1.57
VPS13D-207ENST00000476169 Q8N1Y9 231 aa5.26□□□□□ -1.57
VPS13D-207ENST00000476169 EFHBQ8N7U6 833 aa5.26□□□□□ -1.57
VPS13D-207ENST00000476169 VPS37AQ8NEZ2 397 aa5.26□□□□□ -1.57
VPS13D-207ENST00000476169 USP33Q8TEY7 942 aa5.26□□□□□ -1.57
VPS13D-207ENST00000476169 SLC5A5Q92911 643 aa5.26□□□□□ -1.57
VPS13D-207ENST00000476169 CLIP3Q96DZ5 547 aa5.26□□□□□ -1.57
VPS13D-207ENST00000476169 G6PC3Q9BUM1 346 aa5.26□□□□□ -1.57
VPS13D-207ENST00000476169 MENTQ9BUN1 341 aa5.26□□□□□ -1.57
VPS13D-207ENST00000476169 EPB41L1Q9H4G0 881 aa5.26□□□□□ -1.57
VPS13D-207ENST00000476169 SMURF1Q9HCE7 757 aa5.26□□□□□ -1.57
VPS13D-207ENST00000476169 PTPRHQ9HD43 1115 aa5.26□□□□□ -1.57
VPS13D-207ENST00000476169 SLAMF8Q9P0V8 285 aa5.26□□□□□ -1.57
VPS13D-207ENST00000476169 PUF60Q9UHX1 559 aaKnown RBP5.26□□□□□ -1.57
VPS13D-207ENST00000476169 RWDD3Q9Y3V2 267 aa5.26□□□□□ -1.57
VPS13D-207ENST00000476169 LAS1LQ9Y4W2 734 aaKnown RBP5.26□□□□□ -1.57
VPS13D-207ENST00000476169 X6R8D5 127 aa5.26□□□□□ -1.57
VPS13D-207ENST00000476169 A0A1W2PQ27 194 aa5.25□□□□□ -1.57
VPS13D-207ENST00000476169 A0A1W2PQ64 194 aa5.25□□□□□ -1.57
VPS13D-207ENST00000476169 A0A1W2PQC6 194 aa5.25□□□□□ -1.57
VPS13D-207ENST00000476169 A0A1W2PQD8 194 aa5.25□□□□□ -1.57
VPS13D-207ENST00000476169 RASSF10A6NK89 507 aa5.25□□□□□ -1.57
VPS13D-207ENST00000476169 KCNK3O14649 394 aa5.25□□□□□ -1.57
VPS13D-207ENST00000476169 DYRK3O43781 588 aa5.25□□□□□ -1.57
VPS13D-207ENST00000476169 PPP1R11O60927 126 aaPredicted RBP5.25□□□□□ -1.57
VPS13D-207ENST00000476169 USP2O75604 605 aaPredicted RBP5.25□□□□□ -1.57
VPS13D-207ENST00000476169 TGFB1P01137 390 aa5.25□□□□□ -1.57
VPS13D-207ENST00000476169 AMY2AP04746 511 aa5.25□□□□□ -1.57
VPS13D-207ENST00000476169 TRIM27P14373 513 aa5.25□□□□□ -1.57
VPS13D-207ENST00000476169 YBX3P16989 372 aaKnown RBP eCLIP5.25□□□□□ -1.57
VPS13D-207ENST00000476169 AMY2BP19961 511 aa5.25□□□□□ -1.57
VPS13D-207ENST00000476169 CD96P40200 585 aa5.25□□□□□ -1.57
VPS13D-207ENST00000476169 IARSP41252 1262 aaKnown RBP5.25□□□□□ -1.57
VPS13D-207ENST00000476169 KIR2DL1P43626 348 aaPredicted RBP5.25□□□□□ -1.57
VPS13D-207ENST00000476169 KIR2DL2P43627 348 aaPredicted RBP5.25□□□□□ -1.57
VPS13D-207ENST00000476169 RTP1P59025 263 aa5.25□□□□□ -1.57
VPS13D-207ENST00000476169 IRF9Q00978 393 aa5.25□□□□□ -1.57
VPS13D-207ENST00000476169 FOXD4Q12950 439 aaPredicted RBP5.25□□□□□ -1.57
VPS13D-207ENST00000476169 RGL3Q3MIN7 710 aa5.25□□□□□ -1.57
VPS13D-207ENST00000476169 COBLL1Q53SF7 1204 aa5.25□□□□□ -1.57
VPS13D-207ENST00000476169 NKAPLQ5M9Q1 402 aa5.25□□□□□ -1.57
VPS13D-207ENST00000476169 CEP128Q6ZU80 1094 aa5.25□□□□□ -1.57
VPS13D-207ENST00000476169 OTOP3Q7RTS5 596 aa5.25□□□□□ -1.57
VPS13D-207ENST00000476169 STK11IPQ8N1F8 1099 aa5.25□□□□□ -1.57
VPS13D-207ENST00000476169 TMEM151AQ8N4L1 468 aa5.25□□□□□ -1.57
VPS13D-207ENST00000476169 LZTR1Q8N653 840 aa5.25□□□□□ -1.57
VPS13D-207ENST00000476169 CLRN3Q8NCR9 226 aa5.25□□□□□ -1.57
VPS13D-207ENST00000476169 PJA1Q8NG27 643 aa5.25□□□□□ -1.57
VPS13D-207ENST00000476169 PIP4K2CQ8TBX8 421 aa5.25□□□□□ -1.57
VPS13D-207ENST00000476169 PLEKHO2Q8TD55 490 aa5.25□□□□□ -1.57
VPS13D-207ENST00000476169 LINC01599Q8WXQ3 324 aa5.25□□□□□ -1.57
VPS13D-207ENST00000476169 AHCYL2Q96HN2 611 aaKnown RBP5.25□□□□□ -1.57
VPS13D-207ENST00000476169 VTA1Q9NP79 307 aa5.25□□□□□ -1.57
VPS13D-207ENST00000476169 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.25□□□□□ -1.57
VPS13D-207ENST00000476169 LMCD1Q9NZU5 365 aa5.25□□□□□ -1.57
VPS13D-207ENST00000476169 K7ESF4 209 aa5.24□□□□□ -1.57
VPS13D-207ENST00000476169 TBX3O15119 743 aa5.24□□□□□ -1.57
VPS13D-207ENST00000476169 NKRFO15226 690 aaKnown RBP eCLIP5.24□□□□□ -1.57
VPS13D-207ENST00000476169 TGM5O43548 720 aa5.24□□□□□ -1.57
VPS13D-207ENST00000476169 HIP1RO75146 1068 aa5.24□□□□□ -1.57
VPS13D-207ENST00000476169 ZGLP1P0C6A0 271 aa5.24□□□□□ -1.57
VPS13D-207ENST00000476169 SLC9A1P19634 815 aa5.24□□□□□ -1.57
VPS13D-207ENST00000476169 PPM1FP49593 454 aaPredicted RBP5.24□□□□□ -1.57
VPS13D-207ENST00000476169 GSK3AP49840 483 aa5.24□□□□□ -1.57
VPS13D-207ENST00000476169 CORO7P57737 925 aa5.24□□□□□ -1.57
VPS13D-207ENST00000476169 ZP2Q05996 745 aa5.24□□□□□ -1.57
VPS13D-207ENST00000476169 BNIP3Q12983 259 aa5.24□□□□□ -1.57
VPS13D-207ENST00000476169 SLC14A2Q15849 920 aa5.24□□□□□ -1.57
VPS13D-207ENST00000476169 HSF5Q4G112 596 aaPredicted RBP5.24□□□□□ -1.57
VPS13D-207ENST00000476169 INO80DQ53TQ3 878 aaPredicted RBP5.24□□□□□ -1.57
VPS13D-207ENST00000476169 HABP4Q5JVS0 413 aaKnown RBP5.24□□□□□ -1.57
VPS13D-207ENST00000476169 MROH9Q5TGP6 573 aa5.24□□□□□ -1.57
VPS13D-207ENST00000476169 ANGEL2Q5VTE6 544 aaKnown RBP5.24□□□□□ -1.57
VPS13D-207ENST00000476169 BROXQ5VW32 411 aa5.24□□□□□ -1.57
VPS13D-207ENST00000476169 HHIPL2Q6UWX4 724 aa5.24□□□□□ -1.57
VPS13D-207ENST00000476169 MORC1Q86VD1 984 aa5.24□□□□□ -1.57
VPS13D-207ENST00000476169 KIAA1958Q8N8K9 716 aa5.24□□□□□ -1.57
VPS13D-207ENST00000476169 MYRIPQ8NFW9 859 aa5.24□□□□□ -1.57
VPS13D-207ENST00000476169 NLGN2Q8NFZ4 835 aa5.24□□□□□ -1.57
VPS13D-207ENST00000476169 FBXO41Q8TF61 875 aa5.24□□□□□ -1.57
VPS13D-207ENST00000476169 FUBP3Q96I24 572 aaKnown RBP eCLIP5.24□□□□□ -1.57
VPS13D-207ENST00000476169 ALPK1Q96QP1 1244 aa5.24□□□□□ -1.57
VPS13D-207ENST00000476169 MTA3Q9BTC8 594 aa5.24□□□□□ -1.57
VPS13D-207ENST00000476169 SARGQ9BW04 601 aa5.24□□□□□ -1.57
VPS13D-207ENST00000476169 ADAMTS10Q9H324 1103 aa5.24□□□□□ -1.57
VPS13D-207ENST00000476169 PCIF1Q9H4Z3 704 aa5.24□□□□□ -1.57
VPS13D-207ENST00000476169 IMPACTQ9P2X3 320 aa5.24□□□□□ -1.57
VPS13D-207ENST00000476169 EBF1Q9UH73 591 aa5.24□□□□□ -1.57
VPS13D-207ENST00000476169 ZBTB21Q9ULJ3 1066 aa5.24□□□□□ -1.57
VPS13D-207ENST00000476169 ANKRD6Q9Y2G4 727 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms