RNA–Protein interactions for RNA: ENST00000476061.5

PTPN7-208, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 4

Gene PTPN7, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-208ENST00000476061 TGS1Q96RS0 853 aaKnown RBP11.37□□□□□ -0.59
PTPN7-208ENST00000476061 EHMT1Q9H9B1 1298 aa11.37□□□□□ -0.59
PTPN7-208ENST00000476061 JADE2Q9NQC1 790 aa11.37□□□□□ -0.59
PTPN7-208ENST00000476061 SETD4Q9NVD3 440 aa11.37□□□□□ -0.59
PTPN7-208ENST00000476061 ERAP1Q9NZ08 941 aa11.37□□□□□ -0.59
PTPN7-208ENST00000476061 PCDHA6Q9UN73 950 aa11.37□□□□□ -0.59
PTPN7-208ENST00000476061 PCDHA8Q9Y5H6 950 aa11.37□□□□□ -0.59
PTPN7-208ENST00000476061 CNTNAP5Q8WYK1 1306 aa11.36□□□□□ -0.59
PTPN7-208ENST00000476061 TCF20Q9UGU0 1960 aaKnown RBP11.36□□□□□ -0.59
PTPN7-208ENST00000476061 GSTTP1A0A1W2PQM5 241 aa11.36□□□□□ -0.59
PTPN7-208ENST00000476061 LINC01553A4QN01 128 aa11.36□□□□□ -0.59
PTPN7-208ENST00000476061 FOSP01100 380 aaPredicted RBP11.36□□□□□ -0.59
PTPN7-208ENST00000476061 HMGB1P09429 215 aaKnown RBP11.36□□□□□ -0.59
PTPN7-208ENST00000476061 BMP1P13497 986 aa11.36□□□□□ -0.59
PTPN7-208ENST00000476061 UTP14CQ5TAP6 766 aaKnown RBP11.36□□□□□ -0.59
PTPN7-208ENST00000476061 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.36□□□□□ -0.59
PTPN7-208ENST00000476061 TMCO2Q7Z6W1 182 aaPredicted RBP11.36□□□□□ -0.59
PTPN7-208ENST00000476061 MICU3Q86XE3 530 aa11.36□□□□□ -0.59
PTPN7-208ENST00000476061 TRIM50Q86XT4 487 aa11.36□□□□□ -0.59
PTPN7-208ENST00000476061 IL27Q8NEV9 243 aa11.36□□□□□ -0.59
PTPN7-208ENST00000476061 ADAMTS19Q8TE59 1207 aa11.36□□□□□ -0.59
PTPN7-208ENST00000476061 LMBR1Q8WVP7 490 aa11.36□□□□□ -0.59
PTPN7-208ENST00000476061 TNPO1Q92973 898 aaKnown RBP11.36□□□□□ -0.59
PTPN7-208ENST00000476061 TOP1MTQ969P6 601 aa11.36□□□□□ -0.59
PTPN7-208ENST00000476061 SAMD11Q96NU1 681 aa11.36□□□□□ -0.59
PTPN7-208ENST00000476061 LRRC2Q9BYS8 371 aa11.36□□□□□ -0.59
PTPN7-208ENST00000476061 GLT8D2Q9H1C3 349 aa11.36□□□□□ -0.59
PTPN7-208ENST00000476061 SMARCAD1Q9H4L7 1026 aa11.36□□□□□ -0.59
PTPN7-208ENST00000476061 SUGCTQ9HAC7 445 aa11.36□□□□□ -0.59
PTPN7-208ENST00000476061 LOXHD1Q8IVV2 1947 aa11.35□□□□□ -0.59
PTPN7-208ENST00000476061 PRRC2BQ5JSZ5 2229 aaKnown RBP11.35□□□□□ -0.59
PTPN7-208ENST00000476061 MBLAC1A4D2B0 266 aaPredicted RBP11.35□□□□□ -0.59
PTPN7-208ENST00000476061 ZBTB43O43298 467 aa11.35□□□□□ -0.59
PTPN7-208ENST00000476061 CDC45O75419 566 aa11.35□□□□□ -0.59
PTPN7-208ENST00000476061 ARHGAP4P98171 946 aa11.35□□□□□ -0.59
PTPN7-208ENST00000476061 FUT2Q10981 343 aa11.35□□□□□ -0.59
PTPN7-208ENST00000476061 UBE2SQ16763 222 aa11.35□□□□□ -0.59
PTPN7-208ENST00000476061 HEATR3Q7Z4Q2 680 aa11.35□□□□□ -0.59
PTPN7-208ENST00000476061 MICALL1Q8N3F8 863 aa11.35□□□□□ -0.59
PTPN7-208ENST00000476061 CCDC82Q8N4S0 544 aa11.35□□□□□ -0.59
PTPN7-208ENST00000476061 MXRA8Q9BRK3 442 aa11.35□□□□□ -0.59
PTPN7-208ENST00000476061 RIC8AQ9NPQ8 531 aa11.35□□□□□ -0.59
PTPN7-208ENST00000476061 TELO2Q9Y4R8 837 aa11.35□□□□□ -0.59
PTPN7-208ENST00000476061 NFASCO94856 1347 aa11.35□□□□□ -0.59
PTPN7-208ENST00000476061 hCG_1642624A0A1W2PR95 340 aa11.34□□□□□ -0.59
PTPN7-208ENST00000476061 RRN3P2A6NIE6 340 aa11.34□□□□□ -0.59
PTPN7-208ENST00000476061 NAPAP54920 295 aa11.34□□□□□ -0.59
PTPN7-208ENST00000476061 SP4Q02446 784 aa11.34□□□□□ -0.59
PTPN7-208ENST00000476061 AP3B2Q13367 1082 aa11.34□□□□□ -0.59
PTPN7-208ENST00000476061 SKIV2LQ15477 1246 aaKnown RBP11.34□□□□□ -0.59
PTPN7-208ENST00000476061 RTN1Q16799 776 aa11.34□□□□□ -0.59
PTPN7-208ENST00000476061 WWC2Q6AWC2 1192 aa11.34□□□□□ -0.59
PTPN7-208ENST00000476061 FAM43BQ6ZT52 329 aaPredicted RBP11.34□□□□□ -0.59
PTPN7-208ENST00000476061 SPRED2Q7Z698 418 aa11.34□□□□□ -0.59
PTPN7-208ENST00000476061 RSPH3Q86UC2 560 aa11.34□□□□□ -0.59
PTPN7-208ENST00000476061 RAB11FIP4Q86YS3 637 aa11.34□□□□□ -0.59
PTPN7-208ENST00000476061 RASEFQ8IZ41 740 aa11.34□□□□□ -0.59
PTPN7-208ENST00000476061 MYOCDQ8IZQ8 938 aa11.34□□□□□ -0.59
PTPN7-208ENST00000476061 KCNB2Q92953 911 aa11.34□□□□□ -0.59
PTPN7-208ENST00000476061 HLA-CQ95604 372 aa11.34□□□□□ -0.59
PTPN7-208ENST00000476061 UHRF1Q96T88 793 aaPredicted RBP11.34□□□□□ -0.59
PTPN7-208ENST00000476061 IFIH1Q9BYX4 1025 aaKnown RBP11.34□□□□□ -0.59
PTPN7-208ENST00000476061 JPH1Q9HDC5 661 aaPredicted RBP11.34□□□□□ -0.59
PTPN7-208ENST00000476061 KCNH7Q9NS40 1196 aa11.34□□□□□ -0.59
PTPN7-208ENST00000476061 BRPF3Q9ULD4 1205 aa11.34□□□□□ -0.59
PTPN7-208ENST00000476061 SQORQ9Y6N5 450 aa11.34□□□□□ -0.59
PTPN7-208ENST00000476061 CHD9Q3L8U1 2897 aa11.34□□□□□ -0.59
PTPN7-208ENST00000476061 WDR81Q562E7 1941 aa11.33□□□□□ -0.6
PTPN7-208ENST00000476061 CCDC196A0A1B0GTZ2 297 aa11.33□□□□□ -0.6
PTPN7-208ENST00000476061 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.33□□□□□ -0.6
PTPN7-208ENST00000476061 ATG7O95352 703 aa11.33□□□□□ -0.6
PTPN7-208ENST00000476061 CHRNA1P02708 482 aa11.33□□□□□ -0.6
PTPN7-208ENST00000476061 CTSHP09668 335 aa11.33□□□□□ -0.6
PTPN7-208ENST00000476061 CLK2P49760 499 aaKnown RBP11.33□□□□□ -0.6
PTPN7-208ENST00000476061 MGAT3Q09327 533 aa11.33□□□□□ -0.6
PTPN7-208ENST00000476061 PPFIA1Q13136 1202 aa11.33□□□□□ -0.6
PTPN7-208ENST00000476061 GRIK4Q16099 956 aa11.33□□□□□ -0.6
PTPN7-208ENST00000476061 ADCK5Q3MIX3 580 aa11.33□□□□□ -0.6
PTPN7-208ENST00000476061 MARCH8Q5T0T0 291 aa11.33□□□□□ -0.6
PTPN7-208ENST00000476061 KRT40Q6A162 431 aa11.33□□□□□ -0.6
PTPN7-208ENST00000476061 MCTP2Q6DN12 878 aa11.33□□□□□ -0.6
PTPN7-208ENST00000476061 TYW1BQ6NUM6 668 aa11.33□□□□□ -0.6
PTPN7-208ENST00000476061 NIPA1Q7RTP0 329 aa11.33□□□□□ -0.6
PTPN7-208ENST00000476061 PLPPR4Q7Z2D5 763 aa11.33□□□□□ -0.6
PTPN7-208ENST00000476061 FBXL16Q8N461 479 aa11.33□□□□□ -0.6
PTPN7-208ENST00000476061 GLG1Q92896 1179 aa11.33□□□□□ -0.6
PTPN7-208ENST00000476061 SDF4Q9BRK5 362 aa11.33□□□□□ -0.6
PTPN7-208ENST00000476061 OSBPL7Q9BZF2 842 aa11.33□□□□□ -0.6
PTPN7-208ENST00000476061 BARHL2Q9NY43 387 aa11.33□□□□□ -0.6
PTPN7-208ENST00000476061 SLC9A2Q9UBY0 812 aa11.33□□□□□ -0.6
PTPN7-208ENST00000476061 TUBE1Q9UJT0 475 aa11.33□□□□□ -0.6
PTPN7-208ENST00000476061 V9GY48 417 aaPredicted RBP11.33□□□□□ -0.6
PTPN7-208ENST00000476061 PRUNE2Q8WUY3 3088 aa11.33□□□□□ -0.6
PTPN7-208ENST00000476061 MYH9P35579 1960 aaKnown RBP11.32□□□□□ -0.6
PTPN7-208ENST00000476061 NID2Q14112 1375 aa11.32□□□□□ -0.6
PTPN7-208ENST00000476061 KLF18A0A0U1RQI7 1052 aa11.32□□□□□ -0.6
PTPN7-208ENST00000476061 ESYT2A0FGR8 921 aa11.32□□□□□ -0.6
PTPN7-208ENST00000476061 SMCO2A6NFE2 343 aa11.32□□□□□ -0.6
PTPN7-208ENST00000476061 GOLGA8AA7E2F4 631 aa11.32□□□□□ -0.6
PTPN7-208ENST00000476061 GOLGA8BA8MQT2 603 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 159 ms