RNA–Protein interactions for RNA: ENST00000475944.1

CDRT1-205, CMT1A duplicated region transcript 1, humanhuman

TSL 3

Gene CDRT1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-205ENST00000475944 TAF2Q6P1X5 1199 aa12.47□□□□□ -0.41
CDRT1-205ENST00000475944 CASC1Q6TDU7 716 aa12.47□□□□□ -0.41
CDRT1-205ENST00000475944 FAM178BQ8IXR5 827 aa12.47□□□□□ -0.41
CDRT1-205ENST00000475944 MB21D2Q8IYB1 491 aaPredicted RBP12.47□□□□□ -0.41
CDRT1-205ENST00000475944 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.47□□□□□ -0.41
CDRT1-205ENST00000475944 LMBR1Q8WVP7 490 aa12.47□□□□□ -0.41
CDRT1-205ENST00000475944 CDHR1Q96JP9 859 aa12.47□□□□□ -0.41
CDRT1-205ENST00000475944 MTA3Q9BTC8 594 aa12.47□□□□□ -0.41
CDRT1-205ENST00000475944 BAZ2BQ9UIF8 2168 aaKnown RBP12.47□□□□□ -0.41
CDRT1-205ENST00000475944 PI4K2BG5E9Z4 385 aa12.46□□□□□ -0.41
CDRT1-205ENST00000475944 RBAK-RBAKDNI3L0D1 243 aa12.46□□□□□ -0.41
CDRT1-205ENST00000475944 TCF7P36402 384 aaPredicted RBP12.46□□□□□ -0.41
CDRT1-205ENST00000475944 PTCRAQ6ISU1 281 aaPredicted RBP12.46□□□□□ -0.41
CDRT1-205ENST00000475944 RPAINQ86UA6 219 aa12.46□□□□□ -0.41
CDRT1-205ENST00000475944 RSPH3Q86UC2 560 aa12.46□□□□□ -0.41
CDRT1-205ENST00000475944 TMEM192Q8IY95 271 aa12.46□□□□□ -0.41
CDRT1-205ENST00000475944 TMTC2Q8N394 836 aa12.46□□□□□ -0.41
CDRT1-205ENST00000475944 BANK1Q8NDB2 785 aa12.46□□□□□ -0.41
CDRT1-205ENST00000475944 MAP4K1Q92918 833 aa12.46□□□□□ -0.41
CDRT1-205ENST00000475944 KHSRPQ92945 711 aaKnown RBP eCLIP12.46□□□□□ -0.41
CDRT1-205ENST00000475944 GPRASP2Q96D09 838 aa12.46□□□□□ -0.41
CDRT1-205ENST00000475944 MYL10Q9BUA6 226 aa12.46□□□□□ -0.41
CDRT1-205ENST00000475944 OSBPL7Q9BZF2 842 aa12.46□□□□□ -0.41
CDRT1-205ENST00000475944 LY9Q9HBG7 655 aa12.46□□□□□ -0.41
CDRT1-205ENST00000475944 RBM8AQ9Y5S9 174 aaKnown RBP12.46□□□□□ -0.41
CDRT1-205ENST00000475944 DOCK5Q9H7D0 1870 aa12.46□□□□□ -0.42
CDRT1-205ENST00000475944 RALGAPA2Q2PPJ7 1873 aa12.45□□□□□ -0.42
CDRT1-205ENST00000475944 CCDC69A6NI79 296 aa12.45□□□□□ -0.42
CDRT1-205ENST00000475944 SSTR3P32745 418 aaPredicted RBP12.45□□□□□ -0.42
CDRT1-205ENST00000475944 PPFIA1Q13136 1202 aa12.45□□□□□ -0.42
CDRT1-205ENST00000475944 NFXL1Q6ZNB6 911 aa12.45□□□□□ -0.42
CDRT1-205ENST00000475944 GJD3Q8N144 294 aa12.45□□□□□ -0.42
CDRT1-205ENST00000475944 FIBCD1Q8N539 461 aa12.45□□□□□ -0.42
CDRT1-205ENST00000475944 SEPT1Q8WYJ6 367 aa12.45□□□□□ -0.42
CDRT1-205ENST00000475944 PABPC5Q96DU9 382 aaKnown RBP12.45□□□□□ -0.42
CDRT1-205ENST00000475944 IL17RAQ96F46 866 aa12.45□□□□□ -0.42
CDRT1-205ENST00000475944 TMEM87BQ96K49 555 aa12.45□□□□□ -0.42
CDRT1-205ENST00000475944 NSUN3Q9H649 340 aaKnown RBP12.45□□□□□ -0.42
CDRT1-205ENST00000475944 PSTPIP2Q9H939 334 aa12.45□□□□□ -0.42
CDRT1-205ENST00000475944 CD320Q9NPF0 282 aa12.45□□□□□ -0.42
CDRT1-205ENST00000475944 ERAP1Q9NZ08 941 aa12.45□□□□□ -0.42
CDRT1-205ENST00000475944 FAM50BQ9Y247 325 aa12.45□□□□□ -0.42
CDRT1-205ENST00000475944 RWDD3Q9Y3V2 267 aa12.45□□□□□ -0.42
CDRT1-205ENST00000475944 TELO2Q9Y4R8 837 aa12.45□□□□□ -0.42
CDRT1-205ENST00000475944 NLRC5Q86WI3 1866 aa12.44□□□□□ -0.42
CDRT1-205ENST00000475944 GRXCR2A6NFK2 248 aa12.44□□□□□ -0.42
CDRT1-205ENST00000475944 SPDYE3A6NKU9 549 aa12.44□□□□□ -0.42
CDRT1-205ENST00000475944 PRC1O43663 620 aa12.44□□□□□ -0.42
CDRT1-205ENST00000475944 PLEKHA8P1O95397 391 aa12.44□□□□□ -0.42
CDRT1-205ENST00000475944 CHRNA1P02708 482 aa12.44□□□□□ -0.42
CDRT1-205ENST00000475944 RPLP2P05387 115 aaKnown RBP12.44□□□□□ -0.42
CDRT1-205ENST00000475944 RB1P06400 928 aa12.44□□□□□ -0.42
CDRT1-205ENST00000475944 CALM1P0DP23 149 aa12.44□□□□□ -0.42
CDRT1-205ENST00000475944 CALM2P0DP24 149 aa12.44□□□□□ -0.42
CDRT1-205ENST00000475944 CALM3P0DP25 149 aa12.44□□□□□ -0.42
CDRT1-205ENST00000475944 GHRP10912 638 aa12.44□□□□□ -0.42
CDRT1-205ENST00000475944 IL9P15248 144 aa12.44□□□□□ -0.42
CDRT1-205ENST00000475944 KCNA2P16389 499 aa12.44□□□□□ -0.42
CDRT1-205ENST00000475944 MCM5P33992 734 aa12.44□□□□□ -0.42
CDRT1-205ENST00000475944 CTNNB1P35222 781 aa12.44□□□□□ -0.42
CDRT1-205ENST00000475944 MTMR1Q13613 665 aa12.44□□□□□ -0.42
CDRT1-205ENST00000475944 TCEAL5Q5H9L2 206 aa12.44□□□□□ -0.42
CDRT1-205ENST00000475944 SRBD1Q8N5C6 995 aaKnown RBP12.44□□□□□ -0.42
CDRT1-205ENST00000475944 NEK9Q8TD19 979 aa12.44□□□□□ -0.42
CDRT1-205ENST00000475944 GLG1Q92896 1179 aa12.44□□□□□ -0.42
CDRT1-205ENST00000475944 LMAN2LQ9H0V9 348 aa12.44□□□□□ -0.42
CDRT1-205ENST00000475944 C11orf16Q9NQ32 467 aa12.44□□□□□ -0.42
CDRT1-205ENST00000475944 TUBE1Q9UJT0 475 aa12.44□□□□□ -0.42
CDRT1-205ENST00000475944 ADGRA3Q8IWK6 1321 aa12.43□□□□□ -0.42
CDRT1-205ENST00000475944 FAM86C2PA6NEL3 165 aa12.43□□□□□ -0.42
CDRT1-205ENST00000475944 C5orf67F2Z3F1 127 aa12.43□□□□□ -0.42
CDRT1-205ENST00000475944 H3BQ06 376 aaPredicted RBP12.43□□□□□ -0.42
CDRT1-205ENST00000475944 SH2B2O14492 632 aaPredicted RBP12.43□□□□□ -0.42
CDRT1-205ENST00000475944 MAFGO15525 162 aa12.43□□□□□ -0.42
CDRT1-205ENST00000475944 NCK2O43639 380 aa12.43□□□□□ -0.42
CDRT1-205ENST00000475944 ATP9AO75110 1047 aa12.43□□□□□ -0.42
CDRT1-205ENST00000475944 MARK3P27448 753 aa12.43□□□□□ -0.42
CDRT1-205ENST00000475944 MGAT3Q09327 533 aa12.43□□□□□ -0.42
CDRT1-205ENST00000475944 LPIN1Q14693 890 aa12.43□□□□□ -0.42
CDRT1-205ENST00000475944 GRIK4Q16099 956 aa12.43□□□□□ -0.42
CDRT1-205ENST00000475944 RUFY4Q6ZNE9 571 aa12.43□□□□□ -0.42
CDRT1-205ENST00000475944 EP400NLQ6ZTU2 488 aa12.43□□□□□ -0.42
CDRT1-205ENST00000475944 C11orf84Q9BUA3 381 aaPredicted RBP12.43□□□□□ -0.42
CDRT1-205ENST00000475944 SMARCAD1Q9H4L7 1026 aa12.43□□□□□ -0.42
CDRT1-205ENST00000475944 EHMT1Q9H9B1 1298 aa12.43□□□□□ -0.42
CDRT1-205ENST00000475944 SUPT16HQ9Y5B9 1047 aaKnown RBP12.43□□□□□ -0.42
CDRT1-205ENST00000475944 UBIAD1Q9Y5Z9 338 aa12.43□□□□□ -0.42
CDRT1-205ENST00000475944 GSTTP1A0A1W2PQM5 241 aa12.42□□□□□ -0.42
CDRT1-205ENST00000475944 MBLAC1A4D2B0 266 aaPredicted RBP12.42□□□□□ -0.42
CDRT1-205ENST00000475944 RRN3P2A6NIE6 340 aa12.42□□□□□ -0.42
CDRT1-205ENST00000475944 PRR33A8MZF0 331 aa12.42□□□□□ -0.42
CDRT1-205ENST00000475944 ALADP13716 330 aa12.42□□□□□ -0.42
CDRT1-205ENST00000475944 ITGB5P18084 799 aa12.42□□□□□ -0.42
CDRT1-205ENST00000475944 RXRAP19793 462 aa12.42□□□□□ -0.42
CDRT1-205ENST00000475944 BMPR1AP36894 532 aa12.42□□□□□ -0.42
CDRT1-205ENST00000475944 LIFRP42702 1097 aa12.42□□□□□ -0.42
CDRT1-205ENST00000475944 COL19A1Q14993 1142 aa12.42□□□□□ -0.42
CDRT1-205ENST00000475944 FBXO47Q5MNV8 452 aa12.42□□□□□ -0.42
CDRT1-205ENST00000475944 TSHZ1Q6ZSZ6 1077 aa12.42□□□□□ -0.42
CDRT1-205ENST00000475944 CMTR1Q8N1G2 835 aaKnown RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms