RNA–Protein interactions for RNA: ENST00000475875.1

CSNK2B-207, Transcript of casein kinase 2 beta, humanhuman

TSL 1 (best)

Gene CSNK2B, Length 590 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2B-207ENST00000475875 TGFB3P10600 412 aa16.95■□□□□ 0.3
CSNK2B-207ENST00000475875 UBE3AQ05086 875 aa16.95■□□□□ 0.3
CSNK2B-207ENST00000475875 USH1GQ495M9 461 aa16.95■□□□□ 0.3
CSNK2B-207ENST00000475875 TMEM184AQ6ZMB5 413 aa16.95■□□□□ 0.3
CSNK2B-207ENST00000475875 RBM23Q86U06 439 aaKnown RBP16.95■□□□□ 0.3
CSNK2B-207ENST00000475875 KLHL23Q8NBE8 558 aa16.95■□□□□ 0.3
CSNK2B-207ENST00000475875 EHMT1Q9H9B1 1298 aa16.95■□□□□ 0.3
CSNK2B-207ENST00000475875 TCP11L1Q9NUJ3 509 aa16.95■□□□□ 0.3
CSNK2B-207ENST00000475875 ANAPC4Q9UJX5 808 aa16.95■□□□□ 0.3
CSNK2B-207ENST00000475875 MRPL42Q9Y6G3 142 aaKnown RBP16.95■□□□□ 0.3
CSNK2B-207ENST00000475875 TTC3P53804 2025 aa16.94■□□□□ 0.3
CSNK2B-207ENST00000475875 FGRP09769 529 aa16.94■□□□□ 0.3
CSNK2B-207ENST00000475875 GPATCH4Q5T3I0 446 aaKnown RBP16.94■□□□□ 0.3
CSNK2B-207ENST00000475875 SIRT2Q8IXJ6 389 aa16.94■□□□□ 0.3
CSNK2B-207ENST00000475875 PCDHGC5Q9Y5F6 944 aa16.94■□□□□ 0.3
CSNK2B-207ENST00000475875 GGPS1O95749 300 aa16.93■□□□□ 0.3
CSNK2B-207ENST00000475875 EIF2AK2P19525 551 aaKnown RBP16.93■□□□□ 0.3
CSNK2B-207ENST00000475875 PDE12Q6L8Q7 609 aaKnown RBP16.93■□□□□ 0.3
CSNK2B-207ENST00000475875 TBC1D5Q92609 795 aa16.93■□□□□ 0.3
CSNK2B-207ENST00000475875 LRRCC1Q9C099 1032 aa16.93■□□□□ 0.3
CSNK2B-207ENST00000475875 S1PR5Q9H228 398 aa16.93■□□□□ 0.3
CSNK2B-207ENST00000475875 PXMP2Q9NR77 195 aa16.93■□□□□ 0.3
CSNK2B-207ENST00000475875 CCDC171Q6TFL3 1326 aa16.93■□□□□ 0.3
CSNK2B-207ENST00000475875 BRD1O95696 1058 aa16.92■□□□□ 0.3
CSNK2B-207ENST00000475875 LGALS2P05162 132 aa16.92■□□□□ 0.3
CSNK2B-207ENST00000475875 HSPD1P10809 573 aaKnown RBP16.92■□□□□ 0.3
CSNK2B-207ENST00000475875 GHRP10912 638 aa16.92■□□□□ 0.3
CSNK2B-207ENST00000475875 HOXB8P17481 243 aaPredicted RBP16.92■□□□□ 0.3
CSNK2B-207ENST00000475875 ADAM17P78536 824 aa16.92■□□□□ 0.3
CSNK2B-207ENST00000475875 DUSP6Q16828 381 aa16.92■□□□□ 0.3
CSNK2B-207ENST00000475875 CRIPAKQ8N1N5 446 aa16.92■□□□□ 0.3
CSNK2B-207ENST00000475875 RASGRP4Q8TDF6 673 aa16.92■□□□□ 0.3
CSNK2B-207ENST00000475875 GPATCH3Q96I76 525 aa16.92■□□□□ 0.3
CSNK2B-207ENST00000475875 TTC14Q96N46 770 aa16.92■□□□□ 0.3
CSNK2B-207ENST00000475875 USP26Q9BXU7 913 aa16.92■□□□□ 0.3
CSNK2B-207ENST00000475875 MRPL11Q9Y3B7 192 aaKnown RBP16.92■□□□□ 0.3
CSNK2B-207ENST00000475875 CEP250Q9BV73 2442 aa16.92■□□□□ 0.3
CSNK2B-207ENST00000475875 CHRNA1P02708 482 aa16.91■□□□□ 0.3
CSNK2B-207ENST00000475875 UBA1P22314 1058 aaKnown RBP16.91■□□□□ 0.3
CSNK2B-207ENST00000475875 CTDSPL2Q05D32 466 aa16.91■□□□□ 0.3
CSNK2B-207ENST00000475875 TAF2Q6P1X5 1199 aa16.91■□□□□ 0.3
CSNK2B-207ENST00000475875 NPAS4Q8IUM7 802 aa16.91■□□□□ 0.3
CSNK2B-207ENST00000475875 VN1R2Q8NFZ6 395 aa16.91■□□□□ 0.3
CSNK2B-207ENST00000475875 CNTNAP3BQ96NU0 1288 aa16.91■□□□□ 0.3
CSNK2B-207ENST00000475875 CNTNAP3Q9BZ76 1288 aa16.91■□□□□ 0.3
CSNK2B-207ENST00000475875 MFSD1Q9H3U5 465 aa16.91■□□□□ 0.3
CSNK2B-207ENST00000475875 MLXIPQ9HAP2 919 aa16.91■□□□□ 0.3
CSNK2B-207ENST00000475875 LMNAP02545 664 aaKnown RBP16.9■□□□□ 0.3
CSNK2B-207ENST00000475875 STAG3L1P0CL83 205 aa16.9■□□□□ 0.3
CSNK2B-207ENST00000475875 GHRHRQ02643 423 aa16.9■□□□□ 0.3
CSNK2B-207ENST00000475875 KCNC3Q14003 757 aa16.9■□□□□ 0.3
CSNK2B-207ENST00000475875 LPIN1Q14693 890 aa16.9■□□□□ 0.3
CSNK2B-207ENST00000475875 CDC37Q16543 378 aaPredicted RBP16.9■□□□□ 0.3
CSNK2B-207ENST00000475875 ANKRD54Q6NXT1 300 aa16.9■□□□□ 0.3
CSNK2B-207ENST00000475875 MICAL1Q8TDZ2 1067 aa16.9■□□□□ 0.3
CSNK2B-207ENST00000475875 YTHDC1Q96MU7 727 aaKnown RBP16.9■□□□□ 0.3
CSNK2B-207ENST00000475875 NECTIN4Q96NY8 510 aa16.9■□□□□ 0.3
CSNK2B-207ENST00000475875 FTHL17Q9BXU8 183 aa16.9■□□□□ 0.3
CSNK2B-207ENST00000475875 SETD4Q9NVD3 440 aa16.9■□□□□ 0.3
CSNK2B-207ENST00000475875 DLL3Q9NYJ7 618 aa16.9■□□□□ 0.3
CSNK2B-207ENST00000475875 MAP3K20Q9NYL2 800 aaKnown RBP16.9■□□□□ 0.3
CSNK2B-207ENST00000475875 MYH7BA7E2Y1 1941 aa16.9■□□□□ 0.3
CSNK2B-207ENST00000475875 FRYLO94915 3013 aa16.89■□□□□ 0.29
CSNK2B-207ENST00000475875 PER2O15055 1255 aa16.89■□□□□ 0.29
CSNK2B-207ENST00000475875 MGAT3Q09327 533 aa16.89■□□□□ 0.29
CSNK2B-207ENST00000475875 TSHZ1Q6ZSZ6 1077 aa16.89■□□□□ 0.29
CSNK2B-207ENST00000475875 RSPH3Q86UC2 560 aa16.89■□□□□ 0.29
CSNK2B-207ENST00000475875 VSIG10LQ86VR7 867 aa16.89■□□□□ 0.29
CSNK2B-207ENST00000475875 CCDC105Q8IYK2 499 aa16.89■□□□□ 0.29
CSNK2B-207ENST00000475875 SEC62Q99442 399 aaKnown RBP16.89■□□□□ 0.29
CSNK2B-207ENST00000475875 PDCD2LQ9BRP1 358 aa16.89■□□□□ 0.29
CSNK2B-207ENST00000475875 ZNF215Q9UL58 517 aaPredicted RBP16.89■□□□□ 0.29
CSNK2B-207ENST00000475875 NRCAMQ92823 1304 aa16.89■□□□□ 0.29
CSNK2B-207ENST00000475875 NOP56O00567 594 aaKnown RBP16.88■□□□□ 0.29
CSNK2B-207ENST00000475875 RPLP2P05387 115 aaKnown RBP16.88■□□□□ 0.29
CSNK2B-207ENST00000475875 HSD17B4P51659 736 aa16.88■□□□□ 0.29
CSNK2B-207ENST00000475875 SP2Q02086 613 aa16.88■□□□□ 0.29
CSNK2B-207ENST00000475875 FBXO47Q5MNV8 452 aa16.88■□□□□ 0.29
CSNK2B-207ENST00000475875 ZMYM1Q5SVZ6 1142 aa16.88■□□□□ 0.29
CSNK2B-207ENST00000475875 SYCE2Q6PIF2 218 aa16.88■□□□□ 0.29
CSNK2B-207ENST00000475875 FAM43BQ6ZT52 329 aaPredicted RBP16.88■□□□□ 0.29
CSNK2B-207ENST00000475875 SAMD3Q8N6K7 520 aa16.88■□□□□ 0.29
CSNK2B-207ENST00000475875 LMBR1Q8WVP7 490 aa16.88■□□□□ 0.29
CSNK2B-207ENST00000475875 AAASQ9NRG9 546 aa16.88■□□□□ 0.29
CSNK2B-207ENST00000475875 PCDHB12Q9Y5F1 795 aa16.88■□□□□ 0.29
CSNK2B-207ENST00000475875 SQORQ9Y6N5 450 aa16.88■□□□□ 0.29
CSNK2B-207ENST00000475875 FOXP2O15409 715 aa16.87■□□□□ 0.29
CSNK2B-207ENST00000475875 MS4A1P11836 297 aa16.87■□□□□ 0.29
CSNK2B-207ENST00000475875 AOC1P19801 751 aa16.87■□□□□ 0.29
CSNK2B-207ENST00000475875 TECP42680 631 aa16.87■□□□□ 0.29
CSNK2B-207ENST00000475875 ARHGAP4P98171 946 aa16.87■□□□□ 0.29
CSNK2B-207ENST00000475875 RBM10P98175 930 aaKnown RBP16.87■□□□□ 0.29
CSNK2B-207ENST00000475875 ANGPT1Q15389 498 aa16.87■□□□□ 0.29
CSNK2B-207ENST00000475875 STOX1Q6ZVD7 989 aa16.87■□□□□ 0.29
CSNK2B-207ENST00000475875 PANK1Q8TE04 598 aa16.87■□□□□ 0.29
CSNK2B-207ENST00000475875 LINC01599Q8WXQ3 324 aa16.87■□□□□ 0.29
CSNK2B-207ENST00000475875 RTP3Q9BQQ7 232 aa16.87■□□□□ 0.29
CSNK2B-207ENST00000475875 ZBTB40Q9NUA8 1239 aa16.87■□□□□ 0.29
CSNK2B-207ENST00000475875 FSCN2O14926 492 aa16.86■□□□□ 0.29
CSNK2B-207ENST00000475875 ITIH3Q06033 890 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms