RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 A0A1B0GTL3 188 aa9.44□□□□□ -0.9
SMC5-203ENST00000475540 TRIM13O60858 407 aa9.44□□□□□ -0.9
SMC5-203ENST00000475540 NPTXRO95502 500 aa9.44□□□□□ -0.9
SMC5-203ENST00000475540 AMY2AP04746 511 aa9.44□□□□□ -0.9
SMC5-203ENST00000475540 AMY2BP19961 511 aa9.44□□□□□ -0.9
SMC5-203ENST00000475540 THBS2P35442 1172 aa9.44□□□□□ -0.9
SMC5-203ENST00000475540 KCNC1P48547 511 aa9.44□□□□□ -0.9
SMC5-203ENST00000475540 DLX2Q07687 328 aaPredicted RBP9.44□□□□□ -0.9
SMC5-203ENST00000475540 TCEA2Q15560 299 aa9.44□□□□□ -0.9
SMC5-203ENST00000475540 NOP9Q86U38 636 aaKnown RBP9.44□□□□□ -0.9
SMC5-203ENST00000475540 SP8Q8IXZ3 490 aa9.44□□□□□ -0.9
SMC5-203ENST00000475540 CARFQ8N187 725 aa9.44□□□□□ -0.9
SMC5-203ENST00000475540 APPBP2Q92624 585 aa9.44□□□□□ -0.9
SMC5-203ENST00000475540 CLIC6Q96NY7 704 aa9.44□□□□□ -0.9
SMC5-203ENST00000475540 CELF4Q9BZC1 486 aaKnown RBP9.44□□□□□ -0.9
SMC5-203ENST00000475540 ATP23Q9Y6H3 246 aa9.44□□□□□ -0.9
SMC5-203ENST00000475540 B4E1Z4 1266 aa9.43□□□□□ -0.9
SMC5-203ENST00000475540 SLURP1P55000 103 aa9.43□□□□□ -0.9
SMC5-203ENST00000475540 ADAM9Q13443 819 aa9.43□□□□□ -0.9
SMC5-203ENST00000475540 VASNQ6EMK4 673 aa9.43□□□□□ -0.9
SMC5-203ENST00000475540 TMC5Q6UXY8 1006 aa9.43□□□□□ -0.9
SMC5-203ENST00000475540 PARD6AQ9NPB6 346 aa9.43□□□□□ -0.9
SMC5-203ENST00000475540 LUC7LQ9NQ29 371 aaKnown RBP9.43□□□□□ -0.9
SMC5-203ENST00000475540 RIC8BQ9NVN3 520 aa9.43□□□□□ -0.9
SMC5-203ENST00000475540 ZNF561-AS1K7EIQ3 104 aa9.42□□□□□ -0.9
SMC5-203ENST00000475540 MAN2B1O00754 1011 aa9.42□□□□□ -0.9
SMC5-203ENST00000475540 CYP7B1O75881 506 aa9.42□□□□□ -0.9
SMC5-203ENST00000475540 ENO2P09104 434 aaPredicted RBP9.42□□□□□ -0.9
SMC5-203ENST00000475540 KCNA6P17658 529 aa9.42□□□□□ -0.9
SMC5-203ENST00000475540 RPL13P26373 211 aaKnown RBP9.42□□□□□ -0.9
SMC5-203ENST00000475540 FIGNQ5HY92 759 aa9.42□□□□□ -0.9
SMC5-203ENST00000475540 CISD2Q8N5K1 135 aaKnown RBP9.42□□□□□ -0.9
SMC5-203ENST00000475540 KCNC2Q96PR1 638 aa9.42□□□□□ -0.9
SMC5-203ENST00000475540 FANCLQ9NW38 375 aa9.42□□□□□ -0.9
SMC5-203ENST00000475540 MRPL42Q9Y6G3 142 aaKnown RBP9.42□□□□□ -0.9
SMC5-203ENST00000475540 ADAMTS20P59510 1910 aa9.41□□□□□ -0.9
SMC5-203ENST00000475540 OPA1O60313 960 aa9.41□□□□□ -0.9
SMC5-203ENST00000475540 RFPL3O75679 317 aa9.41□□□□□ -0.9
SMC5-203ENST00000475540 ASLP04424 464 aa9.41□□□□□ -0.9
SMC5-203ENST00000475540 PTPN1P18031 435 aaKnown RBP9.41□□□□□ -0.9
SMC5-203ENST00000475540 GJA4P35212 333 aa9.41□□□□□ -0.9
SMC5-203ENST00000475540 IGFALSP35858 605 aa9.41□□□□□ -0.9
SMC5-203ENST00000475540 C16orf86Q6ZW13 317 aa9.41□□□□□ -0.9
SMC5-203ENST00000475540 DDX53Q86TM3 631 aaKnown RBP9.41□□□□□ -0.9
SMC5-203ENST00000475540 IGSF22Q8N9C0 903 aa9.41□□□□□ -0.9
SMC5-203ENST00000475540 WRNIP1Q96S55 665 aa9.41□□□□□ -0.9
SMC5-203ENST00000475540 SMURF1Q9HCE7 757 aa9.41□□□□□ -0.9
SMC5-203ENST00000475540 RBPJLQ9UBG7 517 aa9.41□□□□□ -0.9
SMC5-203ENST00000475540 CROTQ9UKG9 612 aa9.41□□□□□ -0.9
SMC5-203ENST00000475540 FAM90A27PA6NNH2 459 aa9.4□□□□□ -0.9
SMC5-203ENST00000475540 ACOT7O00154 380 aa9.4□□□□□ -0.9
SMC5-203ENST00000475540 PABPC4Q13310 644 aaKnown RBP eCLIP9.4□□□□□ -0.9
SMC5-203ENST00000475540 PRAMEF18Q5VWM3 479 aa9.4□□□□□ -0.9
SMC5-203ENST00000475540 OVCH1Q7RTY7 1134 aa9.4□□□□□ -0.9
SMC5-203ENST00000475540 PROSER1Q86XN7 944 aa9.4□□□□□ -0.9
SMC5-203ENST00000475540 ZSWIM3Q96MP5 696 aa9.4□□□□□ -0.9
SMC5-203ENST00000475540 SPATA25Q9BR10 227 aa9.4□□□□□ -0.9
SMC5-203ENST00000475540 DLL4Q9NR61 685 aa9.4□□□□□ -0.9
SMC5-203ENST00000475540 WASF3Q9UPY6 502 aa9.4□□□□□ -0.9
SMC5-203ENST00000475540 KCNK3O14649 394 aa9.39□□□□□ -0.91
SMC5-203ENST00000475540 CLASP2O75122 1294 aaKnown RBP9.39□□□□□ -0.91
SMC5-203ENST00000475540 INHBBP09529 407 aa9.39□□□□□ -0.91
SMC5-203ENST00000475540 FLT3P36888 993 aa9.39□□□□□ -0.91
SMC5-203ENST00000475540 CD276Q5ZPR3 534 aa9.39□□□□□ -0.91
SMC5-203ENST00000475540 ABHD17CQ6PCB6 329 aa9.39□□□□□ -0.91
SMC5-203ENST00000475540 HHIPL2Q6UWX4 724 aa9.39□□□□□ -0.91
SMC5-203ENST00000475540 C2orf69Q8N8R5 385 aa9.39□□□□□ -0.91
SMC5-203ENST00000475540 DDX3XO00571 662 aaKnown RBP eCLIP9.38□□□□□ -0.91
SMC5-203ENST00000475540 PFKPQ01813 784 aa9.38□□□□□ -0.91
SMC5-203ENST00000475540 TMEM177Q53S58 311 aa9.38□□□□□ -0.91
SMC5-203ENST00000475540 PRR31Q5SQ13 230 aa9.38□□□□□ -0.91
SMC5-203ENST00000475540 ZCCHC8Q6NZY4 707 aaKnown RBP9.38□□□□□ -0.91
SMC5-203ENST00000475540 UBE2R2Q712K3 238 aaPredicted RBP9.38□□□□□ -0.91
SMC5-203ENST00000475540 JAZF1Q86VZ6 243 aa9.38□□□□□ -0.91
SMC5-203ENST00000475540 SYT8Q8NBV8 401 aa9.38□□□□□ -0.91
SMC5-203ENST00000475540 SAMD15Q9P1V8 674 aa9.38□□□□□ -0.91
SMC5-203ENST00000475540 TNPO3Q9Y5L0 923 aaKnown RBP9.38□□□□□ -0.91
SMC5-203ENST00000475540 CDC45O75419 566 aa9.37□□□□□ -0.91
SMC5-203ENST00000475540 DNAJC8O75937 253 aaPredicted RBP9.37□□□□□ -0.91
SMC5-203ENST00000475540 IL13P35225 146 aa9.37□□□□□ -0.91
SMC5-203ENST00000475540 DBPQ10586 325 aaPredicted RBP9.37□□□□□ -0.91
SMC5-203ENST00000475540 DTX3Q8N9I9 347 aa9.37□□□□□ -0.91
SMC5-203ENST00000475540 FEZF2Q8TBJ5 459 aa9.37□□□□□ -0.91
SMC5-203ENST00000475540 CD2APQ9Y5K6 639 aa9.37□□□□□ -0.91
SMC5-203ENST00000475540 SLC12A8A0AV02 714 aa9.36□□□□□ -0.91
SMC5-203ENST00000475540 SCDO00767 359 aa9.36□□□□□ -0.91
SMC5-203ENST00000475540 FBXO21O94952 628 aa9.36□□□□□ -0.91
SMC5-203ENST00000475540 SDSP20132 328 aa9.36□□□□□ -0.91
SMC5-203ENST00000475540 C21orf62-AS1Q17RA5 79 aa9.36□□□□□ -0.91
SMC5-203ENST00000475540 SKIDA1Q1XH10 827 aa9.36□□□□□ -0.91
SMC5-203ENST00000475540 MCTP2Q6DN12 878 aa9.36□□□□□ -0.91
SMC5-203ENST00000475540 TTLL10Q6ZVT0 673 aa9.36□□□□□ -0.91
SMC5-203ENST00000475540 ZDHHC14Q8IZN3 488 aa9.36□□□□□ -0.91
SMC5-203ENST00000475540 ADAMTS17Q8TE56 1095 aa9.36□□□□□ -0.91
SMC5-203ENST00000475540 L2HGDHQ9H9P8 463 aa9.36□□□□□ -0.91
SMC5-203ENST00000475540 INTS7Q9NVH2 962 aaKnown RBP9.36□□□□□ -0.91
SMC5-203ENST00000475540 ARHGAP20Q9P2F6 1191 aa9.36□□□□□ -0.91
SMC5-203ENST00000475540 MAGEC2Q9UBF1 373 aaPredicted RBP9.36□□□□□ -0.91
SMC5-203ENST00000475540 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.35□□□□□ -0.91
SMC5-203ENST00000475540 OTOL1A6NHN0 477 aaPredicted RBP9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms