RNA–Protein interactions for RNA: ENST00000475470.1

RPUSD3-215, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,413 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-215ENST00000475470 CYP26C1Q6V0L0 522 aa17.04■□□□□ 0.32
RPUSD3-215ENST00000475470 LRRC55Q6ZSA7 311 aa17.04■□□□□ 0.32
RPUSD3-215ENST00000475470 NELFCDQ8IXH7 590 aa17.04■□□□□ 0.32
RPUSD3-215ENST00000475470 DYDC2Q96IM9 177 aa17.04■□□□□ 0.32
RPUSD3-215ENST00000475470 REEP2Q9BRK0 252 aa17.04■□□□□ 0.32
RPUSD3-215ENST00000475470 TEKT3Q9BXF9 490 aa17.04■□□□□ 0.32
RPUSD3-215ENST00000475470 DNAI1Q9UI46 699 aa17.04■□□□□ 0.32
RPUSD3-215ENST00000475470 IPO5O00410 1097 aaKnown RBP17.04■□□□□ 0.32
RPUSD3-215ENST00000475470 TRAF5O00463 557 aa17.04■□□□□ 0.32
RPUSD3-215ENST00000475470 TRIM21P19474 475 aaKnown RBP17.04■□□□□ 0.32
RPUSD3-215ENST00000475470 TSR1Q2NL82 804 aaKnown RBP17.04■□□□□ 0.32
RPUSD3-215ENST00000475470 VWA3BQ502W6 1294 aa17.04■□□□□ 0.32
RPUSD3-215ENST00000475470 OR8K1Q8NGG5 319 aa17.04■□□□□ 0.32
RPUSD3-215ENST00000475470 TSC1Q92574 1164 aa17.04■□□□□ 0.32
RPUSD3-215ENST00000475470 UPF1Q92900 1129 aaKnown RBP eCLIP17.04■□□□□ 0.32
RPUSD3-215ENST00000475470 MAP3K20Q9NYL2 800 aaKnown RBP17.04■□□□□ 0.32
RPUSD3-215ENST00000475470 CAPN11Q9UMQ6 739 aa17.04■□□□□ 0.32
RPUSD3-215ENST00000475470 ZHX2Q9Y6X8 837 aa17.04■□□□□ 0.32
RPUSD3-215ENST00000475470 RPTORQ8N122 1335 aa17.03■□□□□ 0.32
RPUSD3-215ENST00000475470 FDX1P10109 184 aa17.03■□□□□ 0.32
RPUSD3-215ENST00000475470 EPS15P42566 896 aa17.03■□□□□ 0.32
RPUSD3-215ENST00000475470 GHRHRQ02643 423 aa17.03■□□□□ 0.32
RPUSD3-215ENST00000475470 MAN2A1Q16706 1144 aa17.03■□□□□ 0.32
RPUSD3-215ENST00000475470 ZCWPW2Q504Y3 356 aa17.03■□□□□ 0.32
RPUSD3-215ENST00000475470 TRIM65Q6PJ69 517 aa17.03■□□□□ 0.32
RPUSD3-215ENST00000475470 RETREG2Q8NC44 543 aa17.03■□□□□ 0.32
RPUSD3-215ENST00000475470 SCFD1Q8WVM8 642 aa17.03■□□□□ 0.32
RPUSD3-215ENST00000475470 ADGRG1Q9Y653 693 aa17.03■□□□□ 0.32
RPUSD3-215ENST00000475470 ITGB5P18084 799 aa17.02■□□□□ 0.32
RPUSD3-215ENST00000475470 SAMD3Q8N6K7 520 aa17.02■□□□□ 0.32
RPUSD3-215ENST00000475470 SYTL5Q8TDW5 730 aaPredicted RBP17.02■□□□□ 0.32
RPUSD3-215ENST00000475470 PIGOQ8TEQ8 1089 aa17.02■□□□□ 0.32
RPUSD3-215ENST00000475470 ERGIC2Q96RQ1 377 aa17.02■□□□□ 0.32
RPUSD3-215ENST00000475470 NDST4Q9H3R1 872 aa17.02■□□□□ 0.32
RPUSD3-215ENST00000475470 UNC45AQ9H3U1 944 aa17.02■□□□□ 0.32
RPUSD3-215ENST00000475470 PPP2R3BQ9Y5P8 575 aa17.02■□□□□ 0.32
RPUSD3-215ENST00000475470 PHLPP2Q6ZVD8 1323 aa17.02■□□□□ 0.32
RPUSD3-215ENST00000475470 VWA5AO00534 786 aa17.02■□□□□ 0.32
RPUSD3-215ENST00000475470 NKRFO15226 690 aaKnown RBP eCLIP17.02■□□□□ 0.32
RPUSD3-215ENST00000475470 CTIFO43310 598 aaKnown RBP17.02■□□□□ 0.32
RPUSD3-215ENST00000475470 TBCAO75347 108 aaKnown RBP17.02■□□□□ 0.32
RPUSD3-215ENST00000475470 BCRP11274 1271 aa17.02■□□□□ 0.32
RPUSD3-215ENST00000475470 ERVK-24P63145 666 aa17.02■□□□□ 0.32
RPUSD3-215ENST00000475470 RIT2Q99578 217 aa17.02■□□□□ 0.32
RPUSD3-215ENST00000475470 RUSC1Q9BVN2 902 aa17.02■□□□□ 0.32
RPUSD3-215ENST00000475470 HIRAP54198 1017 aaPredicted RBP17.01■□□□□ 0.31
RPUSD3-215ENST00000475470 HMGCS2P54868 508 aa17.01■□□□□ 0.31
RPUSD3-215ENST00000475470 RPS6P62753 249 aaKnown RBP17.01■□□□□ 0.31
RPUSD3-215ENST00000475470 EPHA7Q15375 998 aa17.01■□□□□ 0.31
RPUSD3-215ENST00000475470 SFR1Q86XK3 245 aa17.01■□□□□ 0.31
RPUSD3-215ENST00000475470 IL31RAQ8NI17 732 aa17.01■□□□□ 0.31
RPUSD3-215ENST00000475470 ATG4CQ96DT6 458 aa17.01■□□□□ 0.31
RPUSD3-215ENST00000475470 KLRG1Q96E93 195 aa17.01■□□□□ 0.31
RPUSD3-215ENST00000475470 CEP63Q96MT8 703 aa17.01■□□□□ 0.31
RPUSD3-215ENST00000475470 TRERF1Q96PN7 1200 aa17.01■□□□□ 0.31
RPUSD3-215ENST00000475470 COL4A3BPQ9Y5P4 624 aa17.01■□□□□ 0.31
RPUSD3-215ENST00000475470 C19orf81C9J6K1 198 aa17.01■□□□□ 0.31
RPUSD3-215ENST00000475470 MUTP22033 750 aa17.01■□□□□ 0.31
RPUSD3-215ENST00000475470 KLK7P49862 253 aa17.01■□□□□ 0.31
RPUSD3-215ENST00000475470 CCDC40Q4G0X9 1142 aa17.01■□□□□ 0.31
RPUSD3-215ENST00000475470 PCNX4Q63HM2 1172 aa17.01■□□□□ 0.31
RPUSD3-215ENST00000475470 RINT1Q6NUQ1 792 aa17.01■□□□□ 0.31
RPUSD3-215ENST00000475470 NIPA1Q7RTP0 329 aa17.01■□□□□ 0.31
RPUSD3-215ENST00000475470 DNAJC7Q99615 494 aa17.01■□□□□ 0.31
RPUSD3-215ENST00000475470 KCTD10Q9H3F6 313 aa17.01■□□□□ 0.31
RPUSD3-215ENST00000475470 KCNH7Q9NS40 1196 aa17.01■□□□□ 0.31
RPUSD3-215ENST00000475470 DDX39AO00148 427 aaKnown RBP17■□□□□ 0.31
RPUSD3-215ENST00000475470 GNG11P61952 73 aa17■□□□□ 0.31
RPUSD3-215ENST00000475470 SUPT20HL1Q3ZLR7 823 aa17■□□□□ 0.31
RPUSD3-215ENST00000475470 RNF207Q6ZRF8 634 aa17■□□□□ 0.31
RPUSD3-215ENST00000475470 NACC1Q96RE7 527 aa17■□□□□ 0.31
RPUSD3-215ENST00000475470 TAAR1Q96RJ0 339 aa17■□□□□ 0.31
RPUSD3-215ENST00000475470 MRPL44Q9H9J2 332 aaKnown RBP17■□□□□ 0.31
RPUSD3-215ENST00000475470 PKD2L1Q9P0L9 805 aa17■□□□□ 0.31
RPUSD3-215ENST00000475470 RSPH10B2B2RC85 870 aa17■□□□□ 0.31
RPUSD3-215ENST00000475470 RSPH10BP0C881 870 aa17■□□□□ 0.31
RPUSD3-215ENST00000475470 EIF2AK2P19525 551 aaKnown RBP17■□□□□ 0.31
RPUSD3-215ENST00000475470 PPP4R3CPQ6ZMV5 832 aa17■□□□□ 0.31
RPUSD3-215ENST00000475470 TTYH3Q9C0H2 523 aa17■□□□□ 0.31
RPUSD3-215ENST00000475470 SPON1Q9HCB6 807 aa17■□□□□ 0.31
RPUSD3-215ENST00000475470 AGPAT5Q9NUQ2 364 aa17■□□□□ 0.31
RPUSD3-215ENST00000475470 RASSF10A6NK89 507 aa16.99■□□□□ 0.31
RPUSD3-215ENST00000475470 GNA14O95837 355 aa16.99■□□□□ 0.31
RPUSD3-215ENST00000475470 ERCC3P19447 782 aa16.99■□□□□ 0.31
RPUSD3-215ENST00000475470 CASP5P51878 434 aa16.99■□□□□ 0.31
RPUSD3-215ENST00000475470 TKFCQ3LXA3 575 aa16.99■□□□□ 0.31
RPUSD3-215ENST00000475470 B3GNT9Q6UX72 402 aa16.99■□□□□ 0.31
RPUSD3-215ENST00000475470 NSMFQ6X4W1 530 aa16.99■□□□□ 0.31
RPUSD3-215ENST00000475470 ZNF397Q8NF99 534 aaPredicted RBP16.99■□□□□ 0.31
RPUSD3-215ENST00000475470 IQCDQ96DY2 449 aa16.99■□□□□ 0.31
RPUSD3-215ENST00000475470 WNK4Q96J92 1243 aa16.99■□□□□ 0.31
RPUSD3-215ENST00000475470 C12orf42Q96LP6 360 aa16.99■□□□□ 0.31
RPUSD3-215ENST00000475470 CHP1Q99653 195 aa16.99■□□□□ 0.31
RPUSD3-215ENST00000475470 PDCL3Q9H2J4 239 aa16.99■□□□□ 0.31
RPUSD3-215ENST00000475470 LZTFL1Q9NQ48 299 aa16.99■□□□□ 0.31
RPUSD3-215ENST00000475470 ZNHIT6Q9NWK9 470 aaKnown RBP16.99■□□□□ 0.31
RPUSD3-215ENST00000475470 UBIAD1Q9Y5Z9 338 aa16.99■□□□□ 0.31
RPUSD3-215ENST00000475470 GAP43P17677 238 aa16.99■□□□□ 0.31
RPUSD3-215ENST00000475470 MRPS9P82933 396 aaKnown RBP16.99■□□□□ 0.31
RPUSD3-215ENST00000475470 ZBED6P86452 979 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms