RNA–Protein interactions for RNA: ENST00000475043.5

PDPN-204, Transcript of podoplanin, humanhuman

TSL 3 BASIC

Gene PDPN, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-204ENST00000475043 CAGE1Q8TC20 777 aa10.8□□□□□ -0.68
PDPN-204ENST00000475043 C16orf70Q9BSU1 422 aa10.8□□□□□ -0.68
PDPN-204ENST00000475043 FTOQ9C0B1 505 aaKnown RBP eCLIP10.8□□□□□ -0.68
PDPN-204ENST00000475043 TTYH1Q9H313 450 aaPredicted RBP10.8□□□□□ -0.68
PDPN-204ENST00000475043 TUT1Q9H6E5 874 aaKnown RBP10.8□□□□□ -0.68
PDPN-204ENST00000475043 FAM217BQ9NTX9 383 aaPredicted RBP10.8□□□□□ -0.68
PDPN-204ENST00000475043 PKD2L1Q9P0L9 805 aa10.8□□□□□ -0.68
PDPN-204ENST00000475043 SLC4A7Q9Y6M7 1214 aa10.8□□□□□ -0.68
PDPN-204ENST00000475043 SMCO2A6NFE2 343 aa10.79□□□□□ -0.68
PDPN-204ENST00000475043 hCG_1984214I3L0E3 225 aa10.79□□□□□ -0.68
PDPN-204ENST00000475043 STXBP3O00186 592 aa10.79□□□□□ -0.68
PDPN-204ENST00000475043 LGALS2P05162 132 aa10.79□□□□□ -0.68
PDPN-204ENST00000475043 HOXD8P13378 290 aaPredicted RBP10.79□□□□□ -0.68
PDPN-204ENST00000475043 ITGB5P18084 799 aa10.79□□□□□ -0.68
PDPN-204ENST00000475043 RFC2P35250 354 aa10.79□□□□□ -0.68
PDPN-204ENST00000475043 ZNF200P98182 395 aaPredicted RBP10.79□□□□□ -0.68
PDPN-204ENST00000475043 UTP14CQ5TAP6 766 aaKnown RBP10.79□□□□□ -0.68
PDPN-204ENST00000475043 TYW1BQ6NUM6 668 aa10.79□□□□□ -0.68
PDPN-204ENST00000475043 PPP1R18Q6NYC8 613 aa10.79□□□□□ -0.68
PDPN-204ENST00000475043 ZNF713Q8N859 430 aaPredicted RBP10.79□□□□□ -0.68
PDPN-204ENST00000475043 GIMAP8Q8ND71 665 aaPredicted RBP10.79□□□□□ -0.68
PDPN-204ENST00000475043 SLC17A8Q8NDX2 589 aa10.79□□□□□ -0.68
PDPN-204ENST00000475043 AFAP1L1Q8TED9 768 aa10.79□□□□□ -0.68
PDPN-204ENST00000475043 RNF166Q96A37 237 aaPredicted RBP10.79□□□□□ -0.68
PDPN-204ENST00000475043 TIFAQ96CG3 184 aa10.79□□□□□ -0.68
PDPN-204ENST00000475043 GPRASP2Q96D09 838 aa10.79□□□□□ -0.68
PDPN-204ENST00000475043 CDHR1Q96JP9 859 aa10.79□□□□□ -0.68
PDPN-204ENST00000475043 PGBD1Q96JS3 809 aa10.79□□□□□ -0.68
PDPN-204ENST00000475043 CTAGE1Q96RT6 745 aa10.79□□□□□ -0.68
PDPN-204ENST00000475043 CDX2Q99626 313 aaPredicted RBP10.79□□□□□ -0.68
PDPN-204ENST00000475043 GPR20Q99678 358 aa10.79□□□□□ -0.68
PDPN-204ENST00000475043 SENP7Q9BQF6 1050 aa10.79□□□□□ -0.68
PDPN-204ENST00000475043 USP26Q9BXU7 913 aa10.79□□□□□ -0.68
PDPN-204ENST00000475043 PBX4Q9BYU1 374 aa10.79□□□□□ -0.68
PDPN-204ENST00000475043 RIC8AQ9NPQ8 531 aa10.79□□□□□ -0.68
PDPN-204ENST00000475043 BARHL2Q9NY43 387 aa10.79□□□□□ -0.68
PDPN-204ENST00000475043 TMEM265A0A087WTH1 108 aa10.78□□□□□ -0.68
PDPN-204ENST00000475043 EPB41L2O43491 1005 aaKnown RBP10.78□□□□□ -0.68
PDPN-204ENST00000475043 ATP9AO75110 1047 aa10.78□□□□□ -0.68
PDPN-204ENST00000475043 CKBP12277 381 aa10.78□□□□□ -0.68
PDPN-204ENST00000475043 SCG2P13521 617 aa10.78□□□□□ -0.68
PDPN-204ENST00000475043 SELPP16109 830 aa10.78□□□□□ -0.68
PDPN-204ENST00000475043 AKAP17AQ02040 695 aaKnown RBP10.78□□□□□ -0.68
PDPN-204ENST00000475043 PTK7Q13308 1070 aa10.78□□□□□ -0.68
PDPN-204ENST00000475043 PFKFB3Q16875 520 aaPredicted RBP10.78□□□□□ -0.68
PDPN-204ENST00000475043 ERICH6BQ5W0A0 696 aa10.78□□□□□ -0.68
PDPN-204ENST00000475043 RUFY3Q7L099 469 aa10.78□□□□□ -0.68
PDPN-204ENST00000475043 LRRC8DQ7L1W4 858 aa10.78□□□□□ -0.68
PDPN-204ENST00000475043 TRIM50Q86XT4 487 aa10.78□□□□□ -0.68
PDPN-204ENST00000475043 MYLIPQ8WY64 445 aa10.78□□□□□ -0.68
PDPN-204ENST00000475043 DHX38Q92620 1227 aaKnown RBP10.78□□□□□ -0.68
PDPN-204ENST00000475043 ATP6V0A1Q93050 837 aa10.78□□□□□ -0.68
PDPN-204ENST00000475043 PHKBQ93100 1093 aa10.78□□□□□ -0.68
PDPN-204ENST00000475043 VWCEQ96DN2 955 aa10.78□□□□□ -0.68
PDPN-204ENST00000475043 ZNF576Q9H609 170 aa10.78□□□□□ -0.68
PDPN-204ENST00000475043 JADE2Q9NQC1 790 aa10.78□□□□□ -0.68
PDPN-204ENST00000475043 TMEM260Q9NX78 707 aa10.78□□□□□ -0.68
PDPN-204ENST00000475043 MSRAQ9UJ68 235 aa10.78□□□□□ -0.68
PDPN-204ENST00000475043 ZNF215Q9UL58 517 aaPredicted RBP10.78□□□□□ -0.68
PDPN-204ENST00000475043 TELO2Q9Y4R8 837 aa10.78□□□□□ -0.68
PDPN-204ENST00000475043 UBIAD1Q9Y5Z9 338 aa10.78□□□□□ -0.68
PDPN-204ENST00000475043 CYP46A1Q9Y6A2 500 aa10.78□□□□□ -0.68
PDPN-204ENST00000475043 C17orf102A2RUQ5 167 aa10.77□□□□□ -0.69
PDPN-204ENST00000475043 PPFIA3O75145 1194 aa10.77□□□□□ -0.69
PDPN-204ENST00000475043 FOSP01100 380 aaPredicted RBP10.77□□□□□ -0.69
PDPN-204ENST00000475043 SMIM10L2AP0DMW4 78 aa10.77□□□□□ -0.69
PDPN-204ENST00000475043 SMIM10L2BP0DMW5 78 aa10.77□□□□□ -0.69
PDPN-204ENST00000475043 KCNA2P16389 499 aa10.77□□□□□ -0.69
PDPN-204ENST00000475043 ATP2A2P16615 1042 aaKnown RBP10.77□□□□□ -0.69
PDPN-204ENST00000475043 TCF7P36402 384 aaPredicted RBP10.77□□□□□ -0.69
PDPN-204ENST00000475043 ZNF76P36508 570 aa10.77□□□□□ -0.69
PDPN-204ENST00000475043 RABGGTBP53611 331 aa10.77□□□□□ -0.69
PDPN-204ENST00000475043 CCT2P78371 535 aaKnown RBP10.77□□□□□ -0.69
PDPN-204ENST00000475043 HIC1Q14526 733 aa10.77□□□□□ -0.69
PDPN-204ENST00000475043 RAB30Q15771 203 aa10.77□□□□□ -0.69
PDPN-204ENST00000475043 FBXL16Q8N461 479 aa10.77□□□□□ -0.69
PDPN-204ENST00000475043 SLC26A6Q9BXS9 759 aa10.77□□□□□ -0.69
PDPN-204ENST00000475043 ANO3Q9BYT9 981 aa10.77□□□□□ -0.69
PDPN-204ENST00000475043 UPF3BQ9BZI7 483 aaKnown RBP10.77□□□□□ -0.69
PDPN-204ENST00000475043 GLT8D2Q9H1C3 349 aa10.77□□□□□ -0.69
PDPN-204ENST00000475043 SLC28A3Q9HAS3 691 aa10.77□□□□□ -0.69
PDPN-204ENST00000475043 MAFGO15525 162 aa10.76□□□□□ -0.69
PDPN-204ENST00000475043 PRPF3O43395 683 aaKnown RBP10.76□□□□□ -0.69
PDPN-204ENST00000475043 PARNO95453 639 aaKnown RBP10.76□□□□□ -0.69
PDPN-204ENST00000475043 GNAT1P11488 350 aa10.76□□□□□ -0.69
PDPN-204ENST00000475043 FOSL2P15408 326 aa10.76□□□□□ -0.69
PDPN-204ENST00000475043 PDIA3P30101 505 aaKnown RBP10.76□□□□□ -0.69
PDPN-204ENST00000475043 THPOP40225 353 aa10.76□□□□□ -0.69
PDPN-204ENST00000475043 AP3B2Q13367 1082 aa10.76□□□□□ -0.69
PDPN-204ENST00000475043 GRIN2CQ14957 1233 aa10.76□□□□□ -0.69
PDPN-204ENST00000475043 ZNF618Q5T7W0 954 aa10.76□□□□□ -0.69
PDPN-204ENST00000475043 JAKMIP3Q5VZ66 844 aa10.76□□□□□ -0.69
PDPN-204ENST00000475043 TEX2Q8IWB9 1127 aa10.76□□□□□ -0.69
PDPN-204ENST00000475043 CYP2W1Q8TAV3 490 aa10.76□□□□□ -0.69
PDPN-204ENST00000475043 CCDC12Q8WUD4 166 aaPredicted RBP10.76□□□□□ -0.69
PDPN-204ENST00000475043 SEPT1Q8WYJ6 367 aa10.76□□□□□ -0.69
PDPN-204ENST00000475043 GLG1Q92896 1179 aa10.76□□□□□ -0.69
PDPN-204ENST00000475043 WNT8BQ93098 351 aa10.76□□□□□ -0.69
PDPN-204ENST00000475043 MXRA8Q9BRK3 442 aa10.76□□□□□ -0.69
PDPN-204ENST00000475043 LARP6Q9BRS8 491 aaKnown RBP10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms