RNA–Protein interactions for RNA: ENST00000474838.1

ITGB5-205, Transcript of integrin subunit beta 5, humanhuman

TSL 3

Gene ITGB5, Length 475 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB5-205ENST00000474838 SETD4Q9NVD3 440 aa18.5■□□□□ 0.55
ITGB5-205ENST00000474838 PKD2L1Q9P0L9 805 aa18.5■□□□□ 0.55
ITGB5-205ENST00000474838 SMCO2A6NFE2 343 aa18.49■□□□□ 0.55
ITGB5-205ENST00000474838 RPS6KB1P23443 525 aa18.49■□□□□ 0.55
ITGB5-205ENST00000474838 PSMA5P28066 241 aa18.49■□□□□ 0.55
ITGB5-205ENST00000474838 ADAM17P78536 824 aa18.49■□□□□ 0.55
ITGB5-205ENST00000474838 DEFB103AP81534 67 aa18.49■□□□□ 0.55
ITGB5-205ENST00000474838 IKBKEQ14164 716 aa18.49■□□□□ 0.55
ITGB5-205ENST00000474838 PFKFB3Q16875 520 aaPredicted RBP18.49■□□□□ 0.55
ITGB5-205ENST00000474838 TCTN1Q2MV58 587 aa18.49■□□□□ 0.55
ITGB5-205ENST00000474838 LMBR1Q8WVP7 490 aa18.49■□□□□ 0.55
ITGB5-205ENST00000474838 SEPT1Q8WYJ6 367 aa18.49■□□□□ 0.55
ITGB5-205ENST00000474838 MXRA8Q9BRK3 442 aa18.49■□□□□ 0.55
ITGB5-205ENST00000474838 AGXT2Q9BYV1 514 aa18.49■□□□□ 0.55
ITGB5-205ENST00000474838 CHD7Q9P2D1 2997 aa18.49■□□□□ 0.55
ITGB5-205ENST00000474838 PTPRSQ13332 1948 aa18.49■□□□□ 0.55
ITGB5-205ENST00000474838 NRCAMQ92823 1304 aa18.49■□□□□ 0.55
ITGB5-205ENST00000474838 CUL9Q8IWT3 2517 aa18.48■□□□□ 0.55
ITGB5-205ENST00000474838 GSTTP1A0A1W2PQM5 241 aa18.48■□□□□ 0.55
ITGB5-205ENST00000474838 EPB41L2O43491 1005 aaKnown RBP18.48■□□□□ 0.55
ITGB5-205ENST00000474838 TLL1O43897 1013 aa18.48■□□□□ 0.55
ITGB5-205ENST00000474838 SCG2P13521 617 aa18.48■□□□□ 0.55
ITGB5-205ENST00000474838 IGFBP4P22692 258 aa18.48■□□□□ 0.55
ITGB5-205ENST00000474838 ADD1P35611 737 aaKnown RBP18.48■□□□□ 0.55
ITGB5-205ENST00000474838 SREBF1P36956 1147 aa18.48■□□□□ 0.55
ITGB5-205ENST00000474838 CLK2P49760 499 aaKnown RBP18.48■□□□□ 0.55
ITGB5-205ENST00000474838 ARHGAP4P98171 946 aa18.48■□□□□ 0.55
ITGB5-205ENST00000474838 PGBD1Q96JS3 809 aa18.48■□□□□ 0.55
ITGB5-205ENST00000474838 COL25A1Q9BXS0 654 aaPredicted RBP18.48■□□□□ 0.55
ITGB5-205ENST00000474838 JPH1Q9HDC5 661 aaPredicted RBP18.48■□□□□ 0.55
ITGB5-205ENST00000474838 KCNH7Q9NS40 1196 aa18.48■□□□□ 0.55
ITGB5-205ENST00000474838 ERAP1Q9NZ08 941 aa18.48■□□□□ 0.55
ITGB5-205ENST00000474838 ESYT2A0FGR8 921 aa18.47■□□□□ 0.55
ITGB5-205ENST00000474838 TAP1Q03518 808 aa18.47■□□□□ 0.55
ITGB5-205ENST00000474838 CEP55Q53EZ4 464 aa18.47■□□□□ 0.55
ITGB5-205ENST00000474838 NFASCO94856 1347 aa18.47■□□□□ 0.55
ITGB5-205ENST00000474838 ARHGEF15O94989 841 aa18.46■□□□□ 0.55
ITGB5-205ENST00000474838 GJB5O95377 273 aa18.46■□□□□ 0.55
ITGB5-205ENST00000474838 CTSHP09668 335 aa18.46■□□□□ 0.55
ITGB5-205ENST00000474838 PPFIA1Q13136 1202 aa18.46■□□□□ 0.55
ITGB5-205ENST00000474838 MKRN4PQ13434 485 aaPredicted RBP18.46■□□□□ 0.55
ITGB5-205ENST00000474838 PLEKHG4Q58EX7 1191 aa18.46■□□□□ 0.55
ITGB5-205ENST00000474838 TMCO2Q7Z6W1 182 aaPredicted RBP18.46■□□□□ 0.55
ITGB5-205ENST00000474838 DBF4BQ8NFT6 615 aa18.46■□□□□ 0.55
ITGB5-205ENST00000474838 CCDC12Q8WUD4 166 aaPredicted RBP18.46■□□□□ 0.55
ITGB5-205ENST00000474838 PPM1EQ8WY54 764 aa18.46■□□□□ 0.55
ITGB5-205ENST00000474838 GLG1Q92896 1179 aa18.46■□□□□ 0.55
ITGB5-205ENST00000474838 SDF4Q9BRK5 362 aa18.46■□□□□ 0.55
ITGB5-205ENST00000474838 ZBED2Q9BTP6 218 aa18.46■□□□□ 0.55
ITGB5-205ENST00000474838 SMARCAD1Q9H4L7 1026 aa18.46■□□□□ 0.55
ITGB5-205ENST00000474838 TMEM260Q9NX78 707 aa18.46■□□□□ 0.55
ITGB5-205ENST00000474838 SLC9A2Q9UBY0 812 aa18.46■□□□□ 0.55
ITGB5-205ENST00000474838 PRUNE2Q8WUY3 3088 aa18.46■□□□□ 0.55
ITGB5-205ENST00000474838 MARK3P27448 753 aa18.45■□□□□ 0.54
ITGB5-205ENST00000474838 MCTP2Q6DN12 878 aa18.45■□□□□ 0.54
ITGB5-205ENST00000474838 TAF2Q6P1X5 1199 aa18.45■□□□□ 0.54
ITGB5-205ENST00000474838 CYP2W1Q8TAV3 490 aa18.45■□□□□ 0.54
ITGB5-205ENST00000474838 SEPT8Q92599 483 aa18.45■□□□□ 0.54
ITGB5-205ENST00000474838 ZMYND12Q9H0C1 365 aa18.45■□□□□ 0.54
ITGB5-205ENST00000474838 CERS4Q9HA82 394 aa18.45■□□□□ 0.54
ITGB5-205ENST00000474838 LCHNA4D1U4 455 aa18.44■□□□□ 0.54
ITGB5-205ENST00000474838 MEIS1O00470 390 aa18.44■□□□□ 0.54
ITGB5-205ENST00000474838 PRPF3O43395 683 aaKnown RBP18.44■□□□□ 0.54
ITGB5-205ENST00000474838 AMHP03971 560 aa18.44■□□□□ 0.54
ITGB5-205ENST00000474838 ARP10275 920 aa18.44■□□□□ 0.54
ITGB5-205ENST00000474838 EVCP57679 992 aa18.44■□□□□ 0.54
ITGB5-205ENST00000474838 ITGB3BPQ13352 177 aaPredicted RBP18.44■□□□□ 0.54
ITGB5-205ENST00000474838 GRIK4Q16099 956 aa18.44■□□□□ 0.54
ITGB5-205ENST00000474838 PKN1Q16512 942 aa18.44■□□□□ 0.54
ITGB5-205ENST00000474838 FAM26DQ5JW98 314 aa18.44■□□□□ 0.54
ITGB5-205ENST00000474838 NIPA1Q7RTP0 329 aa18.44■□□□□ 0.54
ITGB5-205ENST00000474838 RPAINQ86UA6 219 aa18.44■□□□□ 0.54
ITGB5-205ENST00000474838 ARNTL2Q8WYA1 636 aa18.44■□□□□ 0.54
ITGB5-205ENST00000474838 RAD9AQ99638 391 aa18.44■□□□□ 0.54
ITGB5-205ENST00000474838 AZI2Q9H6S1 392 aa18.44■□□□□ 0.54
ITGB5-205ENST00000474838 AGO4Q9HCK5 861 aaKnown RBP18.44■□□□□ 0.54
ITGB5-205ENST00000474838 TUBE1Q9UJT0 475 aa18.44■□□□□ 0.54
ITGB5-205ENST00000474838 MBLAC1A4D2B0 266 aaPredicted RBP18.43■□□□□ 0.54
ITGB5-205ENST00000474838 EPOPA6NHQ4 379 aa18.43■□□□□ 0.54
ITGB5-205ENST00000474838 POU3F3P20264 500 aaPredicted RBP18.43■□□□□ 0.54
ITGB5-205ENST00000474838 ZNF76P36508 570 aa18.43■□□□□ 0.54
ITGB5-205ENST00000474838 ACTR2P61160 394 aa18.43■□□□□ 0.54
ITGB5-205ENST00000474838 AKAP17AQ02040 695 aaKnown RBP18.43■□□□□ 0.54
ITGB5-205ENST00000474838 CCDC85BQ15834 202 aaPredicted RBP18.43■□□□□ 0.54
ITGB5-205ENST00000474838 JAKMIP3Q5VZ66 844 aa18.43■□□□□ 0.54
ITGB5-205ENST00000474838 RUFY4Q6ZNE9 571 aa18.43■□□□□ 0.54
ITGB5-205ENST00000474838 RUFY3Q7L099 469 aa18.43■□□□□ 0.54
ITGB5-205ENST00000474838 REXO1Q8N1G1 1221 aaKnown RBP18.43■□□□□ 0.54
ITGB5-205ENST00000474838 CRYGNQ8WXF5 182 aa18.43■□□□□ 0.54
ITGB5-205ENST00000474838 APBB2Q92870 758 aa18.43■□□□□ 0.54
ITGB5-205ENST00000474838 PHKBQ93100 1093 aa18.43■□□□□ 0.54
ITGB5-205ENST00000474838 PCYT2Q99447 389 aa18.43■□□□□ 0.54
ITGB5-205ENST00000474838 RNF26Q9BY78 433 aaPredicted RBP18.43■□□□□ 0.54
ITGB5-205ENST00000474838 C6orf50Q9HD87 102 aa18.43■□□□□ 0.54
ITGB5-205ENST00000474838 PRDM6Q9NQX0 595 aa18.43■□□□□ 0.54
ITGB5-205ENST00000474838 THEGQ9P2T0 379 aa18.43■□□□□ 0.54
ITGB5-205ENST00000474838 MICAL3Q7RTP6 2002 aa18.42■□□□□ 0.54
ITGB5-205ENST00000474838 COL4A4P53420 1690 aaPredicted RBP18.42■□□□□ 0.54
ITGB5-205ENST00000474838 GTPBP6O43824 516 aaPredicted RBP18.42■□□□□ 0.54
ITGB5-205ENST00000474838 CYP3A4P08684 503 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms