RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 RBM19Q9Y4C8 960 aaKnown RBP7.95□□□□□ -1.14
LIMD1-204ENST00000474665 XIRP2A4UGR9 3374 aa7.95□□□□□ -1.14
LIMD1-204ENST00000474665 SYNRGQ9UMZ2 1314 aa7.95□□□□□ -1.14
LIMD1-204ENST00000474665 MYO9BQ13459 2157 aa7.94□□□□□ -1.14
LIMD1-204ENST00000474665 MYH15Q9Y2K3 1946 aa7.94□□□□□ -1.14
LIMD1-204ENST00000474665 CCDC194A0A1B0GVG4 234 aa7.94□□□□□ -1.14
LIMD1-204ENST00000474665 B4DLN1 442 aa7.94□□□□□ -1.14
LIMD1-204ENST00000474665 DNM1LO00429 736 aa7.94□□□□□ -1.14
LIMD1-204ENST00000474665 MSH4O15457 936 aa7.94□□□□□ -1.14
LIMD1-204ENST00000474665 SORBS3O60504 671 aa7.94□□□□□ -1.14
LIMD1-204ENST00000474665 STAM2O75886 525 aa7.94□□□□□ -1.14
LIMD1-204ENST00000474665 CCNE2O96020 404 aa7.94□□□□□ -1.14
LIMD1-204ENST00000474665 TGFB3P10600 412 aa7.94□□□□□ -1.14
LIMD1-204ENST00000474665 HOXD8P13378 290 aaPredicted RBP7.94□□□□□ -1.14
LIMD1-204ENST00000474665 GJA9P57773 515 aa7.94□□□□□ -1.14
LIMD1-204ENST00000474665 BEX3Q00994 111 aa7.94□□□□□ -1.14
LIMD1-204ENST00000474665 RESTQ13127 1097 aa7.94□□□□□ -1.14
LIMD1-204ENST00000474665 TRIM29Q14134 588 aa7.94□□□□□ -1.14
LIMD1-204ENST00000474665 TTLL4Q14679 1199 aa7.94□□□□□ -1.14
LIMD1-204ENST00000474665 LRRC41Q15345 812 aa7.94□□□□□ -1.14
LIMD1-204ENST00000474665 CSPP1Q1MSJ5 1256 aa7.94□□□□□ -1.14
LIMD1-204ENST00000474665 LETM2Q2VYF4 491 aa7.94□□□□□ -1.14
LIMD1-204ENST00000474665 PRR16Q569H4 304 aa7.94□□□□□ -1.14
LIMD1-204ENST00000474665 CELF3Q5SZQ8 465 aaKnown RBP7.94□□□□□ -1.14
LIMD1-204ENST00000474665 MYSM1Q5VVJ2 828 aa7.94□□□□□ -1.14
LIMD1-204ENST00000474665 MCTP2Q6DN12 878 aa7.94□□□□□ -1.14
LIMD1-204ENST00000474665 FAM173BQ6P4H8 233 aa7.94□□□□□ -1.14
LIMD1-204ENST00000474665 NIPA1Q7RTP0 329 aa7.94□□□□□ -1.14
LIMD1-204ENST00000474665 NEK8Q86SG6 692 aa7.94□□□□□ -1.14
LIMD1-204ENST00000474665 FERMT3Q86UX7 667 aa7.94□□□□□ -1.14
LIMD1-204ENST00000474665 PLA2G4DQ86XP0 818 aa7.94□□□□□ -1.14
LIMD1-204ENST00000474665 C4orf32Q8N8J7 132 aa7.94□□□□□ -1.14
LIMD1-204ENST00000474665 ETNPPLQ8TBG4 499 aa7.94□□□□□ -1.14
LIMD1-204ENST00000474665 HAS1Q92839 578 aa7.94□□□□□ -1.14
LIMD1-204ENST00000474665 KCNH6Q9H252 994 aa7.94□□□□□ -1.14
LIMD1-204ENST00000474665 NKX2-4Q9H2Z4 354 aa7.94□□□□□ -1.14
LIMD1-204ENST00000474665 AGO4Q9HCK5 861 aaKnown RBP7.94□□□□□ -1.14
LIMD1-204ENST00000474665 PKD2L1Q9P0L9 805 aa7.94□□□□□ -1.14
LIMD1-204ENST00000474665 MRVI1Q9Y6F6 885 aa7.94□□□□□ -1.14
LIMD1-204ENST00000474665 CACNA1GO43497 2377 aa7.94□□□□□ -1.14
LIMD1-204ENST00000474665 KAT6AQ92794 2004 aa7.94□□□□□ -1.14
LIMD1-204ENST00000474665 A6NJR5 290 aa7.93□□□□□ -1.14
LIMD1-204ENST00000474665 DYNC1LI2O43237 492 aaPredicted RBP7.93□□□□□ -1.14
LIMD1-204ENST00000474665 FIBPO43427 364 aa7.93□□□□□ -1.14
LIMD1-204ENST00000474665 STX6O43752 255 aa7.93□□□□□ -1.14
LIMD1-204ENST00000474665 GGPS1O95749 300 aa7.93□□□□□ -1.14
LIMD1-204ENST00000474665 RARBP10826 455 aa7.93□□□□□ -1.14
LIMD1-204ENST00000474665 RAG1P15918 1043 aa7.93□□□□□ -1.14
LIMD1-204ENST00000474665 PDCP20941 246 aa7.93□□□□□ -1.14
LIMD1-204ENST00000474665 TLE2Q04725 743 aa7.93□□□□□ -1.14
LIMD1-204ENST00000474665 FPGSQ05932 587 aa7.93□□□□□ -1.14
LIMD1-204ENST00000474665 MTMR1Q13613 665 aa7.93□□□□□ -1.14
LIMD1-204ENST00000474665 SAFBQ15424 915 aaKnown RBP eCLIP7.93□□□□□ -1.14
LIMD1-204ENST00000474665 HSDL1Q3SXM5 330 aa7.93□□□□□ -1.14
LIMD1-204ENST00000474665 Q4G0T1 1027 aa7.93□□□□□ -1.14
LIMD1-204ENST00000474665 PPP4R3AQ6IN85 833 aa7.93□□□□□ -1.14
LIMD1-204ENST00000474665 MOXD1Q6UVY6 613 aa7.93□□□□□ -1.14
LIMD1-204ENST00000474665 B3GNT9Q6UX72 402 aa7.93□□□□□ -1.14
LIMD1-204ENST00000474665 CYFIP1Q7L576 1253 aa7.93□□□□□ -1.14
LIMD1-204ENST00000474665 TLK2Q86UE8 772 aa7.93□□□□□ -1.14
LIMD1-204ENST00000474665 AFG1LQ8WV93 481 aa7.93□□□□□ -1.14
LIMD1-204ENST00000474665 HERVK_113Q902F9 699 aa7.93□□□□□ -1.14
LIMD1-204ENST00000474665 SLC5A5Q92911 643 aa7.93□□□□□ -1.14
LIMD1-204ENST00000474665 EMID1Q96A84 441 aaPredicted RBP7.93□□□□□ -1.14
LIMD1-204ENST00000474665 FERMT2Q96AC1 680 aa7.93□□□□□ -1.14
LIMD1-204ENST00000474665 CHAMP1Q96JM3 812 aa7.93□□□□□ -1.14
LIMD1-204ENST00000474665 MPHOSPH6Q99547 160 aaKnown RBP7.93□□□□□ -1.14
LIMD1-204ENST00000474665 SENP7Q9BQF6 1050 aa7.93□□□□□ -1.14
LIMD1-204ENST00000474665 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.93□□□□□ -1.147e-8■■■□□ 17
LIMD1-204ENST00000474665 TMEM60Q9H2L4 133 aa7.93□□□□□ -1.14
LIMD1-204ENST00000474665 EHMT1Q9H9B1 1298 aa7.93□□□□□ -1.14
LIMD1-204ENST00000474665 BRMS1Q9HCU9 246 aa7.93□□□□□ -1.14
LIMD1-204ENST00000474665 KCNMB3Q9NPA1 279 aa7.93□□□□□ -1.14
LIMD1-204ENST00000474665 XPNPEP3Q9NQH7 507 aa7.93□□□□□ -1.14
LIMD1-204ENST00000474665 Q9Y3F1 56 aa7.93□□□□□ -1.14
LIMD1-204ENST00000474665 KIF3AQ9Y496 699 aa7.93□□□□□ -1.14
LIMD1-204ENST00000474665 GSTTP1A0A1W2PQM5 241 aa7.92□□□□□ -1.14
LIMD1-204ENST00000474665 VPS37CA5D8V6 355 aaPredicted RBP7.92□□□□□ -1.14
LIMD1-204ENST00000474665 H3BQV1 296 aa7.92□□□□□ -1.14
LIMD1-204ENST00000474665 IPO5O00410 1097 aaKnown RBP7.92□□□□□ -1.14
LIMD1-204ENST00000474665 NKRFO15226 690 aaKnown RBP eCLIP7.92□□□□□ -1.14
LIMD1-204ENST00000474665 MAFGO15525 162 aa7.92□□□□□ -1.14
LIMD1-204ENST00000474665 CCNT1O60563 726 aaKnown RBP7.92□□□□□ -1.14
LIMD1-204ENST00000474665 MSCO60682 206 aa7.92□□□□□ -1.14
LIMD1-204ENST00000474665 PSMD10O75832 226 aa7.92□□□□□ -1.14
LIMD1-204ENST00000474665 BRD1O95696 1058 aa7.92□□□□□ -1.14
LIMD1-204ENST00000474665 MYCNP04198 464 aaPredicted RBP7.92□□□□□ -1.14
LIMD1-204ENST00000474665 ATP2B1P20020 1258 aa7.92□□□□□ -1.14
LIMD1-204ENST00000474665 CST5P28325 142 aaPredicted RBP7.92□□□□□ -1.14
LIMD1-204ENST00000474665 ZNF76P36508 570 aa7.92□□□□□ -1.14
LIMD1-204ENST00000474665 SPIRE1Q08AE8 756 aa7.92□□□□□ -1.14
LIMD1-204ENST00000474665 BECN1Q14457 450 aa7.92□□□□□ -1.14
LIMD1-204ENST00000474665 SNX17Q15036 470 aa7.92□□□□□ -1.14
LIMD1-204ENST00000474665 ZNF174Q15697 407 aa7.92□□□□□ -1.14
LIMD1-204ENST00000474665 KCNA10Q16322 511 aa7.92□□□□□ -1.14
LIMD1-204ENST00000474665 IL17AQ16552 155 aa7.92□□□□□ -1.14
LIMD1-204ENST00000474665 FSCN1Q16658 493 aaKnown RBP7.92□□□□□ -1.14
LIMD1-204ENST00000474665 GNPTABQ3T906 1256 aa7.92□□□□□ -1.14
LIMD1-204ENST00000474665 MCTP1Q6DN14 999 aa7.92□□□□□ -1.14
LIMD1-204ENST00000474665 KCNV1Q6PIU1 500 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms