RNA–Protein interactions for RNA: ENST00000474644.1

COL1A1-204, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-204ENST00000474644 FAM20AQ96MK3 541 aa17.8■□□□□ 0.44
COL1A1-204ENST00000474644 C16orf70Q9BSU1 422 aa17.8■□□□□ 0.44
COL1A1-204ENST00000474644 TCEAL9Q9UHQ7 104 aa17.8■□□□□ 0.44
COL1A1-204ENST00000474644 A0A0U1RQG5 324 aaPredicted RBP17.79■□□□□ 0.44
COL1A1-204ENST00000474644 ANP32AP39687 249 aaKnown RBP17.79■□□□□ 0.44
COL1A1-204ENST00000474644 ATN1P54259 1190 aaPredicted RBP17.79■□□□□ 0.44
COL1A1-204ENST00000474644 PRPF38BQ5VTL8 546 aaKnown RBP17.79■□□□□ 0.44
COL1A1-204ENST00000474644 TRIM50Q86XT4 487 aa17.79■□□□□ 0.44
COL1A1-204ENST00000474644 TMEM60Q9H2L4 133 aa17.79■□□□□ 0.44
COL1A1-204ENST00000474644 UNC45AQ9H3U1 944 aa17.79■□□□□ 0.44
COL1A1-204ENST00000474644 VAV3Q9UKW4 847 aa17.79■□□□□ 0.44
COL1A1-204ENST00000474644 PCDHB6Q9Y5E3 794 aa17.79■□□□□ 0.44
COL1A1-204ENST00000474644 EMSYQ7Z589 1322 aa17.78■□□□□ 0.44
COL1A1-204ENST00000474644 CHMP2AO43633 222 aa17.78■□□□□ 0.44
COL1A1-204ENST00000474644 MARCH6O60337 910 aa17.78■□□□□ 0.44
COL1A1-204ENST00000474644 ATG7O95352 703 aa17.78■□□□□ 0.44
COL1A1-204ENST00000474644 PDIA4P13667 645 aaKnown RBP17.78■□□□□ 0.44
COL1A1-204ENST00000474644 PKP1Q13835 747 aa17.78■□□□□ 0.44
COL1A1-204ENST00000474644 SNX17Q15036 470 aa17.78■□□□□ 0.44
COL1A1-204ENST00000474644 LRRC26Q2I0M4 334 aa17.78■□□□□ 0.44
COL1A1-204ENST00000474644 UTP14CQ5TAP6 766 aaKnown RBP17.78■□□□□ 0.44
COL1A1-204ENST00000474644 B3GNT9Q6UX72 402 aa17.78■□□□□ 0.44
COL1A1-204ENST00000474644 ABHD15Q6UXT9 468 aa17.78■□□□□ 0.44
COL1A1-204ENST00000474644 SLC39A5Q6ZMH5 540 aa17.78■□□□□ 0.44
COL1A1-204ENST00000474644 SMAP1Q8IYB5 467 aaPredicted RBP17.78■□□□□ 0.44
COL1A1-204ENST00000474644 SLFN12Q8IYM2 578 aa17.78■□□□□ 0.44
COL1A1-204ENST00000474644 MTMR9Q96QG7 549 aa17.78■□□□□ 0.44
COL1A1-204ENST00000474644 PCYT2Q99447 389 aa17.78■□□□□ 0.44
COL1A1-204ENST00000474644 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.78■□□□□ 0.44
COL1A1-204ENST00000474644 GRIN2DO15399 1336 aa17.77■□□□□ 0.44
COL1A1-204ENST00000474644 WDR64B1ANS9 1081 aa17.77■□□□□ 0.44
COL1A1-204ENST00000474644 LGR5O75473 907 aa17.77■□□□□ 0.44
COL1A1-204ENST00000474644 BAG4O95429 457 aaKnown RBP17.77■□□□□ 0.44
COL1A1-204ENST00000474644 OR52Z1P0C646 297 aa17.77■□□□□ 0.44
COL1A1-204ENST00000474644 SUPT20HL2P0C7V6 817 aa17.77■□□□□ 0.44
COL1A1-204ENST00000474644 ZSCAN22P10073 491 aaPredicted RBP17.77■□□□□ 0.44
COL1A1-204ENST00000474644 PSEN2P49810 448 aa17.77■□□□□ 0.44
COL1A1-204ENST00000474644 JAK3P52333 1124 aa17.77■□□□□ 0.44
COL1A1-204ENST00000474644 ITGA7Q13683 1181 aa17.77■□□□□ 0.44
COL1A1-204ENST00000474644 MFSD10Q14728 455 aa17.77■□□□□ 0.44
COL1A1-204ENST00000474644 C1orf53Q5VUE5 145 aa17.77■□□□□ 0.44
COL1A1-204ENST00000474644 MIS18BP1Q6P0N0 1132 aa17.77■□□□□ 0.44
COL1A1-204ENST00000474644 VTI1AQ96AJ9 217 aa17.77■□□□□ 0.44
COL1A1-204ENST00000474644 HTATIP2Q9BUP3 242 aa17.77■□□□□ 0.44
COL1A1-204ENST00000474644 KATNAL1Q9BW62 490 aa17.77■□□□□ 0.44
COL1A1-204ENST00000474644 SCN10AQ9Y5Y9 1956 aa17.77■□□□□ 0.43
COL1A1-204ENST00000474644 IGKV6D-21A0A0A0MT36 114 aa17.76■□□□□ 0.43
COL1A1-204ENST00000474644 HAS3O00219 553 aa17.76■□□□□ 0.43
COL1A1-204ENST00000474644 SPIRE1Q08AE8 756 aa17.76■□□□□ 0.43
COL1A1-204ENST00000474644 PPP2R5CQ13362 524 aa17.76■□□□□ 0.43
COL1A1-204ENST00000474644 NBPF20Q3BBV1 942 aa17.76■□□□□ 0.43
COL1A1-204ENST00000474644 TRIM60Q495X7 471 aa17.76■□□□□ 0.43
COL1A1-204ENST00000474644 FAM173BQ6P4H8 233 aa17.76■□□□□ 0.43
COL1A1-204ENST00000474644 CCDC60Q8IWA6 550 aaPredicted RBP17.76■□□□□ 0.43
COL1A1-204ENST00000474644 C4orf32Q8N8J7 132 aa17.76■□□□□ 0.43
COL1A1-204ENST00000474644 SLC43A3Q8NBI5 491 aa17.76■□□□□ 0.43
COL1A1-204ENST00000474644 PPP1R13LQ8WUF5 828 aa17.76■□□□□ 0.43
COL1A1-204ENST00000474644 ZSCAN16Q9H4T2 348 aaPredicted RBP17.76■□□□□ 0.43
COL1A1-204ENST00000474644 DISC1Q9NRI5 854 aa17.76■□□□□ 0.43
COL1A1-204ENST00000474644 ZNF215Q9UL58 517 aaPredicted RBP17.76■□□□□ 0.43
COL1A1-204ENST00000474644 PCDHA10Q9Y5I2 948 aa17.76■□□□□ 0.43
COL1A1-204ENST00000474644 H3BRB1 525 aa17.75■□□□□ 0.43
COL1A1-204ENST00000474644 ARVCFO00192 962 aa17.75■□□□□ 0.43
COL1A1-204ENST00000474644 BACH1O14867 736 aa17.75■□□□□ 0.43
COL1A1-204ENST00000474644 F13A1P00488 732 aa17.75■□□□□ 0.43
COL1A1-204ENST00000474644 SFNP31947 248 aa17.75■□□□□ 0.43
COL1A1-204ENST00000474644 TXKP42681 527 aa17.75■□□□□ 0.43
COL1A1-204ENST00000474644 RTP1P59025 263 aa17.75■□□□□ 0.43
COL1A1-204ENST00000474644 CHMP4BP1P59074 171 aa17.75■□□□□ 0.43
COL1A1-204ENST00000474644 PTGDRQ13258 359 aa17.75■□□□□ 0.43
COL1A1-204ENST00000474644 KIAA0753Q2KHM9 967 aa17.75■□□□□ 0.43
COL1A1-204ENST00000474644 FOXD4L5Q5VV16 416 aaPredicted RBP17.75■□□□□ 0.43
COL1A1-204ENST00000474644 MIER3Q7Z3K6 550 aa17.75■□□□□ 0.43
COL1A1-204ENST00000474644 RDM1Q8NG50 284 aa17.75■□□□□ 0.43
COL1A1-204ENST00000474644 FOXD4L4Q8WXT5 416 aaPredicted RBP17.75■□□□□ 0.43
COL1A1-204ENST00000474644 GLG1Q92896 1179 aa17.75■□□□□ 0.43
COL1A1-204ENST00000474644 SMARCAD1Q9H4L7 1026 aa17.75■□□□□ 0.43
COL1A1-204ENST00000474644 TUT1Q9H6E5 874 aaKnown RBP17.75■□□□□ 0.43
COL1A1-204ENST00000474644 AZI2Q9H6S1 392 aa17.75■□□□□ 0.43
COL1A1-204ENST00000474644 TSHZ2Q9NRE2 1034 aa17.75■□□□□ 0.43
COL1A1-204ENST00000474644 SAMM50Q9Y512 469 aa17.75■□□□□ 0.43
COL1A1-204ENST00000474644 IGSF9BQ9UPX0 1349 aa17.74■□□□□ 0.43
COL1A1-204ENST00000474644 PSAPP07602 524 aa17.74■□□□□ 0.43
COL1A1-204ENST00000474644 CDK7P50613 346 aa17.74■□□□□ 0.43
COL1A1-204ENST00000474644 FAM160B1Q5W0V3 765 aa17.74■□□□□ 0.43
COL1A1-204ENST00000474644 SWSAP1Q6NVH7 229 aa17.74■□□□□ 0.43
COL1A1-204ENST00000474644 NFRKBQ6P4R8 1299 aa17.74■□□□□ 0.43
COL1A1-204ENST00000474644 AFAP1L1Q8TED9 768 aa17.74■□□□□ 0.43
COL1A1-204ENST00000474644 SEZ6LQ9BYH1 1024 aa17.74■□□□□ 0.43
COL1A1-204ENST00000474644 TTC12Q9H892 705 aaPredicted RBP17.74■□□□□ 0.43
COL1A1-204ENST00000474644 ZNF302Q9NR11 478 aa17.74■□□□□ 0.43
COL1A1-204ENST00000474644 PCDHA12Q9UN75 941 aa17.74■□□□□ 0.43
COL1A1-204ENST00000474644 ATP11BQ9Y2G3 1177 aa17.74■□□□□ 0.43
COL1A1-204ENST00000474644 ALPK3Q96L96 1907 aa17.73■□□□□ 0.43
COL1A1-204ENST00000474644 EML1O00423 815 aa17.73■□□□□ 0.43
COL1A1-204ENST00000474644 LAD1O00515 517 aa17.73■□□□□ 0.43
COL1A1-204ENST00000474644 PQBP1O60828 265 aaKnown RBP17.73■□□□□ 0.43
COL1A1-204ENST00000474644 BRD1O95696 1058 aa17.73■□□□□ 0.43
COL1A1-204ENST00000474644 MARK3P27448 753 aa17.73■□□□□ 0.43
COL1A1-204ENST00000474644 STAT5BP51692 787 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms