RNA–Protein interactions for RNA: ENST00000474637.5

GAPVD1-216, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 2,545 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-216ENST00000474637 POLR3EQ9NVU0 708 aa4.71□□□□□ -1.66
GAPVD1-216ENST00000474637 COL20A1Q9P218 1284 aa4.71□□□□□ -1.66
GAPVD1-216ENST00000474637 PCDHA6Q9UN73 950 aa4.71□□□□□ -1.66
GAPVD1-216ENST00000474637 PCDHA8Q9Y5H6 950 aa4.71□□□□□ -1.66
GAPVD1-216ENST00000474637 BAZ2BQ9UIF8 2168 aaKnown RBP4.7□□□□□ -1.66
GAPVD1-216ENST00000474637 A0A1W2PQ27 194 aa4.7□□□□□ -1.66
GAPVD1-216ENST00000474637 A0A1W2PQ64 194 aa4.7□□□□□ -1.66
GAPVD1-216ENST00000474637 A0A1W2PQD8 194 aa4.7□□□□□ -1.66
GAPVD1-216ENST00000474637 BIN1O00499 593 aa4.7□□□□□ -1.66
GAPVD1-216ENST00000474637 RIOK3O14730 519 aaKnown RBP4.7□□□□□ -1.66
GAPVD1-216ENST00000474637 TGFB3P10600 412 aa4.7□□□□□ -1.66
GAPVD1-216ENST00000474637 MYCLP12524 364 aaPredicted RBP4.7□□□□□ -1.66
GAPVD1-216ENST00000474637 CST5P28325 142 aaPredicted RBP4.7□□□□□ -1.66
GAPVD1-216ENST00000474637 GTF2F1P35269 517 aaKnown RBP eCLIP4.7□□□□□ -1.66
GAPVD1-216ENST00000474637 CLK2P49760 499 aaKnown RBP4.7□□□□□ -1.66
GAPVD1-216ENST00000474637 NLRP5P59047 1200 aa4.7□□□□□ -1.66
GAPVD1-216ENST00000474637 GNPTABQ3T906 1256 aa4.7□□□□□ -1.66
GAPVD1-216ENST00000474637 DUSP28Q4G0W2 176 aa4.7□□□□□ -1.66
GAPVD1-216ENST00000474637 ANO1Q5XXA6 986 aa4.7□□□□□ -1.66
GAPVD1-216ENST00000474637 USP17L6PQ6QN14 398 aa4.7□□□□□ -1.66
GAPVD1-216ENST00000474637 BRAPQ7Z569 592 aa4.7□□□□□ -1.66
GAPVD1-216ENST00000474637 NECAB2Q7Z6G3 386 aa4.7□□□□□ -1.66
GAPVD1-216ENST00000474637 FILIP1Q7Z7B0 1213 aa4.7□□□□□ -1.66
GAPVD1-216ENST00000474637 VSIG10LQ86VR7 867 aa4.7□□□□□ -1.66
GAPVD1-216ENST00000474637 REXO1Q8N1G1 1221 aaKnown RBP4.7□□□□□ -1.66
GAPVD1-216ENST00000474637 AOPEPQ8N6M6 819 aa4.7□□□□□ -1.66
GAPVD1-216ENST00000474637 PCSK9Q8NBP7 692 aaKnown RBP4.7□□□□□ -1.66
GAPVD1-216ENST00000474637 C16orf45Q96MC5 204 aaPredicted RBP4.7□□□□□ -1.66
GAPVD1-216ENST00000474637 PURBQ96QR8 312 aaKnown RBP4.7□□□□□ -1.66
GAPVD1-216ENST00000474637 HTATIP2Q9BUP3 242 aa4.7□□□□□ -1.66
GAPVD1-216ENST00000474637 WDR11Q9BZH6 1224 aa4.7□□□□□ -1.66
GAPVD1-216ENST00000474637 C11orf49Q9H6J7 331 aa4.7□□□□□ -1.66
GAPVD1-216ENST00000474637 BRMS1Q9HCU9 246 aa4.7□□□□□ -1.66
GAPVD1-216ENST00000474637 KIAA1217Q5T5P2 1943 aa4.7□□□□□ -1.66
GAPVD1-216ENST00000474637 PCNTO95613 3336 aa4.7□□□□□ -1.66
GAPVD1-216ENST00000474637 MOXD2PA6NHM9 499 aa4.7□□□□□ -1.66
GAPVD1-216ENST00000474637 MAFGO15525 162 aa4.7□□□□□ -1.66
GAPVD1-216ENST00000474637 KPNA6O60684 536 aa4.7□□□□□ -1.66
GAPVD1-216ENST00000474637 CABYRO75952 493 aa4.7□□□□□ -1.66
GAPVD1-216ENST00000474637 YEATS4O95619 227 aa4.7□□□□□ -1.66
GAPVD1-216ENST00000474637 ICAM3P32942 547 aa4.7□□□□□ -1.66
GAPVD1-216ENST00000474637 CPT1AP50416 773 aa4.7□□□□□ -1.66
GAPVD1-216ENST00000474637 GNL2Q13823 731 aaKnown RBP4.7□□□□□ -1.66
GAPVD1-216ENST00000474637 TRIM29Q14134 588 aa4.7□□□□□ -1.66
GAPVD1-216ENST00000474637 SLC39A14Q15043 492 aa4.7□□□□□ -1.66
GAPVD1-216ENST00000474637 LRRC41Q15345 812 aa4.7□□□□□ -1.66
GAPVD1-216ENST00000474637 ZRSR1Q15695 479 aaKnown RBP4.7□□□□□ -1.66
GAPVD1-216ENST00000474637 UBE2SQ16763 222 aa4.7□□□□□ -1.66
GAPVD1-216ENST00000474637 TPD52L1Q16890 204 aaPredicted RBP4.7□□□□□ -1.66
GAPVD1-216ENST00000474637 AXDND1Q5T1B0 1012 aaPredicted RBP4.7□□□□□ -1.66
GAPVD1-216ENST00000474637 KRT40Q6A162 431 aa4.7□□□□□ -1.66
GAPVD1-216ENST00000474637 SARM1Q6SZW1 724 aa4.7□□□□□ -1.66
GAPVD1-216ENST00000474637 NIPA1Q7RTP0 329 aa4.7□□□□□ -1.66
GAPVD1-216ENST00000474637 CEP57L1Q8IYX8 460 aa4.7□□□□□ -1.66
GAPVD1-216ENST00000474637 GIMAP8Q8ND71 665 aaPredicted RBP4.7□□□□□ -1.66
GAPVD1-216ENST00000474637 GPRASP2Q96D09 838 aa4.7□□□□□ -1.66
GAPVD1-216ENST00000474637 MRFAP1L1Q96HT8 127 aa4.7□□□□□ -1.66
GAPVD1-216ENST00000474637 ANO3Q9BYT9 981 aa4.7□□□□□ -1.66
GAPVD1-216ENST00000474637 NAT10Q9H0A0 1025 aaKnown RBP4.7□□□□□ -1.66
GAPVD1-216ENST00000474637 PCDHA4Q9UN74 947 aa4.7□□□□□ -1.66
GAPVD1-216ENST00000474637 GNEQ9Y223 722 aaKnown RBP4.7□□□□□ -1.66
GAPVD1-216ENST00000474637 MCM3APO60318 1980 aa4.69□□□□□ -1.66
GAPVD1-216ENST00000474637 SYNRGQ9UMZ2 1314 aa4.69□□□□□ -1.66
GAPVD1-216ENST00000474637 GH1P01241 217 aa4.69□□□□□ -1.66
GAPVD1-216ENST00000474637 CYP3A4P08684 503 aa4.69□□□□□ -1.66
GAPVD1-216ENST00000474637 TXNP10599 105 aaKnown RBP4.69□□□□□ -1.66
GAPVD1-216ENST00000474637 SKILP12757 684 aa4.69□□□□□ -1.66
GAPVD1-216ENST00000474637 TNNT1P13805 278 aa4.69□□□□□ -1.66
GAPVD1-216ENST00000474637 PFKFB1P16118 471 aa4.69□□□□□ -1.66
GAPVD1-216ENST00000474637 SMPD1P17405 629 aa4.69□□□□□ -1.66
GAPVD1-216ENST00000474637 CMA1P23946 247 aa4.69□□□□□ -1.66
GAPVD1-216ENST00000474637 CDC25BP30305 580 aa4.69□□□□□ -1.66
GAPVD1-216ENST00000474637 SREBF1P36956 1147 aa4.69□□□□□ -1.66
GAPVD1-216ENST00000474637 ADCYAP1R1P41586 468 aa4.69□□□□□ -1.66
GAPVD1-216ENST00000474637 MLLT1Q03111 559 aaPredicted RBP4.69□□□□□ -1.66
GAPVD1-216ENST00000474637 NEDD9Q14511 834 aa4.69□□□□□ -1.66
GAPVD1-216ENST00000474637 DPCR1Q3MIW9 517 aa4.69□□□□□ -1.66
GAPVD1-216ENST00000474637 TYW1BQ6NUM6 668 aa4.69□□□□□ -1.66
GAPVD1-216ENST00000474637 SEPT14Q6ZU15 432 aa4.69□□□□□ -1.66
GAPVD1-216ENST00000474637 EEPD1Q7L9B9 569 aa4.69□□□□□ -1.66
GAPVD1-216ENST00000474637 KRT25Q7Z3Z0 450 aa4.69□□□□□ -1.66
GAPVD1-216ENST00000474637 UBE2Q1Q7Z7E8 422 aa4.69□□□□□ -1.66
GAPVD1-216ENST00000474637 TLK2Q86UE8 772 aa4.69□□□□□ -1.66
GAPVD1-216ENST00000474637 BLIDQ8IZY5 108 aa4.69□□□□□ -1.66
GAPVD1-216ENST00000474637 KLHDC9Q8NEP7 349 aa4.69□□□□□ -1.66
GAPVD1-216ENST00000474637 OR6J1Q8NGC5 347 aa4.69□□□□□ -1.66
GAPVD1-216ENST00000474637 EMID1Q96A84 441 aaPredicted RBP4.69□□□□□ -1.66
GAPVD1-216ENST00000474637 CLIC6Q96NY7 704 aa4.69□□□□□ -1.66
GAPVD1-216ENST00000474637 INPP4AQ96PE3 977 aaPredicted RBP4.69□□□□□ -1.66
GAPVD1-216ENST00000474637 NAP1L4Q99733 375 aaKnown RBP4.69□□□□□ -1.66
GAPVD1-216ENST00000474637 PHF20Q9BVI0 1012 aa4.69□□□□□ -1.66
GAPVD1-216ENST00000474637 VPS54Q9P1Q0 977 aa4.69□□□□□ -1.66
GAPVD1-216ENST00000474637 PHF24Q9UPV7 400 aa4.69□□□□□ -1.66
GAPVD1-216ENST00000474637 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.69□□□□□ -1.66
GAPVD1-216ENST00000474637 ERICH4A6NGS2 130 aa4.69□□□□□ -1.66
GAPVD1-216ENST00000474637 USP27XA6NNY8 438 aa4.69□□□□□ -1.66
GAPVD1-216ENST00000474637 SPATA31C2B4DYI2 1134 aa4.69□□□□□ -1.66
GAPVD1-216ENST00000474637 ADAMTS4O75173 837 aa4.69□□□□□ -1.66
GAPVD1-216ENST00000474637 C6orf222P0C671 652 aaPredicted RBP4.69□□□□□ -1.66
GAPVD1-216ENST00000474637 ZNF76P36508 570 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms