RNA–Protein interactions for RNA: ENST00000474240.1

ECHDC1-213, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-213ENST00000474240 NLRP10Q86W26 655 aa4.81□□□□□ -1.64
ECHDC1-213ENST00000474240 CARFQ8N187 725 aa4.81□□□□□ -1.64
ECHDC1-213ENST00000474240 NDOR1Q9UHB4 597 aa4.81□□□□□ -1.64
ECHDC1-213ENST00000474240 FAN1Q9Y2M0 1017 aa4.81□□□□□ -1.64
ECHDC1-213ENST00000474240 MRPL42Q9Y6G3 142 aaKnown RBP4.81□□□□□ -1.64
ECHDC1-213ENST00000474240 ESYT3A0FGR9 886 aa4.8□□□□□ -1.64
ECHDC1-213ENST00000474240 ARNTLO00327 626 aa4.8□□□□□ -1.64
ECHDC1-213ENST00000474240 GNAT1P11488 350 aa4.8□□□□□ -1.64
ECHDC1-213ENST00000474240 LCP1P13796 627 aa4.8□□□□□ -1.64
ECHDC1-213ENST00000474240 TGM1P22735 817 aa4.8□□□□□ -1.64
ECHDC1-213ENST00000474240 FPR2P25090 351 aa4.8□□□□□ -1.64
ECHDC1-213ENST00000474240 ST5P78524 1137 aa4.8□□□□□ -1.64
ECHDC1-213ENST00000474240 STEAP3Q658P3 488 aa4.8□□□□□ -1.64
ECHDC1-213ENST00000474240 KCNT2Q6UVM3 1135 aa4.8□□□□□ -1.64
ECHDC1-213ENST00000474240 JAZF1Q86VZ6 243 aa4.8□□□□□ -1.64
ECHDC1-213ENST00000474240 ZC3H7AQ8IWR0 971 aaKnown RBP4.8□□□□□ -1.64
ECHDC1-213ENST00000474240 NLGN4XQ8N0W4 816 aa4.8□□□□□ -1.64
ECHDC1-213ENST00000474240 CHST13Q8NET6 341 aa4.8□□□□□ -1.64
ECHDC1-213ENST00000474240 CPA5Q8WXQ8 436 aa4.8□□□□□ -1.64
ECHDC1-213ENST00000474240 DVL3Q92997 716 aaPredicted RBP4.8□□□□□ -1.64
ECHDC1-213ENST00000474240 FBXW5Q969U6 566 aa4.8□□□□□ -1.64
ECHDC1-213ENST00000474240 SMOC1Q9H4F8 434 aa4.8□□□□□ -1.64
ECHDC1-213ENST00000474240 SLC52A2Q9HAB3 445 aa4.8□□□□□ -1.64
ECHDC1-213ENST00000474240 SLC6A20Q9NP91 592 aa4.8□□□□□ -1.64
ECHDC1-213ENST00000474240 FANCLQ9NW38 375 aa4.8□□□□□ -1.64
ECHDC1-213ENST00000474240 MAGEC2Q9UBF1 373 aaPredicted RBP4.8□□□□□ -1.64
ECHDC1-213ENST00000474240 ST6GALNAC2Q9UJ37 374 aa4.8□□□□□ -1.64
ECHDC1-213ENST00000474240 BLACEA4D250 179 aa4.79□□□□□ -1.64
ECHDC1-213ENST00000474240 PPP1R11O60927 126 aaPredicted RBP4.79□□□□□ -1.64
ECHDC1-213ENST00000474240 IGSF3O75054 1194 aa4.79□□□□□ -1.64
ECHDC1-213ENST00000474240 ASMTLO95671 621 aa4.79□□□□□ -1.64
ECHDC1-213ENST00000474240 ASLP04424 464 aa4.79□□□□□ -1.64
ECHDC1-213ENST00000474240 NCAM1P13591 858 aa4.79□□□□□ -1.64
ECHDC1-213ENST00000474240 IGFALSP35858 605 aa4.79□□□□□ -1.64
ECHDC1-213ENST00000474240 MC3RP41968 323 aa4.79□□□□□ -1.64
ECHDC1-213ENST00000474240 PRR5P85299 388 aa4.79□□□□□ -1.64
ECHDC1-213ENST00000474240 PLEKHG4Q58EX7 1191 aa4.79□□□□□ -1.64
ECHDC1-213ENST00000474240 SDE2Q6IQ49 451 aa4.79□□□□□ -1.64
ECHDC1-213ENST00000474240 C16orf59Q7L2K0 433 aa4.79□□□□□ -1.64
ECHDC1-213ENST00000474240 DDX53Q86TM3 631 aaKnown RBP4.79□□□□□ -1.64
ECHDC1-213ENST00000474240 ZC3H18Q86VM9 953 aaKnown RBP4.79□□□□□ -1.64
ECHDC1-213ENST00000474240 TTLL11Q8NHH1 800 aa4.79□□□□□ -1.64
ECHDC1-213ENST00000474240 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.79□□□□□ -1.64
ECHDC1-213ENST00000474240 ALG3Q92685 438 aa4.79□□□□□ -1.64
ECHDC1-213ENST00000474240 DDX11Q96FC9 970 aa4.79□□□□□ -1.64
ECHDC1-213ENST00000474240 CELF4Q9BZC1 486 aaKnown RBP4.79□□□□□ -1.64
ECHDC1-213ENST00000474240 PDGFDQ9GZP0 370 aaPredicted RBP4.79□□□□□ -1.64
ECHDC1-213ENST00000474240 CDIP1Q9H305 208 aa4.79□□□□□ -1.64
ECHDC1-213ENST00000474240 PCDHB4Q9Y5E5 795 aa4.79□□□□□ -1.64
ECHDC1-213ENST00000474240 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.78□□□□□ -1.64
ECHDC1-213ENST00000474240 MSCO60682 206 aa4.78□□□□□ -1.64
ECHDC1-213ENST00000474240 CRTAMO95727 393 aa4.78□□□□□ -1.64
ECHDC1-213ENST00000474240 PLATP00750 562 aa4.78□□□□□ -1.64
ECHDC1-213ENST00000474240 CANXP27824 592 aaKnown RBP4.78□□□□□ -1.64
ECHDC1-213ENST00000474240 CRY1Q16526 586 aa4.78□□□□□ -1.64
ECHDC1-213ENST00000474240 TBC1D10BQ4KMP7 808 aaPredicted RBP4.78□□□□□ -1.64
ECHDC1-213ENST00000474240 HABP4Q5JVS0 413 aaKnown RBP4.78□□□□□ -1.64
ECHDC1-213ENST00000474240 ETV3LQ6ZN32 361 aa4.78□□□□□ -1.64
ECHDC1-213ENST00000474240 EP400NLQ6ZTU2 488 aa4.78□□□□□ -1.64
ECHDC1-213ENST00000474240 OTOP3Q7RTS5 596 aa4.78□□□□□ -1.64
ECHDC1-213ENST00000474240 BRAPQ7Z569 592 aa4.78□□□□□ -1.64
ECHDC1-213ENST00000474240 KIAA0907Q7Z7F0 614 aaPredicted RBP4.78□□□□□ -1.64
ECHDC1-213ENST00000474240 MIB1Q86YT6 1006 aa4.78□□□□□ -1.64
ECHDC1-213ENST00000474240 UHMK1Q8TAS1 419 aaKnown RBP4.78□□□□□ -1.64
ECHDC1-213ENST00000474240 NINJ1Q92982 152 aa4.78□□□□□ -1.64
ECHDC1-213ENST00000474240 YIPF4Q9BSR8 244 aa4.78□□□□□ -1.64
ECHDC1-213ENST00000474240 PCED1AQ9H1Q7 454 aa4.78□□□□□ -1.64
ECHDC1-213ENST00000474240 TRIM39Q9HCM9 518 aa4.78□□□□□ -1.64
ECHDC1-213ENST00000474240 TRAF6Q9Y4K3 522 aa4.78□□□□□ -1.64
ECHDC1-213ENST00000474240 ASXL2Q76L83 1435 aa4.78□□□□□ -1.64
ECHDC1-213ENST00000474240 FZD7O75084 574 aa4.77□□□□□ -1.65
ECHDC1-213ENST00000474240 TADA3O75528 432 aa4.77□□□□□ -1.65
ECHDC1-213ENST00000474240 GJA4P35212 333 aa4.77□□□□□ -1.65
ECHDC1-213ENST00000474240 PABPC4Q13310 644 aaKnown RBP eCLIP4.77□□□□□ -1.65
ECHDC1-213ENST00000474240 GPR19Q15760 415 aa4.77□□□□□ -1.65
ECHDC1-213ENST00000474240 GIMAP6Q6P9H5 292 aa4.77□□□□□ -1.65
ECHDC1-213ENST00000474240 USP51Q70EK9 711 aa4.77□□□□□ -1.65
ECHDC1-213ENST00000474240 UBE2R2Q712K3 238 aaPredicted RBP4.77□□□□□ -1.65
ECHDC1-213ENST00000474240 MILR1Q7Z6M3 343 aa4.77□□□□□ -1.65
ECHDC1-213ENST00000474240 ZNF761Q86XN6 746 aaPredicted RBP4.77□□□□□ -1.65
ECHDC1-213ENST00000474240 FAM126BQ8IXS8 530 aa4.77□□□□□ -1.65
ECHDC1-213ENST00000474240 PCDH19Q8TAB3 1148 aa4.77□□□□□ -1.65
ECHDC1-213ENST00000474240 VPS11Q9H270 941 aa4.77□□□□□ -1.65
ECHDC1-213ENST00000474240 IPPKQ9H8X2 491 aa4.77□□□□□ -1.65
ECHDC1-213ENST00000474240 HSPBP1Q9NZL4 362 aa4.77□□□□□ -1.65
ECHDC1-213ENST00000474240 MYOTQ9UBF9 498 aa4.77□□□□□ -1.65
ECHDC1-213ENST00000474240 FBLN5Q9UBX5 448 aa4.77□□□□□ -1.65
ECHDC1-213ENST00000474240 FBXL7Q9UJT9 491 aa4.77□□□□□ -1.65
ECHDC1-213ENST00000474240 ING1Q9UK53 422 aaPredicted RBP4.77□□□□□ -1.65
ECHDC1-213ENST00000474240 DSEQ9UL01 958 aa4.77□□□□□ -1.65
ECHDC1-213ENST00000474240 PCDHA8Q9Y5H6 950 aa4.77□□□□□ -1.65
ECHDC1-213ENST00000474240 TCRBV16S1A1N1A0A5B0 115 aa4.76□□□□□ -1.65
ECHDC1-213ENST00000474240 SGSM2O43147 1006 aa4.76□□□□□ -1.65
ECHDC1-213ENST00000474240 OPA1O60313 960 aa4.76□□□□□ -1.65
ECHDC1-213ENST00000474240 RAPGEF3O95398 923 aa4.76□□□□□ -1.65
ECHDC1-213ENST00000474240 KLF10Q13118 480 aa4.76□□□□□ -1.65
ECHDC1-213ENST00000474240 CDSNQ15517 529 aa4.76□□□□□ -1.65
ECHDC1-213ENST00000474240 ARHGAP44Q17R89 818 aa4.76□□□□□ -1.65
ECHDC1-213ENST00000474240 FIGNQ5HY92 759 aa4.76□□□□□ -1.65
ECHDC1-213ENST00000474240 NIM1KQ8IY84 436 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms