RNA–Protein interactions for RNA: ENST00000474067.5

SNX13-206, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-206ENST00000474067 TOB2Q14106 344 aaPredicted RBP23.33■■□□□ 1.33
SNX13-206ENST00000474067 CNKSR3Q6P9H4 555 aa23.33■■□□□ 1.33
SNX13-206ENST00000474067 RSPH3Q86UC2 560 aa23.33■■□□□ 1.33
SNX13-206ENST00000474067 PHKBQ93100 1093 aa23.33■■□□□ 1.33
SNX13-206ENST00000474067 FAM161BQ96MY7 647 aa23.33■■□□□ 1.33
SNX13-206ENST00000474067 CYP3A4P08684 503 aa23.32■■□□□ 1.32
SNX13-206ENST00000474067 HOXC8P31273 242 aa23.32■■□□□ 1.32
SNX13-206ENST00000474067 NTRK3Q16288 839 aa23.32■■□□□ 1.32
SNX13-206ENST00000474067 GALNT17Q6IS24 598 aa23.32■■□□□ 1.32
SNX13-206ENST00000474067 TAF2Q6P1X5 1199 aa23.32■■□□□ 1.32
SNX13-206ENST00000474067 PBX4Q9BYU1 374 aa23.32■■□□□ 1.32
SNX13-206ENST00000474067 UPF3BQ9BZI7 483 aaKnown RBP23.32■■□□□ 1.32
SNX13-206ENST00000474067 ZNF576Q9H609 170 aa23.32■■□□□ 1.32
SNX13-206ENST00000474067 PCDHA11Q9Y5I1 949 aa23.32■■□□□ 1.32
SNX13-206ENST00000474067 ABHD14A-ACY1A0A1B0GW23 586 aa23.31■■□□□ 1.32
SNX13-206ENST00000474067 MEIS1O00470 390 aa23.31■■□□□ 1.32
SNX13-206ENST00000474067 ATP9AO75110 1047 aa23.31■■□□□ 1.32
SNX13-206ENST00000474067 NLRP5P59047 1200 aa23.31■■□□□ 1.32
SNX13-206ENST00000474067 PKN1Q16512 942 aa23.31■■□□□ 1.32
SNX13-206ENST00000474067 JAKMIP3Q5VZ66 844 aa23.31■■□□□ 1.32
SNX13-206ENST00000474067 PPP1R13LQ8WUF5 828 aa23.31■■□□□ 1.32
SNX13-206ENST00000474067 GAS2L1Q99501 681 aaPredicted RBP23.31■■□□□ 1.32
SNX13-206ENST00000474067 RNPEPQ9H4A4 650 aa23.31■■□□□ 1.32
SNX13-206ENST00000474067 CXXC1Q9P0U4 656 aaPredicted RBP23.31■■□□□ 1.32
SNX13-206ENST00000474067 RRN3P2A6NIE6 340 aa23.3■■□□□ 1.32
SNX13-206ENST00000474067 RSPH10B2B2RC85 870 aa23.3■■□□□ 1.32
SNX13-206ENST00000474067 CXCL10P02778 98 aa23.3■■□□□ 1.32
SNX13-206ENST00000474067 RSPH10BP0C881 870 aa23.3■■□□□ 1.32
SNX13-206ENST00000474067 THPOP40225 353 aa23.3■■□□□ 1.32
SNX13-206ENST00000474067 IKBKEQ14164 716 aa23.3■■□□□ 1.32
SNX13-206ENST00000474067 PLA2G4DQ86XP0 818 aa23.3■■□□□ 1.32
SNX13-206ENST00000474067 DHX38Q92620 1227 aaKnown RBP23.3■■□□□ 1.32
SNX13-206ENST00000474067 GUCD1Q96NT3 240 aa23.3■■□□□ 1.32
SNX13-206ENST00000474067 CTAGE1Q96RT6 745 aa23.3■■□□□ 1.32
SNX13-206ENST00000474067 CDX2Q99626 313 aaPredicted RBP23.3■■□□□ 1.32
SNX13-206ENST00000474067 SLKQ9H2G2 1235 aaPredicted RBP23.3■■□□□ 1.32
SNX13-206ENST00000474067 TBC1D22BQ9NU19 505 aa23.3■■□□□ 1.32
SNX13-206ENST00000474067 PKD2L1Q9P0L9 805 aa23.3■■□□□ 1.32
SNX13-206ENST00000474067 LAMA3Q16787 3333 aa23.3■■□□□ 1.32
SNX13-206ENST00000474067 FOSL2P15408 326 aa23.29■■□□□ 1.32
SNX13-206ENST00000474067 FAM160B1Q5W0V3 765 aa23.29■■□□□ 1.32
SNX13-206ENST00000474067 WASF1Q92558 559 aa23.29■■□□□ 1.32
SNX13-206ENST00000474067 PGBD1Q96JS3 809 aa23.29■■□□□ 1.32
SNX13-206ENST00000474067 AGO4Q9HCK5 861 aaKnown RBP23.29■■□□□ 1.32
SNX13-206ENST00000474067 TMEM260Q9NX78 707 aa23.29■■□□□ 1.32
SNX13-206ENST00000474067 PPFIA1Q13136 1202 aa23.28■■□□□ 1.32
SNX13-206ENST00000474067 ZNF618Q5T7W0 954 aa23.28■■□□□ 1.32
SNX13-206ENST00000474067 PLPPR4Q7Z2D5 763 aa23.28■■□□□ 1.32
SNX13-206ENST00000474067 TRIM50Q86XT4 487 aa23.28■■□□□ 1.32
SNX13-206ENST00000474067 TTYH1Q9H313 450 aaPredicted RBP23.28■■□□□ 1.32
SNX13-206ENST00000474067 BCAS3Q9H6U6 928 aa23.28■■□□□ 1.32
SNX13-206ENST00000474067 NCOA5Q9HCD5 579 aaKnown RBP23.28■■□□□ 1.32
SNX13-206ENST00000474067 SETD4Q9NVD3 440 aa23.28■■□□□ 1.32
SNX13-206ENST00000474067 TRIP12Q14669 1992 aaPredicted RBP23.27■■□□□ 1.32
SNX13-206ENST00000474067 GSTTP1A0A1W2PQM5 241 aa23.27■■□□□ 1.32
SNX13-206ENST00000474067 LGR5O75473 907 aa23.27■■□□□ 1.32
SNX13-206ENST00000474067 USP11P51784 963 aa23.27■■□□□ 1.32
SNX13-206ENST00000474067 TRIM71Q2Q1W2 868 aaKnown RBP23.27■■□□□ 1.32
SNX13-206ENST00000474067 FAM43BQ6ZT52 329 aaPredicted RBP23.27■■□□□ 1.32
SNX13-206ENST00000474067 SLC17A8Q8NDX2 589 aa23.27■■□□□ 1.32
SNX13-206ENST00000474067 APBB2Q92870 758 aa23.27■■□□□ 1.32
SNX13-206ENST00000474067 ZNF577Q9BSK1 485 aa23.27■■□□□ 1.32
SNX13-206ENST00000474067 VPS54Q9P1Q0 977 aa23.27■■□□□ 1.32
SNX13-206ENST00000474067 KAT6AQ92794 2004 aa23.26■■□□□ 1.31
SNX13-206ENST00000474067 DOCK5Q9H7D0 1870 aa23.26■■□□□ 1.31
SNX13-206ENST00000474067 IPO5O00410 1097 aaKnown RBP23.26■■□□□ 1.31
SNX13-206ENST00000474067 TREHO43280 583 aa23.26■■□□□ 1.31
SNX13-206ENST00000474067 STAT5BP51692 787 aa23.26■■□□□ 1.31
SNX13-206ENST00000474067 ACTR2P61160 394 aa23.26■■□□□ 1.31
SNX13-206ENST00000474067 ZNF200P98182 395 aaPredicted RBP23.26■■□□□ 1.31
SNX13-206ENST00000474067 PPP2R2DQ66LE6 453 aa23.26■■□□□ 1.31
SNX13-206ENST00000474067 MIS18BP1Q6P0N0 1132 aa23.26■■□□□ 1.31
SNX13-206ENST00000474067 RPAINQ86UA6 219 aa23.26■■□□□ 1.31
SNX13-206ENST00000474067 SMAP1Q8IYB5 467 aaPredicted RBP23.26■■□□□ 1.31
SNX13-206ENST00000474067 LMBR1Q8WVP7 490 aa23.26■■□□□ 1.31
SNX13-206ENST00000474067 SEPT8Q92599 483 aa23.26■■□□□ 1.31
SNX13-206ENST00000474067 TUBE1Q9UJT0 475 aa23.26■■□□□ 1.31
SNX13-206ENST00000474067 PCDHA4Q9UN74 947 aa23.26■■□□□ 1.31
SNX13-206ENST00000474067 TRPC6Q9Y210 931 aa23.26■■□□□ 1.31
SNX13-206ENST00000474067 SCN5AQ14524 2016 aa23.25■■□□□ 1.31
SNX13-206ENST00000474067 GRXCR1A8MXD5 290 aa23.25■■□□□ 1.31
SNX13-206ENST00000474067 M0QZ92 97 aa23.25■■□□□ 1.31
SNX13-206ENST00000474067 ARP10275 920 aa23.25■■□□□ 1.31
SNX13-206ENST00000474067 CIITAP33076 1130 aa23.25■■□□□ 1.31
SNX13-206ENST00000474067 KRT76Q01546 638 aa23.25■■□□□ 1.31
SNX13-206ENST00000474067 STK3Q13188 491 aa23.25■■□□□ 1.31
SNX13-206ENST00000474067 GRIK4Q16099 956 aa23.25■■□□□ 1.31
SNX13-206ENST00000474067 ZBED2Q9BTP6 218 aa23.25■■□□□ 1.31
SNX13-206ENST00000474067 STK36Q9NRP7 1315 aa23.25■■□□□ 1.31
SNX13-206ENST00000474067 BACH1O14867 736 aa23.24■■□□□ 1.31
SNX13-206ENST00000474067 MARK3P27448 753 aa23.24■■□□□ 1.31
SNX13-206ENST00000474067 PBX2P40425 430 aa23.24■■□□□ 1.31
SNX13-206ENST00000474067 ADAM17P78536 824 aa23.24■■□□□ 1.31
SNX13-206ENST00000474067 ZNF746Q6NUN9 644 aaPredicted RBP23.24■■□□□ 1.31
SNX13-206ENST00000474067 HERC6Q8IVU3 1022 aa23.24■■□□□ 1.31
SNX13-206ENST00000474067 CYP2W1Q8TAV3 490 aa23.24■■□□□ 1.31
SNX13-206ENST00000474067 CRYGNQ8WXF5 182 aa23.24■■□□□ 1.31
SNX13-206ENST00000474067 IL17RAQ96F46 866 aa23.24■■□□□ 1.31
SNX13-206ENST00000474067 NKX2-4Q9H2Z4 354 aa23.24■■□□□ 1.31
SNX13-206ENST00000474067 SZT2Q5T011 3432 aa23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms