RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 PCP11498 1178 aaKnown RBP5.99□□□□□ -1.45
SNRNP40-204ENST00000474025 IRS1P35568 1242 aa5.99□□□□□ -1.45
SNRNP40-204ENST00000474025 GPM6BQ13491 265 aa5.99□□□□□ -1.45
SNRNP40-204ENST00000474025 CTC1Q2NKJ3 1217 aa5.99□□□□□ -1.45
SNRNP40-204ENST00000474025 HSDL1Q3SXM5 330 aa5.99□□□□□ -1.45
SNRNP40-204ENST00000474025 HERC4Q5GLZ8 1057 aaPredicted RBP5.99□□□□□ -1.45
SNRNP40-204ENST00000474025 CELF3Q5SZQ8 465 aaKnown RBP5.99□□□□□ -1.45
SNRNP40-204ENST00000474025 ARHGEF16Q5VV41 709 aa5.99□□□□□ -1.45
SNRNP40-204ENST00000474025 MYSM1Q5VVJ2 828 aa5.99□□□□□ -1.45
SNRNP40-204ENST00000474025 RPAINQ86UA6 219 aa5.99□□□□□ -1.45
SNRNP40-204ENST00000474025 ZNF589Q86UQ0 364 aaPredicted RBP5.99□□□□□ -1.45
SNRNP40-204ENST00000474025 MCF2L2Q86YR7 1114 aa5.99□□□□□ -1.45
SNRNP40-204ENST00000474025 TMEM192Q8IY95 271 aa5.99□□□□□ -1.45
SNRNP40-204ENST00000474025 ADGRF4Q8IZF3 695 aa5.99□□□□□ -1.45
SNRNP40-204ENST00000474025 TOP1MTQ969P6 601 aa5.99□□□□□ -1.45
SNRNP40-204ENST00000474025 ZDHHC16Q969W1 377 aa5.99□□□□□ -1.45
SNRNP40-204ENST00000474025 EVI5LQ96CN4 794 aa5.99□□□□□ -1.45
SNRNP40-204ENST00000474025 FAM227BQ96M60 508 aa5.99□□□□□ -1.45
SNRNP40-204ENST00000474025 SPATA33Q96N06 139 aa5.99□□□□□ -1.45
SNRNP40-204ENST00000474025 YME1L1Q96TA2 773 aa5.99□□□□□ -1.45
SNRNP40-204ENST00000474025 ZKSCAN3Q9BRR0 538 aa5.99□□□□□ -1.45
SNRNP40-204ENST00000474025 C16orf70Q9BSU1 422 aa5.99□□□□□ -1.45
SNRNP40-204ENST00000474025 OSBPL7Q9BZF2 842 aa5.99□□□□□ -1.45
SNRNP40-204ENST00000474025 HELLSQ9NRZ9 838 aa5.99□□□□□ -1.45
SNRNP40-204ENST00000474025 CLDND1Q9NY35 253 aa5.99□□□□□ -1.45
SNRNP40-204ENST00000474025 MRPL11Q9Y3B7 192 aaKnown RBP5.99□□□□□ -1.45
SNRNP40-204ENST00000474025 ZNF292O60281 2723 aa5.99□□□□□ -1.45
SNRNP40-204ENST00000474025 RIF1Q5UIP0 2472 aaKnown RBP5.99□□□□□ -1.45
SNRNP40-204ENST00000474025 ATG2AQ2TAZ0 1938 aa5.98□□□□□ -1.45
SNRNP40-204ENST00000474025 BHMG1C9JSJ3 638 aaPredicted RBP5.98□□□□□ -1.45
SNRNP40-204ENST00000474025 C5orf67F2Z3F1 127 aa5.98□□□□□ -1.45
SNRNP40-204ENST00000474025 TREHO43280 583 aa5.98□□□□□ -1.45
SNRNP40-204ENST00000474025 NCK2O43639 380 aa5.98□□□□□ -1.45
SNRNP40-204ENST00000474025 SORBS3O60504 671 aa5.98□□□□□ -1.45
SNRNP40-204ENST00000474025 CAND2O75155 1236 aa5.98□□□□□ -1.45
SNRNP40-204ENST00000474025 UPP2O95045 317 aa5.98□□□□□ -1.45
SNRNP40-204ENST00000474025 GGPS1O95749 300 aa5.98□□□□□ -1.45
SNRNP40-204ENST00000474025 CFBP00751 764 aa5.98□□□□□ -1.45
SNRNP40-204ENST00000474025 CTSHP09668 335 aa5.98□□□□□ -1.45
SNRNP40-204ENST00000474025 SMIM10L2AP0DMW4 78 aa5.98□□□□□ -1.45
SNRNP40-204ENST00000474025 SMIM10L2BP0DMW5 78 aa5.98□□□□□ -1.45
SNRNP40-204ENST00000474025 UBA1P22314 1058 aaKnown RBP5.98□□□□□ -1.45
SNRNP40-204ENST00000474025 CTNNB1P35222 781 aa5.98□□□□□ -1.45
SNRNP40-204ENST00000474025 HSD17B4P51659 736 aa5.98□□□□□ -1.45
SNRNP40-204ENST00000474025 SP2Q02086 613 aa5.98□□□□□ -1.45
SNRNP40-204ENST00000474025 GHRHRQ02643 423 aa5.98□□□□□ -1.45
SNRNP40-204ENST00000474025 DLX2Q07687 328 aaPredicted RBP5.98□□□□□ -1.45
SNRNP40-204ENST00000474025 HYAL1Q12794 435 aa5.98□□□□□ -1.45
SNRNP40-204ENST00000474025 CAMK2BQ13554 666 aa5.98□□□□□ -1.45
SNRNP40-204ENST00000474025 SMAD2Q15796 467 aaKnown RBP5.98□□□□□ -1.45
SNRNP40-204ENST00000474025 CLUL1Q15846 466 aa5.98□□□□□ -1.45
SNRNP40-204ENST00000474025 QRICH1Q2TAL8 776 aa5.98□□□□□ -1.45
SNRNP40-204ENST00000474025 MCMDC2Q4G0Z9 681 aa5.98□□□□□ -1.45
SNRNP40-204ENST00000474025 ASPRV1Q53RT3 343 aa5.98□□□□□ -1.45
SNRNP40-204ENST00000474025 MFSD6Q6ZSS7 791 aa5.98□□□□□ -1.45
SNRNP40-204ENST00000474025 EP400NLQ6ZTU2 488 aa5.98□□□□□ -1.45
SNRNP40-204ENST00000474025 STOX1Q6ZVD7 989 aa5.98□□□□□ -1.45
SNRNP40-204ENST00000474025 DGKHQ86XP1 1220 aa5.98□□□□□ -1.45
SNRNP40-204ENST00000474025 PNMA1Q8ND90 353 aa5.98□□□□□ -1.45
SNRNP40-204ENST00000474025 IL31RAQ8NI17 732 aa5.98□□□□□ -1.45
SNRNP40-204ENST00000474025 SEPT8Q92599 483 aa5.98□□□□□ -1.45
SNRNP40-204ENST00000474025 ESR2Q92731 530 aa5.98□□□□□ -1.45
SNRNP40-204ENST00000474025 ATP6V0A1Q93050 837 aa5.98□□□□□ -1.45
SNRNP40-204ENST00000474025 PHOX2BQ99453 314 aa5.98□□□□□ -1.45
SNRNP40-204ENST00000474025 POP1Q99575 1024 aaKnown RBP5.98□□□□□ -1.45
SNRNP40-204ENST00000474025 PDCD2LQ9BRP1 358 aa5.98□□□□□ -1.45
SNRNP40-204ENST00000474025 IFIH1Q9BYX4 1025 aaKnown RBP5.98□□□□□ -1.45
SNRNP40-204ENST00000474025 JMJD4Q9H9V9 463 aa5.98□□□□□ -1.45
SNRNP40-204ENST00000474025 MUTYHQ9UIF7 546 aa5.98□□□□□ -1.45
SNRNP40-204ENST00000474025 PCDHB15Q9Y5E8 787 aa5.98□□□□□ -1.45
SNRNP40-204ENST00000474025 CACNA1AO00555 2505 aa5.98□□□□□ -1.45
SNRNP40-204ENST00000474025 RALGAPA2Q2PPJ7 1873 aa5.98□□□□□ -1.45
SNRNP40-204ENST00000474025 NLRC5Q86WI3 1866 aa5.98□□□□□ -1.45
SNRNP40-204ENST00000474025 CCDC171Q6TFL3 1326 aa5.98□□□□□ -1.45
SNRNP40-204ENST00000474025 PTPRZ1P23471 2315 aaPredicted RBP5.97□□□□□ -1.45
SNRNP40-204ENST00000474025 C17orf102A2RUQ5 167 aa5.97□□□□□ -1.45
SNRNP40-204ENST00000474025 H3BRB1 525 aa5.97□□□□□ -1.45
SNRNP40-204ENST00000474025 MBTPS2O43462 519 aa5.97□□□□□ -1.45
SNRNP40-204ENST00000474025 PPP1R11O60927 126 aaPredicted RBP5.97□□□□□ -1.45
SNRNP40-204ENST00000474025 TBX10O75333 385 aa5.97□□□□□ -1.45
SNRNP40-204ENST00000474025 LGALS2P05162 132 aa5.97□□□□□ -1.45
SNRNP40-204ENST00000474025 TGFB3P10600 412 aa5.97□□□□□ -1.45
SNRNP40-204ENST00000474025 NMIQ13287 307 aaPredicted RBP5.97□□□□□ -1.45
SNRNP40-204ENST00000474025 SMAD4Q13485 552 aaKnown RBP5.97□□□□□ -1.45
SNRNP40-204ENST00000474025 KCNV1Q6PIU1 500 aa5.97□□□□□ -1.45
SNRNP40-204ENST00000474025 VSIG10LQ86VR7 867 aa5.97□□□□□ -1.45
SNRNP40-204ENST00000474025 IQCA1Q86XH1 822 aa5.97□□□□□ -1.45
SNRNP40-204ENST00000474025 TICAM2Q86XR7 235 aa5.97□□□□□ -1.45
SNRNP40-204ENST00000474025 RNF135Q8IUD6 432 aa5.97□□□□□ -1.45
SNRNP40-204ENST00000474025 ENAHQ8N8S7 591 aaPredicted RBP5.97□□□□□ -1.45
SNRNP40-204ENST00000474025 PRSS33Q8NF86 280 aa5.97□□□□□ -1.45
SNRNP40-204ENST00000474025 APBB2Q92870 758 aa5.97□□□□□ -1.45
SNRNP40-204ENST00000474025 GPKOWQ92917 476 aaPredicted RBP eCLIP5.97□□□□□ -1.452e-8■□□□□ 11.2
SNRNP40-204ENST00000474025 CLP1Q92989 425 aaKnown RBP5.97□□□□□ -1.45
SNRNP40-204ENST00000474025 C11orf84Q9BUA3 381 aaPredicted RBP5.97□□□□□ -1.45
SNRNP40-204ENST00000474025 LMAN2LQ9H0V9 348 aa5.97□□□□□ -1.45
SNRNP40-204ENST00000474025 RNPEPQ9H4A4 650 aa5.97□□□□□ -1.45
SNRNP40-204ENST00000474025 RNF41Q9H4P4 317 aaPredicted RBP5.97□□□□□ -1.45
SNRNP40-204ENST00000474025 TUT1Q9H6E5 874 aaKnown RBP5.97□□□□□ -1.45
SNRNP40-204ENST00000474025 KAT14Q9H8E8 782 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms