RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 COG1Q8WTW3 980 aa5.57□□□□□ -1.52
BRCA1-212ENST00000473961 HOOK2Q96ED9 719 aa5.57□□□□□ -1.52
BRCA1-212ENST00000473961 CCDC120Q96HB5 630 aa5.57□□□□□ -1.52
BRCA1-212ENST00000473961 SLC13A1Q9BZW2 595 aa5.57□□□□□ -1.52
BRCA1-212ENST00000473961 SPTLC3Q9NUV7 552 aa5.57□□□□□ -1.52
BRCA1-212ENST00000473961 OXSMQ9NWU1 459 aa5.57□□□□□ -1.52
BRCA1-212ENST00000473961 ZNF180Q9UJW8 692 aa5.57□□□□□ -1.52
BRCA1-212ENST00000473961 TMEM82A0PJX8 343 aa5.56□□□□□ -1.52
BRCA1-212ENST00000473961 RFPL1O75677 317 aa5.56□□□□□ -1.52
BRCA1-212ENST00000473961 MYBL2P10244 700 aa5.56□□□□□ -1.52
BRCA1-212ENST00000473961 PDE6AP16499 860 aa5.56□□□□□ -1.52
BRCA1-212ENST00000473961 KIR2DL1P43626 348 aaPredicted RBP5.56□□□□□ -1.52
BRCA1-212ENST00000473961 KIR2DL2P43627 348 aaPredicted RBP5.56□□□□□ -1.52
BRCA1-212ENST00000473961 PHC1P78364 1004 aa5.56□□□□□ -1.52
BRCA1-212ENST00000473961 KRT85P78386 507 aa5.56□□□□□ -1.52
BRCA1-212ENST00000473961 IRF9Q00978 393 aa5.56□□□□□ -1.52
BRCA1-212ENST00000473961 PRKCQQ04759 706 aa5.56□□□□□ -1.52
BRCA1-212ENST00000473961 KLF1Q13351 362 aaPredicted RBP5.56□□□□□ -1.52
BRCA1-212ENST00000473961 HDAC1Q13547 482 aaPredicted RBP5.56□□□□□ -1.52
BRCA1-212ENST00000473961 FIGNQ5HY92 759 aa5.56□□□□□ -1.52
BRCA1-212ENST00000473961 GPR158Q5T848 1215 aa5.56□□□□□ -1.52
BRCA1-212ENST00000473961 MBLAC2Q68D91 279 aa5.56□□□□□ -1.52
BRCA1-212ENST00000473961 NXNQ6DKJ4 435 aa5.56□□□□□ -1.52
BRCA1-212ENST00000473961 HHIPL2Q6UWX4 724 aa5.56□□□□□ -1.52
BRCA1-212ENST00000473961 PNMA8AQ86V59 439 aaPredicted RBP5.56□□□□□ -1.52
BRCA1-212ENST00000473961 Q8N1Y9 231 aa5.56□□□□□ -1.52
BRCA1-212ENST00000473961 PLD6Q8N2A8 252 aaKnown RBP5.56□□□□□ -1.52
BRCA1-212ENST00000473961 TSR2Q969E8 191 aaKnown RBP5.56□□□□□ -1.52
BRCA1-212ENST00000473961 MAP6Q96JE9 813 aa5.56□□□□□ -1.52
BRCA1-212ENST00000473961 CCDC8Q9H0W5 538 aaPredicted RBP5.56□□□□□ -1.52
BRCA1-212ENST00000473961 ATP13A1Q9HD20 1204 aa5.56□□□□□ -1.52
BRCA1-212ENST00000473961 ACSS2Q9NR19 701 aa5.56□□□□□ -1.52
BRCA1-212ENST00000473961 MARCH2Q9P0N8 246 aa5.56□□□□□ -1.52
BRCA1-212ENST00000473961 GABBR1Q9UBS5 961 aa5.56□□□□□ -1.52
BRCA1-212ENST00000473961 VAV3Q9UKW4 847 aa5.56□□□□□ -1.52
BRCA1-212ENST00000473961 PLAGL2Q9UPG8 496 aa5.56□□□□□ -1.52
BRCA1-212ENST00000473961 SPO11Q9Y5K1 396 aa5.56□□□□□ -1.52
BRCA1-212ENST00000473961 A0A1W2PQJ5 194 aa5.55□□□□□ -1.52
BRCA1-212ENST00000473961 WTIPA6NIX2 430 aaPredicted RBP5.55□□□□□ -1.52
BRCA1-212ENST00000473961 C22orf46C9J442 243 aa5.55□□□□□ -1.52
BRCA1-212ENST00000473961 ZNF561-AS1K7EIQ3 104 aa5.55□□□□□ -1.52
BRCA1-212ENST00000473961 ARNTLO00327 626 aa5.55□□□□□ -1.52
BRCA1-212ENST00000473961 KRT37O76014 449 aa5.55□□□□□ -1.52
BRCA1-212ENST00000473961 CYP17A1P05093 508 aa5.55□□□□□ -1.52
BRCA1-212ENST00000473961 KRT15P19012 456 aa5.55□□□□□ -1.52
BRCA1-212ENST00000473961 GJA4P35212 333 aa5.55□□□□□ -1.52
BRCA1-212ENST00000473961 CD96P40200 585 aa5.55□□□□□ -1.52
BRCA1-212ENST00000473961 RECQLP46063 649 aaPredicted RBP5.55□□□□□ -1.52
BRCA1-212ENST00000473961 CHRNEQ04844 493 aa5.55□□□□□ -1.52
BRCA1-212ENST00000473961 IKZF1Q13422 519 aa5.55□□□□□ -1.52
BRCA1-212ENST00000473961 GFOD2Q3B7J2 385 aa5.55□□□□□ -1.52
BRCA1-212ENST00000473961 FAM102BQ5T8I3 360 aa5.55□□□□□ -1.52
BRCA1-212ENST00000473961 CXorf57Q6NSI4 855 aaKnown RBP5.55□□□□□ -1.52
BRCA1-212ENST00000473961 CYP4F22Q6NT55 531 aa5.55□□□□□ -1.52
BRCA1-212ENST00000473961 OTOP3Q7RTS5 596 aa5.55□□□□□ -1.52
BRCA1-212ENST00000473961 RIOX2Q8IUF8 465 aa5.55□□□□□ -1.52
BRCA1-212ENST00000473961 TCEAL8Q8IYN2 117 aa5.55□□□□□ -1.52
BRCA1-212ENST00000473961 LZTR1Q8N653 840 aa5.55□□□□□ -1.52
BRCA1-212ENST00000473961 NLGN2Q8NFZ4 835 aa5.55□□□□□ -1.52
BRCA1-212ENST00000473961 KCNG1Q9UIX4 513 aa5.55□□□□□ -1.52
BRCA1-212ENST00000473961 CBLCQ9ULV8 474 aa5.55□□□□□ -1.52
BRCA1-212ENST00000473961 LUC7L2Q9Y383 392 aaKnown RBP5.55□□□□□ -1.52
BRCA1-212ENST00000473961 NOC2LQ9Y3T9 749 aaKnown RBP5.55□□□□□ -1.52
BRCA1-212ENST00000473961 TAF6LQ9Y6J9 622 aa5.55□□□□□ -1.52
BRCA1-212ENST00000473961 X6R8D5 127 aa5.55□□□□□ -1.52
BRCA1-212ENST00000473961 WASH4PA8MWX3 477 aa5.54□□□□□ -1.52
BRCA1-212ENST00000473961 PSPNO60542 156 aa5.54□□□□□ -1.52
BRCA1-212ENST00000473961 ESR1P03372 595 aa5.54□□□□□ -1.52
BRCA1-212ENST00000473961 MYL1P05976 194 aa5.54□□□□□ -1.52
BRCA1-212ENST00000473961 ZSCAN20P17040 1043 aaPredicted RBP5.54□□□□□ -1.52
BRCA1-212ENST00000473961 CD40P25942 277 aa5.54□□□□□ -1.52
BRCA1-212ENST00000473961 GNALP38405 381 aa5.54□□□□□ -1.52
BRCA1-212ENST00000473961 OS9Q13438 667 aaPredicted RBP5.54□□□□□ -1.52
BRCA1-212ENST00000473961 SLC14A2Q15849 920 aa5.54□□□□□ -1.52
BRCA1-212ENST00000473961 KCNMB1Q16558 191 aa5.54□□□□□ -1.52
BRCA1-212ENST00000473961 AOC3Q16853 763 aa5.54□□□□□ -1.52
BRCA1-212ENST00000473961 ABCB5Q2M3G0 1257 aa5.54□□□□□ -1.52
BRCA1-212ENST00000473961 BROXQ5VW32 411 aa5.54□□□□□ -1.52
BRCA1-212ENST00000473961 GALNT18Q6P9A2 607 aa5.54□□□□□ -1.52
BRCA1-212ENST00000473961 ARHGAP36Q6ZRI8 547 aa5.54□□□□□ -1.52
BRCA1-212ENST00000473961 RASSF3Q86WH2 238 aa5.54□□□□□ -1.52
BRCA1-212ENST00000473961 NME9Q86XW9 330 aa5.54□□□□□ -1.52
BRCA1-212ENST00000473961 SPPL2CQ8IUH8 684 aa5.54□□□□□ -1.52
BRCA1-212ENST00000473961 RAVER1Q8IY67 606 aaKnown RBP5.54□□□□□ -1.52
BRCA1-212ENST00000473961 KIAA1958Q8N8K9 716 aa5.54□□□□□ -1.52
BRCA1-212ENST00000473961 ANKS4BQ8N8V4 417 aa5.54□□□□□ -1.52
BRCA1-212ENST00000473961 LIN37Q96GY3 246 aaPredicted RBP5.54□□□□□ -1.52
BRCA1-212ENST00000473961 JAM3Q9BX67 310 aa5.54□□□□□ -1.52
BRCA1-212ENST00000473961 TRIM8Q9BZR9 551 aa5.54□□□□□ -1.52
BRCA1-212ENST00000473961 MYH16Q9H6N6 1097 aa5.54□□□□□ -1.52
BRCA1-212ENST00000473961 SLC6A20Q9NP91 592 aa5.54□□□□□ -1.52
BRCA1-212ENST00000473961 TOMM22Q9NS69 142 aa5.54□□□□□ -1.52
BRCA1-212ENST00000473961 PPARGC1AQ9UBK2 798 aaKnown RBP5.54□□□□□ -1.52
BRCA1-212ENST00000473961 DSEQ9UL01 958 aa5.54□□□□□ -1.52
BRCA1-212ENST00000473961 ANKRD6Q9Y2G4 727 aa5.54□□□□□ -1.52
BRCA1-212ENST00000473961 GIT1Q9Y2X7 761 aa5.54□□□□□ -1.52
BRCA1-212ENST00000473961 PLEKHD1A6NEE1 506 aa5.53□□□□□ -1.52
BRCA1-212ENST00000473961 FADS2P1A8MWK0 482 aa5.53□□□□□ -1.52
BRCA1-212ENST00000473961 ABLIM3O94929 683 aa5.53□□□□□ -1.52
BRCA1-212ENST00000473961 FUCA1P04066 466 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms