RNA–Protein interactions for RNA: ENST00000473778.5

C9orf3-214, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 2,396 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-214ENST00000473778 PROM2Q8N271 834 aa12.07□□□□□ -0.48
C9orf3-214ENST00000473778 CUL5Q93034 780 aa12.07□□□□□ -0.48
C9orf3-214ENST00000473778 LSM14BQ9BX40 385 aaKnown RBP12.07□□□□□ -0.48
C9orf3-214ENST00000473778 RAB34Q9BZG1 259 aa12.07□□□□□ -0.48
C9orf3-214ENST00000473778 PSTPIP2Q9H939 334 aa12.07□□□□□ -0.48
C9orf3-214ENST00000473778 CEP72Q9P209 647 aa12.07□□□□□ -0.48
C9orf3-214ENST00000473778 PCDHAC2Q9Y5I4 1007 aa12.07□□□□□ -0.48
C9orf3-214ENST00000473778 LOC102724159A0A0B4J2E5 919 aa12.07□□□□□ -0.48
C9orf3-214ENST00000473778 POTEFA5A3E0 1075 aa12.07□□□□□ -0.48
C9orf3-214ENST00000473778 ZBTB5O15062 677 aa12.07□□□□□ -0.48
C9orf3-214ENST00000473778 PALMO75781 387 aa12.07□□□□□ -0.48
C9orf3-214ENST00000473778 POTEIP0CG38 1075 aa12.07□□□□□ -0.48
C9orf3-214ENST00000473778 ACTN1P12814 892 aa12.07□□□□□ -0.48
C9orf3-214ENST00000473778 CYP11B2P19099 503 aa12.07□□□□□ -0.48
C9orf3-214ENST00000473778 PSMC6P62333 389 aa12.07□□□□□ -0.48
C9orf3-214ENST00000473778 PWP2Q15269 919 aaKnown RBP12.07□□□□□ -0.48
C9orf3-214ENST00000473778 SKIDA1Q1XH10 827 aa12.07□□□□□ -0.48
C9orf3-214ENST00000473778 CCDC40Q4G0X9 1142 aa12.07□□□□□ -0.48
C9orf3-214ENST00000473778 POTEGQ6S5H5 508 aa12.07□□□□□ -0.48
C9orf3-214ENST00000473778 POTEEQ6S8J3 1075 aa12.07□□□□□ -0.48
C9orf3-214ENST00000473778 ALS2CR12Q96Q35 445 aa12.07□□□□□ -0.48
C9orf3-214ENST00000473778 STIM2Q9P246 746 aa12.07□□□□□ -0.48
C9orf3-214ENST00000473778 CLGNO14967 610 aa12.06□□□□□ -0.48
C9orf3-214ENST00000473778 FGFR1OPO95684 399 aaKnown RBP12.06□□□□□ -0.48
C9orf3-214ENST00000473778 FAM153BP0C7A2 387 aa12.06□□□□□ -0.48
C9orf3-214ENST00000473778 PLA2G4BP0C869 781 aa12.06□□□□□ -0.48
C9orf3-214ENST00000473778 HOXD13P35453 343 aa12.06□□□□□ -0.48
C9orf3-214ENST00000473778 FAM153CQ494X1 144 aa12.06□□□□□ -0.48
C9orf3-214ENST00000473778 ICE2Q659A1 982 aa12.06□□□□□ -0.48
C9orf3-214ENST00000473778 FAM133AQ8N9E0 248 aa12.06□□□□□ -0.48
C9orf3-214ENST00000473778 TBC1D5Q92609 795 aa12.06□□□□□ -0.48
C9orf3-214ENST00000473778 GOLPH3Q9H4A6 298 aa12.06□□□□□ -0.48
C9orf3-214ENST00000473778 POLD4Q9HCU8 107 aa12.06□□□□□ -0.48
C9orf3-214ENST00000473778 KCNMB3Q9NPA1 279 aa12.06□□□□□ -0.48
C9orf3-214ENST00000473778 ADAMTS1Q9UHI8 967 aa12.06□□□□□ -0.48
C9orf3-214ENST00000473778 FAM153AQ9UHL3 310 aa12.06□□□□□ -0.48
C9orf3-214ENST00000473778 QSER1Q2KHR3 1735 aa12.06□□□□□ -0.48
C9orf3-214ENST00000473778 SHOX2O60902 331 aaPredicted RBP12.06□□□□□ -0.48
C9orf3-214ENST00000473778 SNAP25P60880 206 aa12.06□□□□□ -0.48
C9orf3-214ENST00000473778 SPIRE1Q08AE8 756 aa12.06□□□□□ -0.48
C9orf3-214ENST00000473778 SFMBT2Q5VUG0 894 aa12.06□□□□□ -0.48
C9orf3-214ENST00000473778 IQCEQ6IPM2 695 aa12.06□□□□□ -0.48
C9orf3-214ENST00000473778 FOXR2Q6PJQ5 311 aa12.06□□□□□ -0.48
C9orf3-214ENST00000473778 GPBP1Q86WP2 473 aa12.06□□□□□ -0.48
C9orf3-214ENST00000473778 TBC1D22AQ8WUA7 517 aa12.06□□□□□ -0.48
C9orf3-214ENST00000473778 ARL8AQ96BM9 186 aa12.06□□□□□ -0.48
C9orf3-214ENST00000473778 NOX5Q96PH1 765 aa12.06□□□□□ -0.48
C9orf3-214ENST00000473778 TSG101Q99816 390 aa12.06□□□□□ -0.48
C9orf3-214ENST00000473778 SH3GL2Q99962 352 aa12.06□□□□□ -0.48
C9orf3-214ENST00000473778 GANQ9H2C0 597 aa12.06□□□□□ -0.48
C9orf3-214ENST00000473778 CWC15Q9P013 229 aaKnown RBP12.06□□□□□ -0.48
C9orf3-214ENST00000473778 ATP6V0A2Q9Y487 856 aa12.06□□□□□ -0.48
C9orf3-214ENST00000473778 SRCAPQ6ZRS2 3230 aa12.06□□□□□ -0.48
C9orf3-214ENST00000473778 TOM1O60784 492 aa12.05□□□□□ -0.48
C9orf3-214ENST00000473778 SERPING1P05155 500 aa12.05□□□□□ -0.48
C9orf3-214ENST00000473778 POLD1P28340 1107 aa12.05□□□□□ -0.48
C9orf3-214ENST00000473778 HSPA1LP34931 641 aa12.05□□□□□ -0.48
C9orf3-214ENST00000473778 CARSP49589 748 aaKnown RBP12.05□□□□□ -0.48
C9orf3-214ENST00000473778 CACNB3P54284 484 aa12.05□□□□□ -0.48
C9orf3-214ENST00000473778 SLC12A3P55017 1021 aa12.05□□□□□ -0.48
C9orf3-214ENST00000473778 MARSP56192 900 aaKnown RBP12.05□□□□□ -0.48
C9orf3-214ENST00000473778 RNASE9P60153 205 aaKnown RBP12.05□□□□□ -0.48
C9orf3-214ENST00000473778 QRICH1Q2TAL8 776 aa12.05□□□□□ -0.48
C9orf3-214ENST00000473778 SLC9C1Q4G0N8 1177 aa12.05□□□□□ -0.48
C9orf3-214ENST00000473778 TTMPQ5BVD1 217 aa12.05□□□□□ -0.48
C9orf3-214ENST00000473778 HERC4Q5GLZ8 1057 aaPredicted RBP12.05□□□□□ -0.48
C9orf3-214ENST00000473778 PPP1R18Q6NYC8 613 aa12.05□□□□□ -0.48
C9orf3-214ENST00000473778 CDC42EP5Q6NZY7 148 aa12.05□□□□□ -0.48
C9orf3-214ENST00000473778 RBM17Q96I25 401 aaKnown RBP12.05□□□□□ -0.48
C9orf3-214ENST00000473778 RABEP2Q9H5N1 569 aa12.05□□□□□ -0.48
C9orf3-214ENST00000473778 EMILIN3Q9NT22 766 aa12.05□□□□□ -0.48
C9orf3-214ENST00000473778 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.05□□□□□ -0.48
C9orf3-214ENST00000473778 FRMD3A2A2Y4 597 aa12.05□□□□□ -0.48
C9orf3-214ENST00000473778 GOLGA6CA6NDK9 693 aa12.05□□□□□ -0.48
C9orf3-214ENST00000473778 MEIS1O00470 390 aa12.05□□□□□ -0.48
C9orf3-214ENST00000473778 MPHOSPH10O00566 681 aaKnown RBP12.05□□□□□ -0.48
C9orf3-214ENST00000473778 MEIS2O14770 477 aa12.05□□□□□ -0.48
C9orf3-214ENST00000473778 GRIN2DO15399 1336 aa12.05□□□□□ -0.48
C9orf3-214ENST00000473778 IVLP07476 585 aa12.05□□□□□ -0.48
C9orf3-214ENST00000473778 GOLGA6DP0CG33 693 aa12.05□□□□□ -0.48
C9orf3-214ENST00000473778 HOXA10P31260 410 aaPredicted RBP12.05□□□□□ -0.48
C9orf3-214ENST00000473778 NAP1L1P55209 391 aaKnown RBP12.05□□□□□ -0.48
C9orf3-214ENST00000473778 RAPGEF1Q13905 1077 aa12.05□□□□□ -0.48
C9orf3-214ENST00000473778 NAB2Q15742 525 aa12.05□□□□□ -0.48
C9orf3-214ENST00000473778 SLC18A3Q16572 532 aa12.05□□□□□ -0.48
C9orf3-214ENST00000473778 CCDC181Q5TID7 509 aa12.05□□□□□ -0.48
C9orf3-214ENST00000473778 TTC19Q6DKK2 380 aaPredicted RBP12.05□□□□□ -0.48
C9orf3-214ENST00000473778 APOBEC3HQ6NTF7 200 aaKnown RBP12.05□□□□□ -0.48
C9orf3-214ENST00000473778 SLF2Q8IX21 1173 aa12.05□□□□□ -0.48
C9orf3-214ENST00000473778 ZC3H3Q8IXZ2 948 aaKnown RBP12.05□□□□□ -0.48
C9orf3-214ENST00000473778 CRYGNQ8WXF5 182 aa12.05□□□□□ -0.48
C9orf3-214ENST00000473778 MYCBPQ99417 103 aaPredicted RBP12.05□□□□□ -0.48
C9orf3-214ENST00000473778 EDEM3Q9BZQ6 932 aa12.05□□□□□ -0.48
C9orf3-214ENST00000473778 KCNQ5Q9NR82 932 aa12.05□□□□□ -0.48
C9orf3-214ENST00000473778 USP40Q9NVE5 1235 aa12.05□□□□□ -0.48
C9orf3-214ENST00000473778 GOLGA6AQ9NYA3 693 aa12.05□□□□□ -0.48
C9orf3-214ENST00000473778 AJAP1Q9UKB5 411 aaPredicted RBP12.05□□□□□ -0.48
C9orf3-214ENST00000473778 ANKRD31Q8N7Z5 1873 aa12.04□□□□□ -0.48
C9orf3-214ENST00000473778 GRID2IPA4D2P6 1211 aa12.04□□□□□ -0.48
C9orf3-214ENST00000473778 RAD21O60216 631 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms