RNA–Protein interactions for RNA: ENST00000473598.6

LMNA-213, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 2,015 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-213ENST00000473598 HTTP42858 3142 aa16.53■□□□□ 0.24
LMNA-213ENST00000473598 ERICH4A6NGS2 130 aa16.53■□□□□ 0.24
LMNA-213ENST00000473598 NOP2P46087 812 aaKnown RBP16.53■□□□□ 0.24
LMNA-213ENST00000473598 CCNA1P78396 465 aa16.53■□□□□ 0.24
LMNA-213ENST00000473598 PLCB2Q00722 1185 aa16.53■□□□□ 0.24
LMNA-213ENST00000473598 CNTN2Q02246 1040 aa16.53■□□□□ 0.24
LMNA-213ENST00000473598 POSTNQ15063 836 aa16.53■□□□□ 0.24
LMNA-213ENST00000473598 NAALADL2Q58DX5 795 aa16.53■□□□□ 0.24
LMNA-213ENST00000473598 SH3RF1Q7Z6J0 888 aa16.53■□□□□ 0.24
LMNA-213ENST00000473598 SNX29Q8TEQ0 813 aa16.53■□□□□ 0.24
LMNA-213ENST00000473598 ZNF577Q9BSK1 485 aa16.53■□□□□ 0.24
LMNA-213ENST00000473598 KCNH7Q9NS40 1196 aa16.53■□□□□ 0.24
LMNA-213ENST00000473598 VAV3Q9UKW4 847 aa16.53■□□□□ 0.24
LMNA-213ENST00000473598 PLXNA1Q9UIW2 1896 aa16.52■□□□□ 0.24
LMNA-213ENST00000473598 GPR25O00155 361 aa16.52■□□□□ 0.24
LMNA-213ENST00000473598 PSMD10O75832 226 aa16.52■□□□□ 0.24
LMNA-213ENST00000473598 CAP1Q01518 475 aa16.52■□□□□ 0.24
LMNA-213ENST00000473598 RAD51AP2Q09MP3 1159 aa16.52■□□□□ 0.24
LMNA-213ENST00000473598 ZRSR1Q15695 479 aaKnown RBP16.52■□□□□ 0.24
LMNA-213ENST00000473598 LRCH2Q5VUJ6 765 aa16.52■□□□□ 0.24
LMNA-213ENST00000473598 C17orf99Q6UX52 265 aa16.52■□□□□ 0.24
LMNA-213ENST00000473598 PAGE5Q96GU1 130 aa16.52■□□□□ 0.24
LMNA-213ENST00000473598 IWS1Q96ST2 819 aa16.52■□□□□ 0.24
LMNA-213ENST00000473598 PORCNQ9H237 461 aa16.52■□□□□ 0.24
LMNA-213ENST00000473598 RASSF4Q9H2L5 321 aa16.52■□□□□ 0.24
LMNA-213ENST00000473598 TUBE1Q9UJT0 475 aa16.52■□□□□ 0.24
LMNA-213ENST00000473598 PAXBP1Q9Y5B6 917 aa16.52■□□□□ 0.24
LMNA-213ENST00000473598 LRRC37A2A6NM11 1700 aa16.52■□□□□ 0.24
LMNA-213ENST00000473598 ASTN1O14525 1302 aa16.52■□□□□ 0.23
LMNA-213ENST00000473598 GOLGA6L6A8MZA4 724 aa16.52■□□□□ 0.23
LMNA-213ENST00000473598 POTEB2H3BUK9 544 aa16.52■□□□□ 0.23
LMNA-213ENST00000473598 IPO5O00410 1097 aaKnown RBP16.52■□□□□ 0.23
LMNA-213ENST00000473598 PLCG1P19174 1290 aa16.52■□□□□ 0.23
LMNA-213ENST00000473598 GRB10Q13322 594 aa16.52■□□□□ 0.23
LMNA-213ENST00000473598 MTMR1Q13613 665 aa16.52■□□□□ 0.23
LMNA-213ENST00000473598 KCTD2Q14681 263 aa16.52■□□□□ 0.23
LMNA-213ENST00000473598 OTOP1Q7RTM1 612 aa16.52■□□□□ 0.23
LMNA-213ENST00000473598 GRAMD1CQ8IYS0 662 aa16.52■□□□□ 0.23
LMNA-213ENST00000473598 FAM133AQ8N9E0 248 aa16.52■□□□□ 0.23
LMNA-213ENST00000473598 ZNF296Q8WUU4 475 aaPredicted RBP16.52■□□□□ 0.23
LMNA-213ENST00000473598 PLIN2Q99541 437 aa16.52■□□□□ 0.23
LMNA-213ENST00000473598 MMP19Q99542 508 aa16.52■□□□□ 0.23
LMNA-213ENST00000473598 NUDT12Q9BQG2 462 aa16.52■□□□□ 0.23
LMNA-213ENST00000473598 CUEDC2Q9H467 287 aa16.52■□□□□ 0.23
LMNA-213ENST00000473598 SLC26A4O43511 780 aa16.51■□□□□ 0.23
LMNA-213ENST00000473598 STAM2O75886 525 aa16.51■□□□□ 0.23
LMNA-213ENST00000473598 PRR29P0C7W0 189 aa16.51■□□□□ 0.23
LMNA-213ENST00000473598 ALDH5A1P51649 535 aaPredicted RBP16.51■□□□□ 0.23
LMNA-213ENST00000473598 HNRNPH2P55795 449 aaKnown RBP16.51■□□□□ 0.23
LMNA-213ENST00000473598 PPP2R5CQ13362 524 aa16.51■□□□□ 0.23
LMNA-213ENST00000473598 IQCB1Q15051 598 aa16.51■□□□□ 0.23
LMNA-213ENST00000473598 NCAPH2Q6IBW4 605 aa16.51■□□□□ 0.23
LMNA-213ENST00000473598 PNMA5Q96PV4 448 aa16.51■□□□□ 0.23
LMNA-213ENST00000473598 RIT2Q99578 217 aa16.51■□□□□ 0.23
LMNA-213ENST00000473598 AGO4Q9HCK5 861 aaKnown RBP16.51■□□□□ 0.23
LMNA-213ENST00000473598 ANO10Q9NW15 660 aa16.51■□□□□ 0.23
LMNA-213ENST00000473598 ADD3Q9UEY8 706 aaKnown RBP16.51■□□□□ 0.23
LMNA-213ENST00000473598 STK24Q9Y6E0 443 aa16.51■□□□□ 0.23
LMNA-213ENST00000473598 CASP8AP2Q9UKL3 1982 aa16.51■□□□□ 0.23
LMNA-213ENST00000473598 ZSWIM8A7E2V4 1837 aa16.5■□□□□ 0.23
LMNA-213ENST00000473598 KDM3AQ9Y4C1 1321 aa16.5■□□□□ 0.23
LMNA-213ENST00000473598 SOWAHBA6NEL2 793 aa16.5■□□□□ 0.23
LMNA-213ENST00000473598 GAS7O60861 476 aa16.5■□□□□ 0.23
LMNA-213ENST00000473598 FCER1AP12319 257 aa16.5■□□□□ 0.23
LMNA-213ENST00000473598 AFMP43652 599 aa16.5■□□□□ 0.23
LMNA-213ENST00000473598 CTCFP49711 727 aaPredicted RBP16.5■□□□□ 0.23
LMNA-213ENST00000473598 HYIQ5T013 277 aa16.5■□□□□ 0.23
LMNA-213ENST00000473598 WDR78Q5VTH9 848 aa16.5■□□□□ 0.23
LMNA-213ENST00000473598 C11orf57Q6ZUT1 292 aaPredicted RBP16.5■□□□□ 0.23
LMNA-213ENST00000473598 LRRC15Q8TF66 581 aa16.5■□□□□ 0.23
LMNA-213ENST00000473598 CDK5RAP3Q96JB5 506 aa16.5■□□□□ 0.23
LMNA-213ENST00000473598 INPP4AQ96PE3 977 aaPredicted RBP16.5■□□□□ 0.23
LMNA-213ENST00000473598 MYCBPQ99417 103 aaPredicted RBP16.5■□□□□ 0.23
LMNA-213ENST00000473598 PCDHA5Q9Y5H7 936 aa16.5■□□□□ 0.23
LMNA-213ENST00000473598 DNAJC25-GNG10A0A024R161 153 aa16.5■□□□□ 0.23
LMNA-213ENST00000473598 MAFGO15525 162 aa16.5■□□□□ 0.23
LMNA-213ENST00000473598 CCT6AP40227 531 aaKnown RBP16.5■□□□□ 0.23
LMNA-213ENST00000473598 FAM110CQ1W6H9 321 aa16.5■□□□□ 0.23
LMNA-213ENST00000473598 TMEM119Q4V9L6 283 aa16.5■□□□□ 0.23
LMNA-213ENST00000473598 HAUS3Q68CZ6 603 aa16.5■□□□□ 0.23
LMNA-213ENST00000473598 NLRX1Q86UT6 975 aa16.5■□□□□ 0.23
LMNA-213ENST00000473598 ERMNQ8TAM6 284 aa16.5■□□□□ 0.23
LMNA-213ENST00000473598 GPRASP2Q96D09 838 aa16.5■□□□□ 0.23
LMNA-213ENST00000473598 MTRQ99707 1265 aa16.5■□□□□ 0.23
LMNA-213ENST00000473598 TEKT3Q9BXF9 490 aa16.5■□□□□ 0.23
LMNA-213ENST00000473598 ARHGAP39Q9C0H5 1083 aa16.5■□□□□ 0.23
LMNA-213ENST00000473598 MAGEF1Q9HAY2 307 aa16.5■□□□□ 0.23
LMNA-213ENST00000473598 DOCK5Q9H7D0 1870 aa16.49■□□□□ 0.23
LMNA-213ENST00000473598 GTF2A1P52655 376 aaPredicted RBP16.49■□□□□ 0.23
LMNA-213ENST00000473598 ECM1Q16610 540 aa16.49■□□□□ 0.23
LMNA-213ENST00000473598 NT5DC1Q5TFE4 455 aa16.49■□□□□ 0.23
LMNA-213ENST00000473598 B3GNT9Q6UX72 402 aa16.49■□□□□ 0.23
LMNA-213ENST00000473598 SPATA20Q8TB22 786 aa16.49■□□□□ 0.23
LMNA-213ENST00000473598 STAMQ92783 540 aa16.49■□□□□ 0.23
LMNA-213ENST00000473598 NT5C3AQ9H0P0 336 aa16.49■□□□□ 0.23
LMNA-213ENST00000473598 KBTBD4Q9NVX7 518 aa16.49■□□□□ 0.23
LMNA-213ENST00000473598 STK17AQ9UEE5 414 aa16.49■□□□□ 0.23
LMNA-213ENST00000473598 RSPH14Q9UHP6 348 aa16.49■□□□□ 0.23
LMNA-213ENST00000473598 DHX15O43143 795 aaKnown RBP16.48■□□□□ 0.23
LMNA-213ENST00000473598 RGS20O76081 388 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms