RNA–Protein interactions for RNA: ENST00000473522.1

RPUSD3-214, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-214ENST00000473522 CCNE2O96020 404 aa20.07■□□□□ 0.8
RPUSD3-214ENST00000473522 MDM2Q00987 491 aaPredicted RBP20.07■□□□□ 0.8
RPUSD3-214ENST00000473522 SP4Q02446 784 aa20.07■□□□□ 0.8
RPUSD3-214ENST00000473522 NR5A1Q13285 461 aa20.07■□□□□ 0.8
RPUSD3-214ENST00000473522 FAM47CQ5HY64 1035 aa20.07■□□□□ 0.8
RPUSD3-214ENST00000473522 GDF6Q6KF10 455 aaPredicted RBP20.07■□□□□ 0.8
RPUSD3-214ENST00000473522 MFSD5Q6N075 450 aa20.07■□□□□ 0.8
RPUSD3-214ENST00000473522 ABHD15Q6UXT9 468 aa20.07■□□□□ 0.8
RPUSD3-214ENST00000473522 PIK3AP1Q6ZUJ8 805 aa20.07■□□□□ 0.8
RPUSD3-214ENST00000473522 DIS3L2Q8IYB7 885 aaKnown RBP20.07■□□□□ 0.8
RPUSD3-214ENST00000473522 PPP1R13LQ8WUF5 828 aa20.07■□□□□ 0.8
RPUSD3-214ENST00000473522 SLC5A5Q92911 643 aa20.07■□□□□ 0.8
RPUSD3-214ENST00000473522 PCYT2Q99447 389 aa20.07■□□□□ 0.8
RPUSD3-214ENST00000473522 RIT2Q99578 217 aa20.07■□□□□ 0.8
RPUSD3-214ENST00000473522 SMARCAD1Q9H4L7 1026 aa20.07■□□□□ 0.8
RPUSD3-214ENST00000473522 A0A1W2PPC1 479 aa20.06■□□□□ 0.8
RPUSD3-214ENST00000473522 UTP14CQ5TAP6 766 aaKnown RBP20.06■□□□□ 0.8
RPUSD3-214ENST00000473522 PLPPR4Q7Z2D5 763 aa20.06■□□□□ 0.8
RPUSD3-214ENST00000473522 NEK8Q86SG6 692 aa20.06■□□□□ 0.8
RPUSD3-214ENST00000473522 FAM184AQ8NB25 1140 aa20.06■□□□□ 0.8
RPUSD3-214ENST00000473522 C8orf76Q96K31 380 aa20.06■□□□□ 0.8
RPUSD3-214ENST00000473522 NOC4LQ9BVI4 516 aaKnown RBP20.06■□□□□ 0.8
RPUSD3-214ENST00000473522 RNPEPQ9H4A4 650 aa20.06■□□□□ 0.8
RPUSD3-214ENST00000473522 PCDH10Q9P2E7 1040 aa20.06■□□□□ 0.8
RPUSD3-214ENST00000473522 ZNF215Q9UL58 517 aaPredicted RBP20.06■□□□□ 0.8
RPUSD3-214ENST00000473522 RANBP2P49792 3224 aaKnown RBP20.06■□□□□ 0.8
RPUSD3-214ENST00000473522 EMSYQ7Z589 1322 aa20.05■□□□□ 0.8
RPUSD3-214ENST00000473522 TDP2O95551 362 aa20.05■□□□□ 0.8
RPUSD3-214ENST00000473522 GCFC2P16383 781 aaKnown RBP20.05■□□□□ 0.8
RPUSD3-214ENST00000473522 CHMP4BP1P59074 171 aa20.05■□□□□ 0.8
RPUSD3-214ENST00000473522 HIC1Q14526 733 aa20.05■□□□□ 0.8
RPUSD3-214ENST00000473522 PTGISQ16647 500 aa20.05■□□□□ 0.8
RPUSD3-214ENST00000473522 ZNF746Q6NUN9 644 aaPredicted RBP20.05■□□□□ 0.8
RPUSD3-214ENST00000473522 NAP1L4Q99733 375 aaKnown RBP20.05■□□□□ 0.8
RPUSD3-214ENST00000473522 HIPK3Q9H422 1215 aa20.05■□□□□ 0.8
RPUSD3-214ENST00000473522 ERAP1Q9NZ08 941 aa20.05■□□□□ 0.8
RPUSD3-214ENST00000473522 PSMD10O75832 226 aa20.04■□□□□ 0.8
RPUSD3-214ENST00000473522 CYP2C9P11712 490 aa20.04■□□□□ 0.8
RPUSD3-214ENST00000473522 ADAM17P78536 824 aa20.04■□□□□ 0.8
RPUSD3-214ENST00000473522 KRT76Q01546 638 aa20.04■□□□□ 0.8
RPUSD3-214ENST00000473522 CUL4AQ13619 759 aa20.04■□□□□ 0.8
RPUSD3-214ENST00000473522 SAFBQ15424 915 aaKnown RBP eCLIP20.04■□□□□ 0.8
RPUSD3-214ENST00000473522 LETM2Q2VYF4 491 aa20.04■□□□□ 0.8
RPUSD3-214ENST00000473522 B3GNT9Q6UX72 402 aa20.04■□□□□ 0.8
RPUSD3-214ENST00000473522 TRIM50Q86XT4 487 aa20.04■□□□□ 0.8
RPUSD3-214ENST00000473522 ETNPPLQ8TBG4 499 aa20.04■□□□□ 0.8
RPUSD3-214ENST00000473522 AFAP1L1Q8TED9 768 aa20.04■□□□□ 0.8
RPUSD3-214ENST00000473522 FOXP1Q9H334 677 aaPredicted RBP20.04■□□□□ 0.8
RPUSD3-214ENST00000473522 DDX25Q9UHL0 483 aaKnown RBP20.04■□□□□ 0.8
RPUSD3-214ENST00000473522 KIAA1217Q5T5P2 1943 aa20.04■□□□□ 0.8
RPUSD3-214ENST00000473522 SMIM10L2AP0DMW4 78 aa20.03■□□□□ 0.8
RPUSD3-214ENST00000473522 SMIM10L2BP0DMW5 78 aa20.03■□□□□ 0.8
RPUSD3-214ENST00000473522 SLC26A2P50443 739 aa20.03■□□□□ 0.8
RPUSD3-214ENST00000473522 STAT5BP51692 787 aa20.03■□□□□ 0.8
RPUSD3-214ENST00000473522 RBL2Q08999 1139 aa20.03■□□□□ 0.8
RPUSD3-214ENST00000473522 PTK7Q13308 1070 aa20.03■□□□□ 0.8
RPUSD3-214ENST00000473522 HABP4Q5JVS0 413 aaKnown RBP20.03■□□□□ 0.8
RPUSD3-214ENST00000473522 SMAP1Q8IYB5 467 aaPredicted RBP20.03■□□□□ 0.8
RPUSD3-214ENST00000473522 GLG1Q92896 1179 aa20.03■□□□□ 0.8
RPUSD3-214ENST00000473522 FAM20AQ96MK3 541 aa20.03■□□□□ 0.8
RPUSD3-214ENST00000473522 UBE2OQ9C0C9 1292 aaKnown RBP20.03■□□□□ 0.8
RPUSD3-214ENST00000473522 AZI2Q9H6S1 392 aa20.03■□□□□ 0.8
RPUSD3-214ENST00000473522 KCNMB3Q9NPA1 279 aa20.03■□□□□ 0.8
RPUSD3-214ENST00000473522 NRCAMQ92823 1304 aa20.02■□□□□ 0.8
RPUSD3-214ENST00000473522 ALPK3Q96L96 1907 aa20.02■□□□□ 0.8
RPUSD3-214ENST00000473522 C17orf102A2RUQ5 167 aa20.02■□□□□ 0.8
RPUSD3-214ENST00000473522 FAM205CA6NFA0 338 aa20.02■□□□□ 0.8
RPUSD3-214ENST00000473522 PITPNM1O00562 1244 aa20.02■□□□□ 0.8
RPUSD3-214ENST00000473522 TBX3O15119 743 aa20.02■□□□□ 0.8
RPUSD3-214ENST00000473522 GNAT1P11488 350 aa20.02■□□□□ 0.8
RPUSD3-214ENST00000473522 CYP2C18P33260 490 aa20.02■□□□□ 0.8
RPUSD3-214ENST00000473522 ZNF200P98182 395 aaPredicted RBP20.02■□□□□ 0.8
RPUSD3-214ENST00000473522 GUCY1B3Q02153 619 aa20.02■□□□□ 0.8
RPUSD3-214ENST00000473522 MIS18BP1Q6P0N0 1132 aa20.02■□□□□ 0.8
RPUSD3-214ENST00000473522 TMEM199Q8N511 208 aa20.02■□□□□ 0.8
RPUSD3-214ENST00000473522 UIMC1Q96RL1 719 aa20.02■□□□□ 0.8
RPUSD3-214ENST00000473522 NOD1Q9Y239 953 aa20.02■□□□□ 0.8
RPUSD3-214ENST00000473522 KIF3AQ9Y496 699 aa20.02■□□□□ 0.8
RPUSD3-214ENST00000473522 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.02■□□□□ 0.8
RPUSD3-214ENST00000473522 PCDHA10Q9Y5I2 948 aa20.02■□□□□ 0.8
RPUSD3-214ENST00000473522 MAFBQ9Y5Q3 323 aaPredicted RBP20.02■□□□□ 0.8
RPUSD3-214ENST00000473522 UMODL1Q5DID0 1318 aa20.02■□□□□ 0.79
RPUSD3-214ENST00000473522 SCN10AQ9Y5Y9 1956 aa20.01■□□□□ 0.79
RPUSD3-214ENST00000473522 DDX39AO00148 427 aaKnown RBP20.01■□□□□ 0.79
RPUSD3-214ENST00000473522 SLC37A4O43826 429 aa20.01■□□□□ 0.79
RPUSD3-214ENST00000473522 CCNT1O60563 726 aaKnown RBP20.01■□□□□ 0.79
RPUSD3-214ENST00000473522 EPHB4P54760 987 aa20.01■□□□□ 0.79
RPUSD3-214ENST00000473522 FPGSQ05932 587 aa20.01■□□□□ 0.79
RPUSD3-214ENST00000473522 BFSP2Q13515 415 aa20.01■□□□□ 0.79
RPUSD3-214ENST00000473522 C16orf59Q7L2K0 433 aa20.01■□□□□ 0.79
RPUSD3-214ENST00000473522 SERINC5Q86VE9 423 aa20.01■□□□□ 0.79
RPUSD3-214ENST00000473522 CAGE1Q8TC20 777 aa20.01■□□□□ 0.79
RPUSD3-214ENST00000473522 DHX38Q92620 1227 aaKnown RBP20.01■□□□□ 0.79
RPUSD3-214ENST00000473522 TNPO1Q92973 898 aaKnown RBP20.01■□□□□ 0.79
RPUSD3-214ENST00000473522 PPP1R12CQ9BZL4 782 aa20.01■□□□□ 0.79
RPUSD3-214ENST00000473522 WNT8AQ9H1J5 351 aa20.01■□□□□ 0.79
RPUSD3-214ENST00000473522 SETD4Q9NVD3 440 aa20.01■□□□□ 0.79
RPUSD3-214ENST00000473522 GAS7O60861 476 aa20■□□□□ 0.79
RPUSD3-214ENST00000473522 CSF2RAP15509 400 aa20■□□□□ 0.79
RPUSD3-214ENST00000473522 U2AF2P26368 475 aaKnown RBP eCLIP20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms