RNA–Protein interactions for RNA: ENST00000473345.5

MCF2L-223, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-223ENST00000473345 DSCC1Q9BVC3 393 aa11.17□□□□□ -0.62
MCF2L-223ENST00000473345 EHMT1Q9H9B1 1298 aa11.17□□□□□ -0.62
MCF2L-223ENST00000473345 AGO3Q9H9G7 860 aaKnown RBP11.17□□□□□ -0.62
MCF2L-223ENST00000473345 MLXIPQ9HAP2 919 aa11.17□□□□□ -0.62
MCF2L-223ENST00000473345 MYH6P13533 1939 aa11.16□□□□□ -0.62
MCF2L-223ENST00000473345 C5orf67F2Z3F1 127 aa11.16□□□□□ -0.62
MCF2L-223ENST00000473345 ENPP3O14638 875 aa11.16□□□□□ -0.62
MCF2L-223ENST00000473345 TGFB3P10600 412 aa11.16□□□□□ -0.62
MCF2L-223ENST00000473345 CCND2P30279 289 aa11.16□□□□□ -0.62
MCF2L-223ENST00000473345 CTNNB1P35222 781 aa11.16□□□□□ -0.62
MCF2L-223ENST00000473345 BMPR1AP36894 532 aa11.16□□□□□ -0.62
MCF2L-223ENST00000473345 ANTXR2P58335 489 aa11.16□□□□□ -0.62
MCF2L-223ENST00000473345 SP4Q02446 784 aa11.16□□□□□ -0.62
MCF2L-223ENST00000473345 PTH1RQ03431 593 aa11.16□□□□□ -0.62
MCF2L-223ENST00000473345 SMAD2Q15796 467 aaKnown RBP11.16□□□□□ -0.62
MCF2L-223ENST00000473345 UTP14CQ5TAP6 766 aaKnown RBP11.16□□□□□ -0.62
MCF2L-223ENST00000473345 USP17L6PQ6QN14 398 aa11.16□□□□□ -0.62
MCF2L-223ENST00000473345 PIBF1Q8WXW3 757 aa11.16□□□□□ -0.62
MCF2L-223ENST00000473345 MSLNLQ96KJ4 702 aa11.16□□□□□ -0.62
MCF2L-223ENST00000473345 OSBPL3Q9H4L5 887 aa11.16□□□□□ -0.62
MCF2L-223ENST00000473345 ZNF318Q5VUA4 2279 aa11.15□□□□□ -0.62
MCF2L-223ENST00000473345 GSTTP1A0A1W2PQM5 241 aa11.15□□□□□ -0.62
MCF2L-223ENST00000473345 GCOM1H8Y6P7 765 aaPredicted RBP11.15□□□□□ -0.62
MCF2L-223ENST00000473345 GLP2RO95838 553 aa11.15□□□□□ -0.62
MCF2L-223ENST00000473345 POLR2MP0CAP2 368 aa11.15□□□□□ -0.62
MCF2L-223ENST00000473345 ALADP13716 330 aa11.15□□□□□ -0.62
MCF2L-223ENST00000473345 ARHGAP4P98171 946 aa11.15□□□□□ -0.62
MCF2L-223ENST00000473345 TROAPQ12815 778 aa11.15□□□□□ -0.62
MCF2L-223ENST00000473345 PTPROQ16827 1216 aa11.15□□□□□ -0.62
MCF2L-223ENST00000473345 IFIT1BQ5T764 474 aaKnown RBP11.15□□□□□ -0.62
MCF2L-223ENST00000473345 METTL7BQ6UX53 244 aa11.15□□□□□ -0.62
MCF2L-223ENST00000473345 TICAM2Q86XR7 235 aa11.15□□□□□ -0.62
MCF2L-223ENST00000473345 RNF135Q8IUD6 432 aa11.15□□□□□ -0.62
MCF2L-223ENST00000473345 CLP1Q92989 425 aaKnown RBP11.15□□□□□ -0.62
MCF2L-223ENST00000473345 IL17RAQ96F46 866 aa11.15□□□□□ -0.62
MCF2L-223ENST00000473345 SAMD11Q96NU1 681 aa11.15□□□□□ -0.62
MCF2L-223ENST00000473345 PCYT2Q99447 389 aa11.15□□□□□ -0.62
MCF2L-223ENST00000473345 CLEC1BQ9P126 229 aa11.15□□□□□ -0.62
MCF2L-223ENST00000473345 HCSTQ9UBK5 93 aa11.15□□□□□ -0.62
MCF2L-223ENST00000473345 MRPL42Q9Y6G3 142 aaKnown RBP11.15□□□□□ -0.62
MCF2L-223ENST00000473345 RALGAPA2Q2PPJ7 1873 aa11.15□□□□□ -0.63
MCF2L-223ENST00000473345 TECTAO75443 2155 aa11.14□□□□□ -0.63
MCF2L-223ENST00000473345 ADGRA3Q8IWK6 1321 aa11.14□□□□□ -0.63
MCF2L-223ENST00000473345 MEIS2O14770 477 aa11.14□□□□□ -0.63
MCF2L-223ENST00000473345 ITGB1P05556 798 aa11.14□□□□□ -0.63
MCF2L-223ENST00000473345 CYP21A2P08686 494 aa11.14□□□□□ -0.63
MCF2L-223ENST00000473345 GSPT1P15170 499 aaKnown RBP11.14□□□□□ -0.63
MCF2L-223ENST00000473345 MARK3P27448 753 aa11.14□□□□□ -0.63
MCF2L-223ENST00000473345 PDE4AP27815 886 aa11.14□□□□□ -0.63
MCF2L-223ENST00000473345 NUCB1Q02818 461 aa11.14□□□□□ -0.63
MCF2L-223ENST00000473345 ADAM15Q13444 863 aa11.14□□□□□ -0.63
MCF2L-223ENST00000473345 KCNV1Q6PIU1 500 aa11.14□□□□□ -0.63
MCF2L-223ENST00000473345 CHD1LQ86WJ1 897 aa11.14□□□□□ -0.63
MCF2L-223ENST00000473345 FIBCD1Q8N539 461 aa11.14□□□□□ -0.63
MCF2L-223ENST00000473345 VN1R2Q8NFZ6 395 aa11.14□□□□□ -0.63
MCF2L-223ENST00000473345 MYL10Q9BUA6 226 aa11.14□□□□□ -0.63
MCF2L-223ENST00000473345 IGFLR1Q9H665 355 aa11.14□□□□□ -0.63
MCF2L-223ENST00000473345 PRKAG3Q9UGI9 489 aa11.14□□□□□ -0.63
MCF2L-223ENST00000473345 CTNNA3Q9UI47 895 aa11.14□□□□□ -0.63
MCF2L-223ENST00000473345 PLAGL2Q9UPG8 496 aa11.14□□□□□ -0.63
MCF2L-223ENST00000473345 KIAA1671Q9BY89 1806 aa11.14□□□□□ -0.63
MCF2L-223ENST00000473345 BAZ2BQ9UIF8 2168 aaKnown RBP11.13□□□□□ -0.63
MCF2L-223ENST00000473345 CAND2O75155 1236 aa11.13□□□□□ -0.63
MCF2L-223ENST00000473345 DGKIO75912 1065 aa11.13□□□□□ -0.63
MCF2L-223ENST00000473345 KCNA2P16389 499 aa11.13□□□□□ -0.63
MCF2L-223ENST00000473345 ITGB5P18084 799 aa11.13□□□□□ -0.63
MCF2L-223ENST00000473345 IMMTQ16891 758 aaKnown RBP11.13□□□□□ -0.63
MCF2L-223ENST00000473345 PUS10Q3MIT2 529 aaKnown RBP11.13□□□□□ -0.63
MCF2L-223ENST00000473345 CCDC178Q5BJE1 867 aa11.13□□□□□ -0.63
MCF2L-223ENST00000473345 HERC4Q5GLZ8 1057 aaPredicted RBP11.13□□□□□ -0.63
MCF2L-223ENST00000473345 FBXO47Q5MNV8 452 aa11.13□□□□□ -0.63
MCF2L-223ENST00000473345 SPPL3Q8TCT6 385 aa11.13□□□□□ -0.63
MCF2L-223ENST00000473345 DNAJB3Q8WWF6 145 aa11.13□□□□□ -0.63
MCF2L-223ENST00000473345 UBAC1Q9BSL1 405 aa11.13□□□□□ -0.63
MCF2L-223ENST00000473345 USP26Q9BXU7 913 aa11.13□□□□□ -0.63
MCF2L-223ENST00000473345 KRT23Q9C075 422 aa11.13□□□□□ -0.63
MCF2L-223ENST00000473345 TMX1Q9H3N1 280 aa11.13□□□□□ -0.63
MCF2L-223ENST00000473345 MAP3K20Q9NYL2 800 aaKnown RBP11.13□□□□□ -0.63
MCF2L-223ENST00000473345 CDY2AQ9Y6F7 541 aa11.13□□□□□ -0.63
MCF2L-223ENST00000473345 PIEZO1Q92508 2521 aa11.13□□□□□ -0.63
MCF2L-223ENST00000473345 TRIOO75962 3097 aa11.12□□□□□ -0.63
MCF2L-223ENST00000473345 PNMA6FA0A0J9YX94 578 aa11.12□□□□□ -0.63
MCF2L-223ENST00000473345 MBLAC1A4D2B0 266 aaPredicted RBP11.12□□□□□ -0.63
MCF2L-223ENST00000473345 FIBPO43427 364 aa11.12□□□□□ -0.63
MCF2L-223ENST00000473345 MMP1P03956 469 aa11.12□□□□□ -0.63
MCF2L-223ENST00000473345 CD52P31358 61 aa11.12□□□□□ -0.63
MCF2L-223ENST00000473345 TCF7P36402 384 aaPredicted RBP11.12□□□□□ -0.63
MCF2L-223ENST00000473345 TCF15Q12870 199 aa11.12□□□□□ -0.63
MCF2L-223ENST00000473345 SMAD4Q13485 552 aaKnown RBP11.12□□□□□ -0.63
MCF2L-223ENST00000473345 CMTR1Q8N1G2 835 aaKnown RBP11.12□□□□□ -0.63
MCF2L-223ENST00000473345 IGDCC4Q8TDY8 1250 aa11.12□□□□□ -0.63
MCF2L-223ENST00000473345 TRAPPC12Q8WVT3 735 aa11.12□□□□□ -0.63
MCF2L-223ENST00000473345 APBB2Q92870 758 aa11.12□□□□□ -0.63
MCF2L-223ENST00000473345 DIAPH3Q9NSV4 1193 aa11.12□□□□□ -0.63
MCF2L-223ENST00000473345 PKD2L1Q9P0L9 805 aa11.12□□□□□ -0.63
MCF2L-223ENST00000473345 CDH22Q9UJ99 828 aa11.12□□□□□ -0.63
MCF2L-223ENST00000473345 BARX2Q9UMQ3 279 aaPredicted RBP11.12□□□□□ -0.63
MCF2L-223ENST00000473345 hCG_1642624A0A1W2PR95 340 aa11.11□□□□□ -0.63
MCF2L-223ENST00000473345 NOP56O00567 594 aaKnown RBP11.11□□□□□ -0.63
MCF2L-223ENST00000473345 MGEA5O60502 916 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms