RNA–Protein interactions for RNA: ENST00000472959.5

TOP3A-204, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-204ENST00000472959 PTPN11Q06124 597 aaPredicted RBP23.5■■□□□ 1.35
TOP3A-204ENST00000472959 BECN1Q14457 450 aa23.5■■□□□ 1.35
TOP3A-204ENST00000472959 NBPF20Q3BBV1 942 aa23.5■■□□□ 1.35
TOP3A-204ENST00000472959 TRIM60Q495X7 471 aa23.5■■□□□ 1.35
TOP3A-204ENST00000472959 SMAP1Q8IYB5 467 aaPredicted RBP23.5■■□□□ 1.35
TOP3A-204ENST00000472959 TEKT3Q9BXF9 490 aa23.5■■□□□ 1.35
TOP3A-204ENST00000472959 TUT1Q9H6E5 874 aaKnown RBP23.5■■□□□ 1.35
TOP3A-204ENST00000472959 ZNF215Q9UL58 517 aaPredicted RBP23.5■■□□□ 1.35
TOP3A-204ENST00000472959 ATP11BQ9Y2G3 1177 aa23.5■■□□□ 1.35
TOP3A-204ENST00000472959 NR2E3Q9Y5X4 410 aa23.5■■□□□ 1.35
TOP3A-204ENST00000472959 MKI67P46013 3256 aaKnown RBP23.5■■□□□ 1.35
TOP3A-204ENST00000472959 HAS3O00219 553 aa23.49■■□□□ 1.35
TOP3A-204ENST00000472959 MARCH6O60337 910 aa23.49■■□□□ 1.35
TOP3A-204ENST00000472959 PSMD10O75832 226 aa23.49■■□□□ 1.35
TOP3A-204ENST00000472959 BAG4O95429 457 aaKnown RBP23.49■■□□□ 1.35
TOP3A-204ENST00000472959 TLE2Q04725 743 aa23.49■■□□□ 1.35
TOP3A-204ENST00000472959 MFSD10Q14728 455 aa23.49■■□□□ 1.35
TOP3A-204ENST00000472959 UTP14CQ5TAP6 766 aaKnown RBP23.49■■□□□ 1.35
TOP3A-204ENST00000472959 MIS18BP1Q6P0N0 1132 aa23.49■■□□□ 1.35
TOP3A-204ENST00000472959 SLFN12Q8IYM2 578 aa23.49■■□□□ 1.35
TOP3A-204ENST00000472959 SMARCAD1Q9H4L7 1026 aa23.49■■□□□ 1.35
TOP3A-204ENST00000472959 VPS37CA5D8V6 355 aaPredicted RBP23.48■■□□□ 1.35
TOP3A-204ENST00000472959 DCDC2CA8MYV0 355 aa23.48■■□□□ 1.35
TOP3A-204ENST00000472959 NEMFO60524 1076 aa23.48■■□□□ 1.35
TOP3A-204ENST00000472959 LGR5O75473 907 aa23.48■■□□□ 1.35
TOP3A-204ENST00000472959 ATP2B1P20020 1258 aa23.48■■□□□ 1.35
TOP3A-204ENST00000472959 KIAA0753Q2KHM9 967 aa23.48■■□□□ 1.35
TOP3A-204ENST00000472959 TTC38Q5R3I4 469 aa23.48■■□□□ 1.35
TOP3A-204ENST00000472959 ABHD15Q6UXT9 468 aa23.48■■□□□ 1.35
TOP3A-204ENST00000472959 SESTD1Q86VW0 696 aa23.48■■□□□ 1.35
TOP3A-204ENST00000472959 POTEDQ86YR6 584 aa23.48■■□□□ 1.35
TOP3A-204ENST00000472959 AZI2Q9H6S1 392 aa23.48■■□□□ 1.35
TOP3A-204ENST00000472959 EMSYQ7Z589 1322 aa23.48■■□□□ 1.35
TOP3A-204ENST00000472959 WDR64B1ANS9 1081 aa23.47■■□□□ 1.35
TOP3A-204ENST00000472959 PQBP1O60828 265 aaKnown RBP23.47■■□□□ 1.35
TOP3A-204ENST00000472959 SFNP31947 248 aa23.47■■□□□ 1.35
TOP3A-204ENST00000472959 MCM7P33993 719 aa23.47■■□□□ 1.35
TOP3A-204ENST00000472959 CALCRLQ16602 461 aa23.47■■□□□ 1.35
TOP3A-204ENST00000472959 RILPL1Q5EBL4 403 aa23.47■■□□□ 1.35
TOP3A-204ENST00000472959 BRAPQ7Z569 592 aa23.47■■□□□ 1.35
TOP3A-204ENST00000472959 RDM1Q8NG50 284 aa23.47■■□□□ 1.35
TOP3A-204ENST00000472959 HAS1Q92839 578 aa23.47■■□□□ 1.35
TOP3A-204ENST00000472959 GLG1Q92896 1179 aa23.47■■□□□ 1.35
TOP3A-204ENST00000472959 ERAP1Q9NZ08 941 aa23.47■■□□□ 1.35
TOP3A-204ENST00000472959 PCDHA10Q9Y5I2 948 aa23.47■■□□□ 1.35
TOP3A-204ENST00000472959 IGKV6D-21A0A0A0MT36 114 aa23.46■■□□□ 1.35
TOP3A-204ENST00000472959 WNT7AO00755 349 aa23.46■■□□□ 1.35
TOP3A-204ENST00000472959 TLR3O15455 904 aaKnown RBP23.46■■□□□ 1.35
TOP3A-204ENST00000472959 SLC34A2O95436 690 aa23.46■■□□□ 1.35
TOP3A-204ENST00000472959 PSAPP07602 524 aa23.46■■□□□ 1.35
TOP3A-204ENST00000472959 SUPT20HL2P0C7V6 817 aa23.46■■□□□ 1.35
TOP3A-204ENST00000472959 JAK3P52333 1124 aa23.46■■□□□ 1.35
TOP3A-204ENST00000472959 CHMP4BP1P59074 171 aa23.46■■□□□ 1.35
TOP3A-204ENST00000472959 FAM47CQ5HY64 1035 aa23.46■■□□□ 1.35
TOP3A-204ENST00000472959 FAM160B1Q5W0V3 765 aa23.46■■□□□ 1.35
TOP3A-204ENST00000472959 PLPPR4Q7Z2D5 763 aa23.46■■□□□ 1.35
TOP3A-204ENST00000472959 TRIM50Q86XT4 487 aa23.46■■□□□ 1.35
TOP3A-204ENST00000472959 FAM126BQ8IXS8 530 aa23.46■■□□□ 1.35
TOP3A-204ENST00000472959 C7orf61Q8IZ16 206 aa23.46■■□□□ 1.35
TOP3A-204ENST00000472959 C7orf31Q8N865 590 aa23.46■■□□□ 1.35
TOP3A-204ENST00000472959 GJA10Q969M2 543 aa23.46■■□□□ 1.35
TOP3A-204ENST00000472959 STX6O43752 255 aa23.45■■□□□ 1.34
TOP3A-204ENST00000472959 SLC26A2P50443 739 aa23.45■■□□□ 1.34
TOP3A-204ENST00000472959 TOB1P50616 345 aaPredicted RBP23.45■■□□□ 1.34
TOP3A-204ENST00000472959 STAT5BP51692 787 aa23.45■■□□□ 1.34
TOP3A-204ENST00000472959 PPP2R5CQ13362 524 aa23.45■■□□□ 1.34
TOP3A-204ENST00000472959 ZNF174Q15697 407 aa23.45■■□□□ 1.34
TOP3A-204ENST00000472959 B3GNT9Q6UX72 402 aa23.45■■□□□ 1.34
TOP3A-204ENST00000472959 MTMR9Q96QG7 549 aa23.45■■□□□ 1.34
TOP3A-204ENST00000472959 PCYT2Q99447 389 aa23.45■■□□□ 1.34
TOP3A-204ENST00000472959 UNC45AQ9H3U1 944 aa23.45■■□□□ 1.34
TOP3A-204ENST00000472959 DISC1Q9NRI5 854 aa23.45■■□□□ 1.34
TOP3A-204ENST00000472959 SAMM50Q9Y512 469 aa23.45■■□□□ 1.34
TOP3A-204ENST00000472959 SCN10AQ9Y5Y9 1956 aa23.44■■□□□ 1.34
TOP3A-204ENST00000472959 BACH1O14867 736 aa23.44■■□□□ 1.34
TOP3A-204ENST00000472959 CLTBP09497 229 aa23.44■■□□□ 1.34
TOP3A-204ENST00000472959 AFAP1L1Q8TED9 768 aa23.44■■□□□ 1.34
TOP3A-204ENST00000472959 TNPO1Q92973 898 aaKnown RBP23.44■■□□□ 1.34
TOP3A-204ENST00000472959 VAV3Q9UKW4 847 aa23.44■■□□□ 1.34
TOP3A-204ENST00000472959 MTMR6Q9Y217 621 aa23.44■■□□□ 1.34
TOP3A-204ENST00000472959 CHMP2AO43633 222 aa23.43■■□□□ 1.34
TOP3A-204ENST00000472959 CD4P01730 458 aa23.43■■□□□ 1.34
TOP3A-204ENST00000472959 FAAP100Q0VG06 881 aa23.43■■□□□ 1.34
TOP3A-204ENST00000472959 SWSAP1Q6NVH7 229 aa23.43■■□□□ 1.34
TOP3A-204ENST00000472959 MIER3Q7Z3K6 550 aa23.43■■□□□ 1.34
TOP3A-204ENST00000472959 ZNF302Q9NR11 478 aa23.43■■□□□ 1.34
TOP3A-204ENST00000472959 HDAC6Q9UBN7 1215 aa23.43■■□□□ 1.34
TOP3A-204ENST00000472959 PRKAG2Q9UGJ0 569 aa23.43■■□□□ 1.34
TOP3A-204ENST00000472959 GTF2IRD1Q9UHL9 959 aa23.43■■□□□ 1.34
TOP3A-204ENST00000472959 PCDHA12Q9UN75 941 aa23.43■■□□□ 1.34
TOP3A-204ENST00000472959 B4GALT4O60513 344 aa23.42■■□□□ 1.34
TOP3A-204ENST00000472959 CCDC60Q8IWA6 550 aaPredicted RBP23.42■■□□□ 1.34
TOP3A-204ENST00000472959 SPRYD3Q8NCJ5 442 aa23.42■■□□□ 1.34
TOP3A-204ENST00000472959 TRPV6Q9H1D0 765 aa23.42■■□□□ 1.34
TOP3A-204ENST00000472959 TMEM60Q9H2L4 133 aa23.42■■□□□ 1.34
TOP3A-204ENST00000472959 RNPEPQ9H4A4 650 aa23.42■■□□□ 1.34
TOP3A-204ENST00000472959 TMEM39AQ9NV64 488 aa23.42■■□□□ 1.34
TOP3A-204ENST00000472959 MAFBQ9Y5Q3 323 aaPredicted RBP23.42■■□□□ 1.34
TOP3A-204ENST00000472959 LAD1O00515 517 aa23.41■■□□□ 1.34
TOP3A-204ENST00000472959 OR52Z1P0C646 297 aa23.41■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms