RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 TJAP1Q5JTD0 557 aa17.53■□□□□ 0.4
VTI1A-203ENST00000472892 TYW1BQ6NUM6 668 aa17.53■□□□□ 0.4
VTI1A-203ENST00000472892 TMCO2Q7Z6W1 182 aaPredicted RBP17.53■□□□□ 0.4
VTI1A-203ENST00000472892 DBF4BQ8NFT6 615 aa17.53■□□□□ 0.4
VTI1A-203ENST00000472892 ATXN2LQ8WWM7 1075 aaKnown RBP17.53■□□□□ 0.4
VTI1A-203ENST00000472892 SEPT1Q8WYJ6 367 aa17.53■□□□□ 0.4
VTI1A-203ENST00000472892 CERS4Q9HA82 394 aa17.53■□□□□ 0.4
VTI1A-203ENST00000472892 RIC8AQ9NPQ8 531 aa17.53■□□□□ 0.4
VTI1A-203ENST00000472892 NRCAMQ92823 1304 aa17.52■□□□□ 0.4
VTI1A-203ENST00000472892 GSTTP1A0A1W2PQM5 241 aa17.52■□□□□ 0.4
VTI1A-203ENST00000472892 EPOPA6NHQ4 379 aa17.52■□□□□ 0.4
VTI1A-203ENST00000472892 GJB5O95377 273 aa17.52■□□□□ 0.4
VTI1A-203ENST00000472892 TCF7P36402 384 aaPredicted RBP17.52■□□□□ 0.4
VTI1A-203ENST00000472892 PLEKHG4Q58EX7 1191 aa17.52■□□□□ 0.4
VTI1A-203ENST00000472892 PPP1R18Q6NYC8 613 aa17.52■□□□□ 0.4
VTI1A-203ENST00000472892 RAD9AQ99638 391 aa17.52■□□□□ 0.4
VTI1A-203ENST00000472892 ZBED2Q9BTP6 218 aa17.52■□□□□ 0.4
VTI1A-203ENST00000472892 EHMT1Q9H9B1 1298 aa17.52■□□□□ 0.4
VTI1A-203ENST00000472892 MTCH2Q9Y6C9 303 aa17.52■□□□□ 0.4
VTI1A-203ENST00000472892 KLF18A0A0U1RQI7 1052 aa17.51■□□□□ 0.39
VTI1A-203ENST00000472892 LCHNA4D1U4 455 aa17.51■□□□□ 0.39
VTI1A-203ENST00000472892 GOLGA8AA7E2F4 631 aa17.51■□□□□ 0.39
VTI1A-203ENST00000472892 GOLGA8BA8MQT2 603 aa17.51■□□□□ 0.39
VTI1A-203ENST00000472892 RBAK-RBAKDNI3L0D1 243 aa17.51■□□□□ 0.39
VTI1A-203ENST00000472892 hCG_1984214I3L0E3 225 aa17.51■□□□□ 0.39
VTI1A-203ENST00000472892 FOSP01100 380 aaPredicted RBP17.51■□□□□ 0.39
VTI1A-203ENST00000472892 CDC27P30260 824 aa17.51■□□□□ 0.39
VTI1A-203ENST00000472892 NAPAP54920 295 aa17.51■□□□□ 0.39
VTI1A-203ENST00000472892 FAM26DQ5JW98 314 aa17.51■□□□□ 0.39
VTI1A-203ENST00000472892 ZNF713Q8N859 430 aaPredicted RBP17.51■□□□□ 0.39
VTI1A-203ENST00000472892 LMBR1Q8WVP7 490 aa17.51■□□□□ 0.39
VTI1A-203ENST00000472892 ARNTL2Q8WYA1 636 aa17.51■□□□□ 0.39
VTI1A-203ENST00000472892 MXRA8Q9BRK3 442 aa17.51■□□□□ 0.39
VTI1A-203ENST00000472892 THEGQ9P2T0 379 aa17.51■□□□□ 0.39
VTI1A-203ENST00000472892 SMCO2A6NFE2 343 aa17.5■□□□□ 0.39
VTI1A-203ENST00000472892 STXBP3O00186 592 aa17.5■□□□□ 0.39
VTI1A-203ENST00000472892 HSPA4P34932 840 aa17.5■□□□□ 0.39
VTI1A-203ENST00000472892 ARHGAP4P98171 946 aa17.5■□□□□ 0.39
VTI1A-203ENST00000472892 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.5■□□□□ 0.39
VTI1A-203ENST00000472892 RPAINQ86UA6 219 aa17.5■□□□□ 0.39
VTI1A-203ENST00000472892 FBXL16Q8N461 479 aa17.5■□□□□ 0.39
VTI1A-203ENST00000472892 CYP2W1Q8TAV3 490 aa17.5■□□□□ 0.39
VTI1A-203ENST00000472892 CCDC136Q96JN2 1154 aa17.5■□□□□ 0.39
VTI1A-203ENST00000472892 ASB2Q96Q27 587 aa17.5■□□□□ 0.39
VTI1A-203ENST00000472892 OSBPL7Q9BZF2 842 aa17.5■□□□□ 0.39
VTI1A-203ENST00000472892 KCNH7Q9NS40 1196 aa17.5■□□□□ 0.39
VTI1A-203ENST00000472892 BARHL2Q9NY43 387 aa17.5■□□□□ 0.39
VTI1A-203ENST00000472892 ERAP1Q9NZ08 941 aa17.5■□□□□ 0.39
VTI1A-203ENST00000472892 DOCK5Q9H7D0 1870 aa17.5■□□□□ 0.39
VTI1A-203ENST00000472892 PTPRSQ13332 1948 aa17.49■□□□□ 0.39
VTI1A-203ENST00000472892 GTPBP6O43824 516 aaPredicted RBP17.49■□□□□ 0.39
VTI1A-203ENST00000472892 CPA1P15085 419 aa17.49■□□□□ 0.39
VTI1A-203ENST00000472892 ADD1P35611 737 aaKnown RBP17.49■□□□□ 0.39
VTI1A-203ENST00000472892 CLK2P49760 499 aaKnown RBP17.49■□□□□ 0.39
VTI1A-203ENST00000472892 ADCY7P51828 1080 aa17.49■□□□□ 0.39
VTI1A-203ENST00000472892 SPRED2Q7Z698 418 aa17.49■□□□□ 0.39
VTI1A-203ENST00000472892 SEPT8Q92599 483 aa17.49■□□□□ 0.39
VTI1A-203ENST00000472892 GLT8D2Q9H1C3 349 aa17.49■□□□□ 0.39
VTI1A-203ENST00000472892 SMARCAD1Q9H4L7 1026 aa17.49■□□□□ 0.39
VTI1A-203ENST00000472892 PKD2L1Q9P0L9 805 aa17.49■□□□□ 0.39
VTI1A-203ENST00000472892 SNX14Q9Y5W7 946 aa17.49■□□□□ 0.39
VTI1A-203ENST00000472892 TRANK1O15050 2925 aa17.49■□□□□ 0.39
VTI1A-203ENST00000472892 CCDC196A0A1B0GTZ2 297 aa17.48■□□□□ 0.39
VTI1A-203ENST00000472892 LPXNO60711 386 aa17.48■□□□□ 0.39
VTI1A-203ENST00000472892 AMHP03971 560 aa17.48■□□□□ 0.39
VTI1A-203ENST00000472892 MRPS5P82675 430 aaKnown RBP17.48■□□□□ 0.39
VTI1A-203ENST00000472892 FGD1P98174 961 aa17.48■□□□□ 0.39
VTI1A-203ENST00000472892 GRB10Q13322 594 aa17.48■□□□□ 0.39
VTI1A-203ENST00000472892 CEP55Q53EZ4 464 aa17.48■□□□□ 0.39
VTI1A-203ENST00000472892 TAF2Q6P1X5 1199 aa17.48■□□□□ 0.39
VTI1A-203ENST00000472892 Q6ZUG5 572 aa17.48■□□□□ 0.39
VTI1A-203ENST00000472892 GLG1Q92896 1179 aa17.48■□□□□ 0.39
VTI1A-203ENST00000472892 JAKMIP1Q96N16 626 aaKnown RBP17.48■□□□□ 0.39
VTI1A-203ENST00000472892 PCYT2Q99447 389 aa17.48■□□□□ 0.39
VTI1A-203ENST00000472892 ANO3Q9BYT9 981 aa17.48■□□□□ 0.39
VTI1A-203ENST00000472892 TSPYL2Q9H2G4 693 aaPredicted RBP17.48■□□□□ 0.39
VTI1A-203ENST00000472892 JPH1Q9HDC5 661 aaPredicted RBP17.48■□□□□ 0.39
VTI1A-203ENST00000472892 SLC9A2Q9UBY0 812 aa17.48■□□□□ 0.39
VTI1A-203ENST00000472892 INSL6Q9Y581 213 aa17.48■□□□□ 0.39
VTI1A-203ENST00000472892 NFASCO94856 1347 aa17.47■□□□□ 0.39
VTI1A-203ENST00000472892 MBLAC1A4D2B0 266 aaPredicted RBP17.47■□□□□ 0.39
VTI1A-203ENST00000472892 MEIS1O00470 390 aa17.47■□□□□ 0.39
VTI1A-203ENST00000472892 CHRNA1P02708 482 aa17.47■□□□□ 0.39
VTI1A-203ENST00000472892 CTSHP09668 335 aa17.47■□□□□ 0.39
VTI1A-203ENST00000472892 ARP10275 920 aa17.47■□□□□ 0.39
VTI1A-203ENST00000472892 METAP2P50579 478 aaKnown RBP eCLIP17.47■□□□□ 0.39
VTI1A-203ENST00000472892 ERVK-21P61565 698 aa17.47■□□□□ 0.39
VTI1A-203ENST00000472892 HTRA4P83105 476 aaPredicted RBP17.47■□□□□ 0.39
VTI1A-203ENST00000472892 APOBRQ0VD83 1088 aa17.47■□□□□ 0.39
VTI1A-203ENST00000472892 PPFIA1Q13136 1202 aa17.47■□□□□ 0.39
VTI1A-203ENST00000472892 AP3B2Q13367 1082 aa17.47■□□□□ 0.39
VTI1A-203ENST00000472892 PFKFB3Q16875 520 aaPredicted RBP17.47■□□□□ 0.39
VTI1A-203ENST00000472892 MARCH8Q5T0T0 291 aa17.47■□□□□ 0.39
VTI1A-203ENST00000472892 MICALL1Q8N3F8 863 aa17.47■□□□□ 0.39
VTI1A-203ENST00000472892 PGBD1Q96JS3 809 aa17.47■□□□□ 0.39
VTI1A-203ENST00000472892 AGXT2Q9BYV1 514 aa17.47■□□□□ 0.39
VTI1A-203ENST00000472892 TMEM260Q9NX78 707 aa17.47■□□□□ 0.39
VTI1A-203ENST00000472892 LINC01553A4QN01 128 aa17.46■□□□□ 0.39
VTI1A-203ENST00000472892 MARK3P27448 753 aa17.46■□□□□ 0.39
VTI1A-203ENST00000472892 SREBF1P36956 1147 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms