RNA–Protein interactions for RNA: ENST00000472729.1

COMMD1-208, Transcript of copper metabolism domain containing 1, humanhuman

TSL 3

Gene COMMD1, Length 629 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-208ENST00000472729 SLC28A3Q9HAS3 691 aa22.15■■□□□ 1.14
COMMD1-208ENST00000472729 BAIAP3O94812 1187 aa22.14■■□□□ 1.13
COMMD1-208ENST00000472729 CDX2Q99626 313 aaPredicted RBP22.14■■□□□ 1.13
COMMD1-208ENST00000472729 SLKQ9H2G2 1235 aaPredicted RBP22.14■■□□□ 1.13
COMMD1-208ENST00000472729 RNPEPQ9H4A4 650 aa22.14■■□□□ 1.13
COMMD1-208ENST00000472729 SH3GLB2Q9NR46 395 aa22.14■■□□□ 1.13
COMMD1-208ENST00000472729 SETD4Q9NVD3 440 aa22.14■■□□□ 1.13
COMMD1-208ENST00000472729 EMSYQ7Z589 1322 aa22.13■■□□□ 1.13
COMMD1-208ENST00000472729 NRCAMQ92823 1304 aa22.13■■□□□ 1.13
COMMD1-208ENST00000472729 RSPH10B2B2RC85 870 aa22.13■■□□□ 1.13
COMMD1-208ENST00000472729 DEXIO95424 95 aa22.13■■□□□ 1.13
COMMD1-208ENST00000472729 RSPH10BP0C881 870 aa22.13■■□□□ 1.13
COMMD1-208ENST00000472729 MARK3P27448 753 aa22.13■■□□□ 1.13
COMMD1-208ENST00000472729 CLK2P49760 499 aaKnown RBP22.13■■□□□ 1.13
COMMD1-208ENST00000472729 RBL2Q08999 1139 aa22.13■■□□□ 1.13
COMMD1-208ENST00000472729 NTRK3Q16288 839 aa22.13■■□□□ 1.13
COMMD1-208ENST00000472729 PKN1Q16512 942 aa22.13■■□□□ 1.13
COMMD1-208ENST00000472729 NIPA1Q7RTP0 329 aa22.13■■□□□ 1.13
COMMD1-208ENST00000472729 SERINC5Q86VE9 423 aa22.13■■□□□ 1.13
COMMD1-208ENST00000472729 PLA2G4DQ86XP0 818 aa22.13■■□□□ 1.13
COMMD1-208ENST00000472729 CYP2W1Q8TAV3 490 aa22.13■■□□□ 1.13
COMMD1-208ENST00000472729 DHX38Q92620 1227 aaKnown RBP22.13■■□□□ 1.13
COMMD1-208ENST00000472729 VPS54Q9P1Q0 977 aa22.13■■□□□ 1.13
COMMD1-208ENST00000472729 MEIS1O00470 390 aa22.12■■□□□ 1.13
COMMD1-208ENST00000472729 XBP1P17861 261 aa22.12■■□□□ 1.13
COMMD1-208ENST00000472729 PBX2P40425 430 aa22.12■■□□□ 1.13
COMMD1-208ENST00000472729 PPFIA1Q13136 1202 aa22.12■■□□□ 1.13
COMMD1-208ENST00000472729 ZNF618Q5T7W0 954 aa22.12■■□□□ 1.13
COMMD1-208ENST00000472729 RSPH3Q86UC2 560 aa22.12■■□□□ 1.13
COMMD1-208ENST00000472729 SLC17A8Q8NDX2 589 aa22.12■■□□□ 1.13
COMMD1-208ENST00000472729 PHOSPHO2Q8TCD6 241 aa22.12■■□□□ 1.13
COMMD1-208ENST00000472729 GUCD1Q96NT3 240 aa22.12■■□□□ 1.13
COMMD1-208ENST00000472729 CTAGE1Q96RT6 745 aa22.12■■□□□ 1.13
COMMD1-208ENST00000472729 SLC9A7Q96T83 725 aa22.12■■□□□ 1.13
COMMD1-208ENST00000472729 C22orf23Q9BZE7 217 aa22.12■■□□□ 1.13
COMMD1-208ENST00000472729 TTYH1Q9H313 450 aaPredicted RBP22.12■■□□□ 1.13
COMMD1-208ENST00000472729 AGO4Q9HCK5 861 aaKnown RBP22.12■■□□□ 1.13
COMMD1-208ENST00000472729 NFASCO94856 1347 aa22.11■■□□□ 1.13
COMMD1-208ENST00000472729 SCN10AQ9Y5Y9 1956 aa22.11■■□□□ 1.13
COMMD1-208ENST00000472729 TREHO43280 583 aa22.11■■□□□ 1.13
COMMD1-208ENST00000472729 CAND2O75155 1236 aa22.11■■□□□ 1.13
COMMD1-208ENST00000472729 ARP10275 920 aa22.11■■□□□ 1.13
COMMD1-208ENST00000472729 FOSL2P15408 326 aa22.11■■□□□ 1.13
COMMD1-208ENST00000472729 SETQ01105 290 aaPredicted RBP22.11■■□□□ 1.13
COMMD1-208ENST00000472729 IKBKEQ14164 716 aa22.11■■□□□ 1.13
COMMD1-208ENST00000472729 CNKSR3Q6P9H4 555 aa22.11■■□□□ 1.13
COMMD1-208ENST00000472729 ZBED2Q9BTP6 218 aa22.11■■□□□ 1.13
COMMD1-208ENST00000472729 TRPC6Q9Y210 931 aa22.11■■□□□ 1.13
COMMD1-208ENST00000472729 GSTTP1A0A1W2PQM5 241 aa22.1■■□□□ 1.13
COMMD1-208ENST00000472729 DDX39AO00148 427 aaKnown RBP22.1■■□□□ 1.13
COMMD1-208ENST00000472729 BACH1O14867 736 aa22.1■■□□□ 1.13
COMMD1-208ENST00000472729 EFCAB14O75071 495 aa22.1■■□□□ 1.13
COMMD1-208ENST00000472729 ACTR2P61160 394 aa22.1■■□□□ 1.13
COMMD1-208ENST00000472729 GAS2L1Q99501 681 aaPredicted RBP22.1■■□□□ 1.13
COMMD1-208ENST00000472729 ZNF577Q9BSK1 485 aa22.1■■□□□ 1.13
COMMD1-208ENST00000472729 PCDHA11Q9Y5I1 949 aa22.1■■□□□ 1.13
COMMD1-208ENST00000472729 KIAA1217Q5T5P2 1943 aa22.1■■□□□ 1.13
COMMD1-208ENST00000472729 ABHD14A-ACY1A0A1B0GW23 586 aa22.09■■□□□ 1.13
COMMD1-208ENST00000472729 IPO5O00410 1097 aaKnown RBP22.09■■□□□ 1.13
COMMD1-208ENST00000472729 CYP3A4P08684 503 aa22.09■■□□□ 1.13
COMMD1-208ENST00000472729 STAT5BP51692 787 aa22.09■■□□□ 1.13
COMMD1-208ENST00000472729 RABGGTBP53611 331 aa22.09■■□□□ 1.13
COMMD1-208ENST00000472729 PRR16Q569H4 304 aa22.09■■□□□ 1.13
COMMD1-208ENST00000472729 FAM160B1Q5W0V3 765 aa22.09■■□□□ 1.13
COMMD1-208ENST00000472729 PPP2R2DQ66LE6 453 aa22.09■■□□□ 1.13
COMMD1-208ENST00000472729 MIS18BP1Q6P0N0 1132 aa22.09■■□□□ 1.13
COMMD1-208ENST00000472729 TAF2Q6P1X5 1199 aa22.09■■□□□ 1.13
COMMD1-208ENST00000472729 LMBR1Q8WVP7 490 aa22.09■■□□□ 1.13
COMMD1-208ENST00000472729 MYLIPQ8WY64 445 aa22.09■■□□□ 1.13
COMMD1-208ENST00000472729 NKX2-4Q9H2Z4 354 aa22.09■■□□□ 1.13
COMMD1-208ENST00000472729 TBC1D22BQ9NU19 505 aa22.09■■□□□ 1.13
COMMD1-208ENST00000472729 TELO2Q9Y4R8 837 aa22.09■■□□□ 1.13
COMMD1-208ENST00000472729 RRN3P2A6NIE6 340 aa22.08■■□□□ 1.13
COMMD1-208ENST00000472729 FAM86B1E9PN63 330 aa22.08■■□□□ 1.13
COMMD1-208ENST00000472729 CTSHP09668 335 aa22.08■■□□□ 1.13
COMMD1-208ENST00000472729 FAM86B2P0C5J1 330 aa22.08■■□□□ 1.13
COMMD1-208ENST00000472729 IGBP1P78318 339 aa22.08■■□□□ 1.13
COMMD1-208ENST00000472729 GRIN2CQ14957 1233 aa22.08■■□□□ 1.13
COMMD1-208ENST00000472729 GRIK4Q16099 956 aa22.08■■□□□ 1.13
COMMD1-208ENST00000472729 GALNT17Q6IS24 598 aa22.08■■□□□ 1.13
COMMD1-208ENST00000472729 FAM177A1Q8N128 213 aaPredicted RBP22.08■■□□□ 1.13
COMMD1-208ENST00000472729 RASGRP4Q8TDF6 673 aa22.08■■□□□ 1.13
COMMD1-208ENST00000472729 PCDHA4Q9UN74 947 aa22.08■■□□□ 1.13
COMMD1-208ENST00000472729 NBNO60934 754 aa22.07■■□□□ 1.12
COMMD1-208ENST00000472729 LGR5O75473 907 aa22.07■■□□□ 1.12
COMMD1-208ENST00000472729 CXCL10P02778 98 aa22.07■■□□□ 1.12
COMMD1-208ENST00000472729 HOXC8P31273 242 aa22.07■■□□□ 1.12
COMMD1-208ENST00000472729 SLC26A2P50443 739 aa22.07■■□□□ 1.12
COMMD1-208ENST00000472729 HIC1Q14526 733 aa22.07■■□□□ 1.12
COMMD1-208ENST00000472729 TRIM71Q2Q1W2 868 aaKnown RBP22.07■■□□□ 1.12
COMMD1-208ENST00000472729 PLPPR4Q7Z2D5 763 aa22.07■■□□□ 1.12
COMMD1-208ENST00000472729 WASF1Q92558 559 aa22.07■■□□□ 1.12
COMMD1-208ENST00000472729 SEPT8Q92599 483 aa22.07■■□□□ 1.12
COMMD1-208ENST00000472729 TUBE1Q9UJT0 475 aa22.07■■□□□ 1.12
COMMD1-208ENST00000472729 SAMM50Q9Y512 469 aa22.07■■□□□ 1.12
COMMD1-208ENST00000472729 TLL1O43897 1013 aa22.06■■□□□ 1.12
COMMD1-208ENST00000472729 RPLP2P05387 115 aaKnown RBP22.06■■□□□ 1.12
COMMD1-208ENST00000472729 ITGB3BPQ13352 177 aaPredicted RBP22.06■■□□□ 1.12
COMMD1-208ENST00000472729 HERC6Q8IVU3 1022 aa22.06■■□□□ 1.12
COMMD1-208ENST00000472729 CKAP2LQ8IYA6 745 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms