RNA–Protein interactions for RNA: ENST00000472648.1

SIK3-208, Transcript of SIK family kinase 3, humanhuman

TSL 3

Gene SIK3, Length 267 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-208ENST00000472648 ITIH3Q06033 890 aa6.91□□□□□ -1.3
SIK3-208ENST00000472648 TBC1D8BQ0IIM8 1120 aa6.91□□□□□ -1.3
SIK3-208ENST00000472648 LAMC2Q13753 1193 aa6.91□□□□□ -1.3
SIK3-208ENST00000472648 POLA2Q14181 598 aa6.91□□□□□ -1.3
SIK3-208ENST00000472648 HIC1Q14526 733 aa6.91□□□□□ -1.3
SIK3-208ENST00000472648 CCDC96Q2M329 555 aa6.91□□□□□ -1.3
SIK3-208ENST00000472648 SPECC1Q5M775 1068 aa6.91□□□□□ -1.3
SIK3-208ENST00000472648 SPOUT1Q5T280 376 aaKnown RBP6.91□□□□□ -1.3
SIK3-208ENST00000472648 RCSD1Q6JBY9 416 aa6.91□□□□□ -1.3
SIK3-208ENST00000472648 PDE12Q6L8Q7 609 aaKnown RBP6.91□□□□□ -1.3
SIK3-208ENST00000472648 AACSQ86V21 672 aa6.91□□□□□ -1.3
SIK3-208ENST00000472648 RANBP17Q9H2T7 1088 aaKnown RBP6.91□□□□□ -1.3
SIK3-208ENST00000472648 AAASQ9NRG9 546 aa6.91□□□□□ -1.3
SIK3-208ENST00000472648 CDH22Q9UJ99 828 aa6.91□□□□□ -1.3
SIK3-208ENST00000472648 ANGPTL2Q9UKU9 493 aa6.91□□□□□ -1.3
SIK3-208ENST00000472648 MTMR7Q9Y216 660 aa6.91□□□□□ -1.3
SIK3-208ENST00000472648 PCDHB12Q9Y5F1 795 aa6.91□□□□□ -1.3
SIK3-208ENST00000472648 LAMA4Q16363 1823 aa6.91□□□□□ -1.3
SIK3-208ENST00000472648 EVPLQ92817 2033 aa6.91□□□□□ -1.3
SIK3-208ENST00000472648 ZFYVE26Q68DK2 2539 aa6.9□□□□□ -1.3
SIK3-208ENST00000472648 MTCL1Q9Y4B5 1905 aaKnown RBP6.9□□□□□ -1.3
SIK3-208ENST00000472648 TREHO43280 583 aa6.9□□□□□ -1.3
SIK3-208ENST00000472648 PRDM1O75626 825 aa6.9□□□□□ -1.3
SIK3-208ENST00000472648 BCAR3O75815 825 aa6.9□□□□□ -1.3
SIK3-208ENST00000472648 ARP10275 920 aa6.9□□□□□ -1.3
SIK3-208ENST00000472648 GHRP10912 638 aa6.9□□□□□ -1.3
SIK3-208ENST00000472648 GNAT1P11488 350 aa6.9□□□□□ -1.3
SIK3-208ENST00000472648 RARSP54136 660 aaKnown RBP6.9□□□□□ -1.3
SIK3-208ENST00000472648 TDGQ13569 410 aa6.9□□□□□ -1.3
SIK3-208ENST00000472648 KCNC3Q14003 757 aa6.9□□□□□ -1.3
SIK3-208ENST00000472648 SLFNL1Q499Z3 407 aa6.9□□□□□ -1.3
SIK3-208ENST00000472648 SBK1Q52WX2 424 aa6.9□□□□□ -1.3
SIK3-208ENST00000472648 PPP4R3BQ5MIZ7 849 aa6.9□□□□□ -1.3
SIK3-208ENST00000472648 PLPP4Q5VZY2 271 aa6.9□□□□□ -1.3
SIK3-208ENST00000472648 RUFY4Q6ZNE9 571 aa6.9□□□□□ -1.3
SIK3-208ENST00000472648 CRIPAKQ8N1N5 446 aa6.9□□□□□ -1.3
SIK3-208ENST00000472648 RASGRP4Q8TDF6 673 aa6.9□□□□□ -1.3
SIK3-208ENST00000472648 SSH3Q8TE77 659 aa6.9□□□□□ -1.3
SIK3-208ENST00000472648 CASP10Q92851 521 aa6.9□□□□□ -1.3
SIK3-208ENST00000472648 ADAM7Q9H2U9 754 aa6.9□□□□□ -1.3
SIK3-208ENST00000472648 ENTPD7Q9NQZ7 604 aa6.9□□□□□ -1.3
SIK3-208ENST00000472648 DBR1Q9UK59 544 aaKnown RBP6.9□□□□□ -1.3
SIK3-208ENST00000472648 PNMA2Q9UL42 364 aa6.9□□□□□ -1.3
SIK3-208ENST00000472648 DUSP12Q9UNI6 340 aa6.9□□□□□ -1.3
SIK3-208ENST00000472648 MRVI1Q9Y6F6 885 aa6.9□□□□□ -1.3
SIK3-208ENST00000472648 ENPP3O14638 875 aa6.89□□□□□ -1.31
SIK3-208ENST00000472648 SPTLC1O15269 473 aa6.89□□□□□ -1.31
SIK3-208ENST00000472648 PPFIA4O75335 1185 aa6.89□□□□□ -1.31
SIK3-208ENST00000472648 FGF18O76093 207 aa6.89□□□□□ -1.31
SIK3-208ENST00000472648 STAG3L1P0CL83 205 aa6.89□□□□□ -1.31
SIK3-208ENST00000472648 SMIM10L2AP0DMW4 78 aa6.89□□□□□ -1.31
SIK3-208ENST00000472648 SMIM10L2BP0DMW5 78 aa6.89□□□□□ -1.31
SIK3-208ENST00000472648 ERVFC1P60507 584 aa6.89□□□□□ -1.31
SIK3-208ENST00000472648 STXBP2Q15833 593 aa6.89□□□□□ -1.31
SIK3-208ENST00000472648 FAM26DQ5JW98 314 aa6.89□□□□□ -1.31
SIK3-208ENST00000472648 NPAS4Q8IUM7 802 aa6.89□□□□□ -1.31
SIK3-208ENST00000472648 C1orf210Q8IVY1 113 aa6.89□□□□□ -1.31
SIK3-208ENST00000472648 THNSL1Q8IYQ7 743 aa6.89□□□□□ -1.31
SIK3-208ENST00000472648 NEDD1Q8NHV4 660 aa6.89□□□□□ -1.31
SIK3-208ENST00000472648 CLEC4DQ8WXI8 215 aa6.89□□□□□ -1.31
SIK3-208ENST00000472648 ACSF2Q96CM8 615 aaPredicted RBP6.89□□□□□ -1.31
SIK3-208ENST00000472648 BORCS6Q96GS4 357 aa6.89□□□□□ -1.31
SIK3-208ENST00000472648 CYP26B1Q9NR63 512 aa6.89□□□□□ -1.31
SIK3-208ENST00000472648 PAG1Q9NWQ8 432 aa6.89□□□□□ -1.31
SIK3-208ENST00000472648 TMEM260Q9NX78 707 aa6.89□□□□□ -1.31
SIK3-208ENST00000472648 DDX41Q9UJV9 622 aaKnown RBP6.89□□□□□ -1.31
SIK3-208ENST00000472648 LRFN2Q9ULH4 789 aa6.89□□□□□ -1.31
SIK3-208ENST00000472648 STX8Q9UNK0 236 aa6.89□□□□□ -1.31
SIK3-208ENST00000472648 USTQ9Y2C2 406 aa6.89□□□□□ -1.31
SIK3-208ENST00000472648 NOP58Q9Y2X3 529 aaKnown RBP6.89□□□□□ -1.31
SIK3-208ENST00000472648 CCDC171Q6TFL3 1326 aa6.89□□□□□ -1.31
SIK3-208ENST00000472648 ASH1LQ9NR48 2969 aaKnown RBP6.89□□□□□ -1.31
SIK3-208ENST00000472648 ADAMTS20P59510 1910 aa6.88□□□□□ -1.31
SIK3-208ENST00000472648 H3BRB1 525 aa6.88□□□□□ -1.31
SIK3-208ENST00000472648 SORBS3O60504 671 aa6.88□□□□□ -1.31
SIK3-208ENST00000472648 EOMESO95936 686 aa6.88□□□□□ -1.31
SIK3-208ENST00000472648 DCNP07585 359 aaKnown RBP6.88□□□□□ -1.31
SIK3-208ENST00000472648 CFHP08603 1231 aa6.88□□□□□ -1.31
SIK3-208ENST00000472648 WEE2P0C1S8 567 aa6.88□□□□□ -1.31
SIK3-208ENST00000472648 HOXD8P13378 290 aaPredicted RBP6.88□□□□□ -1.31
SIK3-208ENST00000472648 HOXC8P31273 242 aa6.88□□□□□ -1.31
SIK3-208ENST00000472648 SLC16A2P36021 539 aa6.88□□□□□ -1.31
SIK3-208ENST00000472648 TDO2P48775 406 aa6.88□□□□□ -1.31
SIK3-208ENST00000472648 ATP8B2P98198 1209 aa6.88□□□□□ -1.31
SIK3-208ENST00000472648 UBE3CQ15386 1083 aa6.88□□□□□ -1.31
SIK3-208ENST00000472648 RARS2Q5T160 578 aaKnown RBP6.88□□□□□ -1.31
SIK3-208ENST00000472648 SYDE2Q5VT97 1194 aa6.88□□□□□ -1.31
SIK3-208ENST00000472648 KIAA1841Q6NSI8 718 aa6.88□□□□□ -1.31
SIK3-208ENST00000472648 XRRA1Q6P2D8 792 aa6.88□□□□□ -1.31
SIK3-208ENST00000472648 GIMAP6Q6P9H5 292 aa6.88□□□□□ -1.31
SIK3-208ENST00000472648 RASGRP2Q7LDG7 609 aa6.88□□□□□ -1.31
SIK3-208ENST00000472648 ERC1Q8IUD2 1116 aa6.88□□□□□ -1.31
SIK3-208ENST00000472648 NETO1Q8TDF5 533 aa6.88□□□□□ -1.31
SIK3-208ENST00000472648 NSUN6Q8TEA1 469 aaKnown RBP6.88□□□□□ -1.31
SIK3-208ENST00000472648 DCAF4Q8WV16 495 aa6.88□□□□□ -1.31
SIK3-208ENST00000472648 SPATA33Q96N06 139 aa6.88□□□□□ -1.31
SIK3-208ENST00000472648 TCF25Q9BQ70 676 aa6.88□□□□□ -1.31
SIK3-208ENST00000472648 RNPEPQ9H4A4 650 aa6.88□□□□□ -1.31
SIK3-208ENST00000472648 TUT1Q9H6E5 874 aaKnown RBP6.88□□□□□ -1.31
SIK3-208ENST00000472648 TBC1D17Q9HA65 648 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms