RNA–Protein interactions for RNA: ENST00000472441.1

TM4SF1-202, Transcript of transmembrane 4 L six family member 1, humanhuman

TSL 2 BASIC

Gene TM4SF1, Length 3,115 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-202ENST00000472441 RRP9O43818 475 aaKnown RBP5.39□□□□□ -1.55
TM4SF1-202ENST00000472441 CYP3A4P08684 503 aa5.39□□□□□ -1.55
TM4SF1-202ENST00000472441 RSPH10BP0C881 870 aa5.39□□□□□ -1.55
TM4SF1-202ENST00000472441 CIITAP33076 1130 aa5.39□□□□□ -1.55
TM4SF1-202ENST00000472441 GIT2Q14161 759 aa5.39□□□□□ -1.55
TM4SF1-202ENST00000472441 KIF4BQ2VIQ3 1234 aa5.39□□□□□ -1.55
TM4SF1-202ENST00000472441 CEP55Q53EZ4 464 aa5.39□□□□□ -1.55
TM4SF1-202ENST00000472441 ZNF569Q5MCW4 686 aa5.39□□□□□ -1.55
TM4SF1-202ENST00000472441 PDCL2Q8N4E4 241 aa5.39□□□□□ -1.55
TM4SF1-202ENST00000472441 MNS1Q8NEH6 495 aa5.39□□□□□ -1.55
TM4SF1-202ENST00000472441 NLGN2Q8NFZ4 835 aa5.39□□□□□ -1.55
TM4SF1-202ENST00000472441 REEP2Q9BRK0 252 aa5.39□□□□□ -1.55
TM4SF1-202ENST00000472441 EHMT1Q9H9B1 1298 aa5.39□□□□□ -1.55
TM4SF1-202ENST00000472441 ZNHIT6Q9NWK9 470 aaKnown RBP5.39□□□□□ -1.55
TM4SF1-202ENST00000472441 CAPN11Q9UMQ6 739 aa5.39□□□□□ -1.55
TM4SF1-202ENST00000472441 SYNPO2Q9UMS6 1093 aa5.39□□□□□ -1.55
TM4SF1-202ENST00000472441 TFR2Q9UP52 801 aa5.39□□□□□ -1.55
TM4SF1-202ENST00000472441 RABGAP1Q9Y3P9 1069 aa5.39□□□□□ -1.55
TM4SF1-202ENST00000472441 EPN1Q9Y6I3 576 aaPredicted RBP5.39□□□□□ -1.55
TM4SF1-202ENST00000472441 RASSF10A6NK89 507 aa5.39□□□□□ -1.55
TM4SF1-202ENST00000472441 PRPF6O94906 941 aaKnown RBP5.39□□□□□ -1.55
TM4SF1-202ENST00000472441 TUBB4AP04350 444 aa5.39□□□□□ -1.55
TM4SF1-202ENST00000472441 CASP5P51878 434 aa5.39□□□□□ -1.55
TM4SF1-202ENST00000472441 PRELPP51888 382 aa5.39□□□□□ -1.55
TM4SF1-202ENST00000472441 FKBP3Q00688 224 aaKnown RBP5.39□□□□□ -1.55
TM4SF1-202ENST00000472441 LRRC63Q05C16 580 aa5.39□□□□□ -1.55
TM4SF1-202ENST00000472441 EHHADHQ08426 723 aa5.39□□□□□ -1.55
TM4SF1-202ENST00000472441 ADAM9Q13443 819 aa5.39□□□□□ -1.55
TM4SF1-202ENST00000472441 ELF2Q15723 593 aa5.39□□□□□ -1.55
TM4SF1-202ENST00000472441 ERCC6LQ2NKX8 1250 aa5.39□□□□□ -1.55
TM4SF1-202ENST00000472441 ANGEL2Q5VTE6 544 aaKnown RBP5.39□□□□□ -1.55
TM4SF1-202ENST00000472441 MAEAQ7L5Y9 396 aa5.39□□□□□ -1.55
TM4SF1-202ENST00000472441 OTOP1Q7RTM1 612 aa5.39□□□□□ -1.55
TM4SF1-202ENST00000472441 SFR1Q86XK3 245 aa5.39□□□□□ -1.55
TM4SF1-202ENST00000472441 SYT2Q8N9I0 419 aaPredicted RBP5.39□□□□□ -1.55
TM4SF1-202ENST00000472441 SMCR8Q8TEV9 937 aaPredicted RBP5.39□□□□□ -1.55
TM4SF1-202ENST00000472441 SCFD1Q8WVM8 642 aa5.39□□□□□ -1.55
TM4SF1-202ENST00000472441 ERO1AQ96HE7 468 aa5.39□□□□□ -1.55
TM4SF1-202ENST00000472441 SGIP1Q9BQI5 828 aa5.39□□□□□ -1.55
TM4SF1-202ENST00000472441 CRACR2AQ9BSW2 395 aa5.39□□□□□ -1.55
TM4SF1-202ENST00000472441 CARD6Q9BX69 1037 aa5.39□□□□□ -1.55
TM4SF1-202ENST00000472441 PDCL3Q9H2J4 239 aa5.39□□□□□ -1.55
TM4SF1-202ENST00000472441 VAV3Q9UKW4 847 aa5.39□□□□□ -1.55
TM4SF1-202ENST00000472441 GUCA1BQ9UMX6 200 aa5.39□□□□□ -1.55
TM4SF1-202ENST00000472441 SAMM50Q9Y512 469 aa5.39□□□□□ -1.55
TM4SF1-202ENST00000472441 PHLPP2Q6ZVD8 1323 aa5.38□□□□□ -1.55
TM4SF1-202ENST00000472441 KIF5CO60282 957 aa5.38□□□□□ -1.55
TM4SF1-202ENST00000472441 CTNND1O60716 968 aaKnown RBP5.38□□□□□ -1.55
TM4SF1-202ENST00000472441 TBCAO75347 108 aaKnown RBP5.38□□□□□ -1.55
TM4SF1-202ENST00000472441 SLITRK3O94933 977 aa5.38□□□□□ -1.55
TM4SF1-202ENST00000472441 GCNT3O95395 438 aa5.38□□□□□ -1.55
TM4SF1-202ENST00000472441 ICAM1P05362 532 aa5.38□□□□□ -1.55
TM4SF1-202ENST00000472441 MYBP10242 640 aa5.38□□□□□ -1.55
TM4SF1-202ENST00000472441 MYCLP12524 364 aaPredicted RBP5.38□□□□□ -1.55
TM4SF1-202ENST00000472441 EIF2AK2P19525 551 aaKnown RBP5.38□□□□□ -1.55
TM4SF1-202ENST00000472441 RPS12P25398 132 aaKnown RBP5.38□□□□□ -1.55
TM4SF1-202ENST00000472441 PTGER2P43116 358 aa5.38□□□□□ -1.55
TM4SF1-202ENST00000472441 ZNF280AP59817 542 aaPredicted RBP5.38□□□□□ -1.55
TM4SF1-202ENST00000472441 MAN2A1Q16706 1144 aa5.38□□□□□ -1.55
TM4SF1-202ENST00000472441 COBLL1Q53SF7 1204 aa5.38□□□□□ -1.55
TM4SF1-202ENST00000472441 MUM1L1Q5H9M0 696 aa5.38□□□□□ -1.55
TM4SF1-202ENST00000472441 NSMFQ6X4W1 530 aa5.38□□□□□ -1.55
TM4SF1-202ENST00000472441 ARHGAP27Q6ZUM4 889 aa5.38□□□□□ -1.55
TM4SF1-202ENST00000472441 BANK1Q8NDB2 785 aa5.38□□□□□ -1.55
TM4SF1-202ENST00000472441 ZNF397Q8NF99 534 aaPredicted RBP5.38□□□□□ -1.55
TM4SF1-202ENST00000472441 PURBQ96QR8 312 aaKnown RBP5.38□□□□□ -1.55
TM4SF1-202ENST00000472441 WRNIP1Q96S55 665 aa5.38□□□□□ -1.55
TM4SF1-202ENST00000472441 NUP58Q9BVL2 599 aa5.38□□□□□ -1.55
TM4SF1-202ENST00000472441 RUSC1Q9BVN2 902 aa5.38□□□□□ -1.55
TM4SF1-202ENST00000472441 WDR11Q9BZH6 1224 aa5.38□□□□□ -1.55
TM4SF1-202ENST00000472441 RPAP3Q9H6T3 665 aaPredicted RBP5.38□□□□□ -1.55
TM4SF1-202ENST00000472441 ZSWIM4Q9H7M6 989 aa5.38□□□□□ -1.55
TM4SF1-202ENST00000472441 COL20A1Q9P218 1284 aa5.38□□□□□ -1.55
TM4SF1-202ENST00000472441 TRIM10Q9UDY6 481 aa5.38□□□□□ -1.55
TM4SF1-202ENST00000472441 COL4A3BPQ9Y5P4 624 aa5.38□□□□□ -1.55
TM4SF1-202ENST00000472441 ZNF536O15090 1300 aa5.38□□□□□ -1.55
TM4SF1-202ENST00000472441 IPO5O00410 1097 aaKnown RBP5.38□□□□□ -1.55
TM4SF1-202ENST00000472441 EPHB6O15197 1021 aa5.38□□□□□ -1.55
TM4SF1-202ENST00000472441 WDR46O15213 610 aaKnown RBP5.38□□□□□ -1.55
TM4SF1-202ENST00000472441 CLIC2O15247 247 aa5.38□□□□□ -1.55
TM4SF1-202ENST00000472441 PSMD10O75832 226 aa5.38□□□□□ -1.55
TM4SF1-202ENST00000472441 NDUFA10O95299 355 aa5.38□□□□□ -1.55
TM4SF1-202ENST00000472441 EPS15P42566 896 aa5.38□□□□□ -1.55
TM4SF1-202ENST00000472441 MAP3K10Q02779 954 aa5.38□□□□□ -1.55
TM4SF1-202ENST00000472441 WDR59Q6PJI9 974 aa5.38□□□□□ -1.55
TM4SF1-202ENST00000472441 LRRC55Q6ZSA7 311 aa5.38□□□□□ -1.55
TM4SF1-202ENST00000472441 MYCT1Q8N699 235 aa5.38□□□□□ -1.55
TM4SF1-202ENST00000472441 IL31RAQ8NI17 732 aa5.38□□□□□ -1.55
TM4SF1-202ENST00000472441 SH2D3AQ9BRG2 576 aa5.38□□□□□ -1.55
TM4SF1-202ENST00000472441 UNC45AQ9H3U1 944 aa5.38□□□□□ -1.55
TM4SF1-202ENST00000472441 NLRC4Q9NPP4 1024 aa5.38□□□□□ -1.55
TM4SF1-202ENST00000472441 PCDHA2Q9Y5H9 948 aa5.38□□□□□ -1.55
TM4SF1-202ENST00000472441 ZHX2Q9Y6X8 837 aa5.38□□□□□ -1.55
TM4SF1-202ENST00000472441 ZNF541Q9H0D2 1346 aa5.37□□□□□ -1.55
TM4SF1-202ENST00000472441 SORBS3O60504 671 aa5.37□□□□□ -1.55
TM4SF1-202ENST00000472441 PLA2G6O60733 806 aa5.37□□□□□ -1.55
TM4SF1-202ENST00000472441 ZBED4O75132 1171 aa5.37□□□□□ -1.55
TM4SF1-202ENST00000472441 FAM13AO94988 1023 aa5.37□□□□□ -1.55
TM4SF1-202ENST00000472441 KIF20AO95235 890 aa5.37□□□□□ -1.55
TM4SF1-202ENST00000472441 EYA4O95677 639 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms