RNA–Protein interactions for RNA: ENST00000472224.1

CLRN1-205, Transcript of clarin 1, humanhuman

TSL 3

Gene CLRN1, Length 606 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-205ENST00000472224 ZMYND12Q9H0C1 365 aa13.55□□□□□ -0.24
CLRN1-205ENST00000472224 MLXIPQ9HAP2 919 aa13.55□□□□□ -0.24
CLRN1-205ENST00000472224 ORC3Q9UBD5 711 aaPredicted RBP13.55□□□□□ -0.24
CLRN1-205ENST00000472224 KAT6AQ92794 2004 aa13.54□□□□□ -0.24
CLRN1-205ENST00000472224 FAM86C2PA6NEL3 165 aa13.54□□□□□ -0.24
CLRN1-205ENST00000472224 DCDC2CA8MYV0 355 aa13.54□□□□□ -0.24
CLRN1-205ENST00000472224 ARVCFO00192 962 aa13.54□□□□□ -0.24
CLRN1-205ENST00000472224 NOP56O00567 594 aaKnown RBP13.54□□□□□ -0.24
CLRN1-205ENST00000472224 ZNF76P36508 570 aa13.54□□□□□ -0.24
CLRN1-205ENST00000472224 RBM25P49756 843 aaKnown RBP13.54□□□□□ -0.24
CLRN1-205ENST00000472224 CLK2P49760 499 aaKnown RBP13.54□□□□□ -0.24
CLRN1-205ENST00000472224 SP2Q02086 613 aa13.54□□□□□ -0.24
CLRN1-205ENST00000472224 PPIGQ13427 754 aaKnown RBP eCLIP13.54□□□□□ -0.24
CLRN1-205ENST00000472224 MTMR1Q13613 665 aa13.54□□□□□ -0.24
CLRN1-205ENST00000472224 LAMC2Q13753 1193 aa13.54□□□□□ -0.24
CLRN1-205ENST00000472224 RABEP1Q15276 862 aa13.54□□□□□ -0.24
CLRN1-205ENST00000472224 DGKDQ16760 1214 aa13.54□□□□□ -0.24
CLRN1-205ENST00000472224 FAM47CQ5HY64 1035 aa13.54□□□□□ -0.24
CLRN1-205ENST00000472224 CELF3Q5SZQ8 465 aaKnown RBP13.54□□□□□ -0.24
CLRN1-205ENST00000472224 ZNF365Q70YC5 407 aa13.54□□□□□ -0.24
CLRN1-205ENST00000472224 MICALL1Q8N3F8 863 aa13.54□□□□□ -0.24
CLRN1-205ENST00000472224 PPTC7Q8NI37 304 aa13.54□□□□□ -0.24
CLRN1-205ENST00000472224 SNX27Q96L92 541 aa13.54□□□□□ -0.24
CLRN1-205ENST00000472224 SH3GLB2Q9NR46 395 aa13.54□□□□□ -0.24
CLRN1-205ENST00000472224 MROH7Q68CQ1 1323 aa13.54□□□□□ -0.24
CLRN1-205ENST00000472224 STK36Q9NRP7 1315 aa13.54□□□□□ -0.24
CLRN1-205ENST00000472224 TRIP12Q14669 1992 aaPredicted RBP13.54□□□□□ -0.24
CLRN1-205ENST00000472224 A6NJR5 290 aa13.53□□□□□ -0.24
CLRN1-205ENST00000472224 SPATA31C2B4DYI2 1134 aa13.53□□□□□ -0.24
CLRN1-205ENST00000472224 TLR3O15455 904 aaKnown RBP13.53□□□□□ -0.24
CLRN1-205ENST00000472224 JAK2O60674 1132 aa13.53□□□□□ -0.24
CLRN1-205ENST00000472224 KPNA6O60684 536 aa13.53□□□□□ -0.24
CLRN1-205ENST00000472224 CTDNEP1O95476 244 aa13.53□□□□□ -0.24
CLRN1-205ENST00000472224 TGFB3P10600 412 aa13.53□□□□□ -0.24
CLRN1-205ENST00000472224 CHRM1P11229 460 aaPredicted RBP13.53□□□□□ -0.24
CLRN1-205ENST00000472224 ITGB5P18084 799 aa13.53□□□□□ -0.24
CLRN1-205ENST00000472224 ICAM3P32942 547 aa13.53□□□□□ -0.24
CLRN1-205ENST00000472224 SREBF1P36956 1147 aa13.53□□□□□ -0.24
CLRN1-205ENST00000472224 ARHGAP4P98171 946 aa13.53□□□□□ -0.24
CLRN1-205ENST00000472224 RAB30Q15771 203 aa13.53□□□□□ -0.24
CLRN1-205ENST00000472224 CYFIP1Q7L576 1253 aa13.53□□□□□ -0.24
CLRN1-205ENST00000472224 TEX2Q8IWB9 1127 aa13.53□□□□□ -0.24
CLRN1-205ENST00000472224 CCDC83Q8IWF9 413 aa13.53□□□□□ -0.24
CLRN1-205ENST00000472224 GPRASP2Q96D09 838 aa13.53□□□□□ -0.24
CLRN1-205ENST00000472224 CDHR1Q96JP9 859 aa13.53□□□□□ -0.24
CLRN1-205ENST00000472224 KIF2CQ99661 725 aa13.53□□□□□ -0.24
CLRN1-205ENST00000472224 KCNJ14Q9UNX9 436 aa13.53□□□□□ -0.24
CLRN1-205ENST00000472224 LIMCH1Q9UPQ0 1083 aa13.53□□□□□ -0.24
CLRN1-205ENST00000472224 UBIAD1Q9Y5Z9 338 aa13.53□□□□□ -0.24
CLRN1-205ENST00000472224 GPR37L1O60883 481 aa13.52□□□□□ -0.25
CLRN1-205ENST00000472224 XBP1P17861 261 aa13.52□□□□□ -0.25
CLRN1-205ENST00000472224 NEDD9Q14511 834 aa13.52□□□□□ -0.25
CLRN1-205ENST00000472224 NBPF20Q3BBV1 942 aa13.52□□□□□ -0.25
CLRN1-205ENST00000472224 HSDL1Q3SXM5 330 aa13.52□□□□□ -0.25
CLRN1-205ENST00000472224 MYSM1Q5VVJ2 828 aa13.52□□□□□ -0.25
CLRN1-205ENST00000472224 METTL7BQ6UX53 244 aa13.52□□□□□ -0.25
CLRN1-205ENST00000472224 NSUN7Q8NE18 718 aaKnown RBP13.52□□□□□ -0.25
CLRN1-205ENST00000472224 WASF1Q92558 559 aa13.52□□□□□ -0.25
CLRN1-205ENST00000472224 EMID1Q96A84 441 aaPredicted RBP13.52□□□□□ -0.25
CLRN1-205ENST00000472224 KIF12Q96FN5 646 aa13.52□□□□□ -0.25
CLRN1-205ENST00000472224 TBC1D32Q96NH3 1257 aa13.52□□□□□ -0.25
CLRN1-205ENST00000472224 ALG1Q9BT22 464 aa13.52□□□□□ -0.25
CLRN1-205ENST00000472224 BCAS3Q9H6U6 928 aa13.52□□□□□ -0.25
CLRN1-205ENST00000472224 SLC28A3Q9HAS3 691 aa13.52□□□□□ -0.25
CLRN1-205ENST00000472224 JADE2Q9NQC1 790 aa13.52□□□□□ -0.25
CLRN1-205ENST00000472224 MSRAQ9UJ68 235 aa13.52□□□□□ -0.25
CLRN1-205ENST00000472224 GRIN2DO15399 1336 aa13.52□□□□□ -0.25
CLRN1-205ENST00000472224 TLL1O43897 1013 aa13.51□□□□□ -0.25
CLRN1-205ENST00000472224 ST18O60284 1047 aa13.51□□□□□ -0.25
CLRN1-205ENST00000472224 MYOGP15173 224 aa13.51□□□□□ -0.25
CLRN1-205ENST00000472224 CDK7P50613 346 aa13.51□□□□□ -0.25
CLRN1-205ENST00000472224 ST3GAL1Q11201 340 aa13.51□□□□□ -0.25
CLRN1-205ENST00000472224 AAK1Q2M2I8 961 aa13.51□□□□□ -0.25
CLRN1-205ENST00000472224 MCTP2Q6DN12 878 aa13.51□□□□□ -0.25
CLRN1-205ENST00000472224 PSRC1Q6PGN9 363 aaPredicted RBP13.51□□□□□ -0.25
CLRN1-205ENST00000472224 FAM126BQ8IXS8 530 aa13.51□□□□□ -0.25
CLRN1-205ENST00000472224 BLIDQ8IZY5 108 aa13.51□□□□□ -0.25
CLRN1-205ENST00000472224 CYP2W1Q8TAV3 490 aa13.51□□□□□ -0.25
CLRN1-205ENST00000472224 HERVK_113Q902F9 699 aa13.51□□□□□ -0.25
CLRN1-205ENST00000472224 UIMC1Q96RL1 719 aa13.51□□□□□ -0.25
CLRN1-205ENST00000472224 MXRA8Q9BRK3 442 aa13.51□□□□□ -0.25
CLRN1-205ENST00000472224 TRPV6Q9H1D0 765 aa13.51□□□□□ -0.25
CLRN1-205ENST00000472224 GJB4Q9NTQ9 266 aa13.51□□□□□ -0.25
CLRN1-205ENST00000472224 TRMT13Q9NUP7 481 aaKnown RBP13.51□□□□□ -0.25
CLRN1-205ENST00000472224 PCDHA4Q9UN74 947 aa13.51□□□□□ -0.25
CLRN1-205ENST00000472224 PRRC2BQ5JSZ5 2229 aaKnown RBP13.5□□□□□ -0.25
CLRN1-205ENST00000472224 B4GALT4O60513 344 aa13.5□□□□□ -0.25
CLRN1-205ENST00000472224 ATP9AO75110 1047 aa13.5□□□□□ -0.25
CLRN1-205ENST00000472224 KCNA2P16389 499 aa13.5□□□□□ -0.25
CLRN1-205ENST00000472224 PSEN2P49810 448 aa13.5□□□□□ -0.25
CLRN1-205ENST00000472224 RABGGTBP53611 331 aa13.5□□□□□ -0.25
CLRN1-205ENST00000472224 MFSD10Q14728 455 aa13.5□□□□□ -0.25
CLRN1-205ENST00000472224 CEP55Q53EZ4 464 aa13.5□□□□□ -0.25
CLRN1-205ENST00000472224 UTP14CQ5TAP6 766 aaKnown RBP13.5□□□□□ -0.25
CLRN1-205ENST00000472224 PLA2G4DQ86XP0 818 aa13.5□□□□□ -0.25
CLRN1-205ENST00000472224 KATNAL1Q9BW62 490 aa13.5□□□□□ -0.25
CLRN1-205ENST00000472224 PPP1R12CQ9BZL4 782 aa13.5□□□□□ -0.25
CLRN1-205ENST00000472224 NOD1Q9Y239 953 aa13.5□□□□□ -0.25
CLRN1-205ENST00000472224 TELO2Q9Y4R8 837 aa13.5□□□□□ -0.25
CLRN1-205ENST00000472224 MYH9P35579 1960 aaKnown RBP13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms