RNA–Protein interactions for RNA: ENST00000472103.5

SMARCD3-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 5

Gene SMARCD3, Length 798 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-207ENST00000472103 KCNA10Q16322 511 aa16.53■□□□□ 0.24
SMARCD3-207ENST00000472103 GNASQ5JWF2 1037 aa16.53■□□□□ 0.24
SMARCD3-207ENST00000472103 ABHD15Q6UXT9 468 aa16.53■□□□□ 0.24
SMARCD3-207ENST00000472103 TRIM50Q86XT4 487 aa16.53■□□□□ 0.24
SMARCD3-207ENST00000472103 SLFN12Q8IYM2 578 aa16.53■□□□□ 0.24
SMARCD3-207ENST00000472103 LINC00301Q8NCQ3 95 aa16.53■□□□□ 0.24
SMARCD3-207ENST00000472103 DIS3LQ8TF46 1054 aaKnown RBP16.53■□□□□ 0.24
SMARCD3-207ENST00000472103 PPP1R13LQ8WUF5 828 aa16.53■□□□□ 0.24
SMARCD3-207ENST00000472103 SEPT1Q8WYJ6 367 aa16.53■□□□□ 0.24
SMARCD3-207ENST00000472103 ZNF396Q96N95 335 aaPredicted RBP16.53■□□□□ 0.24
SMARCD3-207ENST00000472103 POLR3EQ9NVU0 708 aa16.53■□□□□ 0.24
SMARCD3-207ENST00000472103 ASGR1P07306 291 aa16.52■□□□□ 0.24
SMARCD3-207ENST00000472103 MYL3P08590 195 aa16.52■□□□□ 0.24
SMARCD3-207ENST00000472103 ZNF286BP0CG31 522 aa16.52■□□□□ 0.24
SMARCD3-207ENST00000472103 TCF7P36402 384 aaPredicted RBP16.52■□□□□ 0.24
SMARCD3-207ENST00000472103 PRPHP41219 470 aa16.52■□□□□ 0.24
SMARCD3-207ENST00000472103 KRT76Q01546 638 aa16.52■□□□□ 0.24
SMARCD3-207ENST00000472103 PPP2R5CQ13362 524 aa16.52■□□□□ 0.24
SMARCD3-207ENST00000472103 SLC39A14Q15043 492 aa16.52■□□□□ 0.24
SMARCD3-207ENST00000472103 UTP14CQ5TAP6 766 aaKnown RBP16.52■□□□□ 0.24
SMARCD3-207ENST00000472103 NCAPH2Q6IBW4 605 aa16.52■□□□□ 0.24
SMARCD3-207ENST00000472103 ZNF746Q6NUN9 644 aaPredicted RBP16.52■□□□□ 0.24
SMARCD3-207ENST00000472103 KAT2BQ92831 832 aa16.52■□□□□ 0.24
SMARCD3-207ENST00000472103 FBXO2Q9UK22 296 aaPredicted RBP16.52■□□□□ 0.24
SMARCD3-207ENST00000472103 PCDHA12Q9UN75 941 aa16.52■□□□□ 0.24
SMARCD3-207ENST00000472103 IGKV6D-21A0A0A0MT36 114 aa16.51■□□□□ 0.23
SMARCD3-207ENST00000472103 PP2D1A8MPX8 630 aa16.51■□□□□ 0.23
SMARCD3-207ENST00000472103 NOP56O00567 594 aaKnown RBP16.51■□□□□ 0.23
SMARCD3-207ENST00000472103 LGALS2P05162 132 aa16.51■□□□□ 0.23
SMARCD3-207ENST00000472103 SUPT20HL2P0C7V6 817 aa16.51■□□□□ 0.23
SMARCD3-207ENST00000472103 CPT1AP50416 773 aa16.51■□□□□ 0.23
SMARCD3-207ENST00000472103 SOX10P56693 466 aa16.51■□□□□ 0.23
SMARCD3-207ENST00000472103 PURAQ00577 322 aaKnown RBP16.51■□□□□ 0.23
SMARCD3-207ENST00000472103 UGCGQ16739 394 aa16.51■□□□□ 0.23
SMARCD3-207ENST00000472103 CXCL17Q6UXB2 119 aa16.51■□□□□ 0.23
SMARCD3-207ENST00000472103 MIER3Q7Z3K6 550 aa16.51■□□□□ 0.23
SMARCD3-207ENST00000472103 RNF180Q86T96 592 aa16.51■□□□□ 0.23
SMARCD3-207ENST00000472103 CCDC60Q8IWA6 550 aaPredicted RBP16.51■□□□□ 0.23
SMARCD3-207ENST00000472103 C16orf70Q9BSU1 422 aa16.51■□□□□ 0.23
SMARCD3-207ENST00000472103 SPC25Q9HBM1 224 aa16.51■□□□□ 0.23
SMARCD3-207ENST00000472103 GDPD2Q9HCC8 539 aa16.51■□□□□ 0.23
SMARCD3-207ENST00000472103 DISC1Q9NRI5 854 aa16.51■□□□□ 0.23
SMARCD3-207ENST00000472103 VWA3AA6NCI4 1184 aa16.5■□□□□ 0.23
SMARCD3-207ENST00000472103 LAD1O00515 517 aa16.5■□□□□ 0.23
SMARCD3-207ENST00000472103 LGR5O75473 907 aa16.5■□□□□ 0.23
SMARCD3-207ENST00000472103 YEATS4O95619 227 aa16.5■□□□□ 0.23
SMARCD3-207ENST00000472103 CDC25AP30304 524 aa16.5■□□□□ 0.23
SMARCD3-207ENST00000472103 FXR2P51116 673 aaKnown RBP eCLIP16.5■□□□□ 0.23
SMARCD3-207ENST00000472103 STK38Q15208 465 aa16.5■□□□□ 0.23
SMARCD3-207ENST00000472103 DGKDQ16760 1214 aa16.5■□□□□ 0.23
SMARCD3-207ENST00000472103 ARRDC4Q8NCT1 418 aa16.5■□□□□ 0.23
SMARCD3-207ENST00000472103 TNPO1Q92973 898 aaKnown RBP16.5■□□□□ 0.23
SMARCD3-207ENST00000472103 FERMT2Q96AC1 680 aa16.5■□□□□ 0.23
SMARCD3-207ENST00000472103 CLIC6Q96NY7 704 aa16.5■□□□□ 0.23
SMARCD3-207ENST00000472103 CEP131Q9UPN4 1083 aa16.5■□□□□ 0.23
SMARCD3-207ENST00000472103 PHF24Q9UPV7 400 aa16.5■□□□□ 0.23
SMARCD3-207ENST00000472103 SCN10AQ9Y5Y9 1956 aa16.49■□□□□ 0.23
SMARCD3-207ENST00000472103 CCDC85CA6NKD9 419 aa16.49■□□□□ 0.23
SMARCD3-207ENST00000472103 WDR64B1ANS9 1081 aa16.49■□□□□ 0.23
SMARCD3-207ENST00000472103 DNM1LO00429 736 aa16.49■□□□□ 0.23
SMARCD3-207ENST00000472103 SPTLC2O15270 562 aa16.49■□□□□ 0.23
SMARCD3-207ENST00000472103 PPFIA4O75335 1185 aa16.49■□□□□ 0.23
SMARCD3-207ENST00000472103 BMP15O95972 392 aa16.49■□□□□ 0.23
SMARCD3-207ENST00000472103 NCLP19338 710 aaKnown RBP16.49■□□□□ 0.23
SMARCD3-207ENST00000472103 ATP4AP20648 1035 aa16.49■□□□□ 0.23
SMARCD3-207ENST00000472103 ACLYP53396 1101 aa16.49■□□□□ 0.23
SMARCD3-207ENST00000472103 PSMC6P62333 389 aa16.49■□□□□ 0.23
SMARCD3-207ENST00000472103 EPHA7Q15375 998 aa16.49■□□□□ 0.23
SMARCD3-207ENST00000472103 SPECC1Q5M775 1068 aa16.49■□□□□ 0.23
SMARCD3-207ENST00000472103 ARL6IP4Q66PJ3 421 aaKnown RBP16.49■□□□□ 0.23
SMARCD3-207ENST00000472103 SWSAP1Q6NVH7 229 aa16.49■□□□□ 0.23
SMARCD3-207ENST00000472103 MIS18BP1Q6P0N0 1132 aa16.49■□□□□ 0.23
SMARCD3-207ENST00000472103 DTHD1Q6ZMT9 781 aa16.49■□□□□ 0.23
SMARCD3-207ENST00000472103 SMAP1Q8IYB5 467 aaPredicted RBP16.49■□□□□ 0.23
SMARCD3-207ENST00000472103 IGSF22Q8N9C0 903 aa16.49■□□□□ 0.23
SMARCD3-207ENST00000472103 BANK1Q8NDB2 785 aa16.49■□□□□ 0.23
SMARCD3-207ENST00000472103 DYDC2Q96IM9 177 aa16.49■□□□□ 0.23
SMARCD3-207ENST00000472103 TSEN34Q9BSV6 310 aaKnown RBP16.49■□□□□ 0.23
SMARCD3-207ENST00000472103 MMTAG2Q9BU76 263 aaKnown RBP16.49■□□□□ 0.23
SMARCD3-207ENST00000472103 RGL1Q9NZL6 768 aa16.49■□□□□ 0.23
SMARCD3-207ENST00000472103 WRAP73Q9P2S5 460 aaPredicted RBP16.49■□□□□ 0.23
SMARCD3-207ENST00000472103 GABBR1Q9UBS5 961 aa16.49■□□□□ 0.23
SMARCD3-207ENST00000472103 RCOR1Q9UKL0 485 aa16.49■□□□□ 0.23
SMARCD3-207ENST00000472103 SAMM50Q9Y512 469 aa16.49■□□□□ 0.23
SMARCD3-207ENST00000472103 PCDHA10Q9Y5I2 948 aa16.49■□□□□ 0.23
SMARCD3-207ENST00000472103 MORC2Q9Y6X9 1032 aaPredicted RBP16.49■□□□□ 0.23
SMARCD3-207ENST00000472103 GRIN2DO15399 1336 aa16.48■□□□□ 0.23
SMARCD3-207ENST00000472103 EMSYQ7Z589 1322 aa16.48■□□□□ 0.23
SMARCD3-207ENST00000472103 MYH9P35579 1960 aaKnown RBP16.48■□□□□ 0.23
SMARCD3-207ENST00000472103 A0A1W2PQ45 241 aaPredicted RBP16.48■□□□□ 0.23
SMARCD3-207ENST00000472103 A0A1W2PQY0 241 aa16.48■□□□□ 0.23
SMARCD3-207ENST00000472103 KBTBD13C9JR72 458 aa16.48■□□□□ 0.23
SMARCD3-207ENST00000472103 ZNF862O60290 1169 aa16.48■□□□□ 0.23
SMARCD3-207ENST00000472103 MED24O75448 989 aa16.48■□□□□ 0.23
SMARCD3-207ENST00000472103 PSAPP07602 524 aa16.48■□□□□ 0.23
SMARCD3-207ENST00000472103 MARK3P27448 753 aa16.48■□□□□ 0.23
SMARCD3-207ENST00000472103 SFNP31947 248 aa16.48■□□□□ 0.23
SMARCD3-207ENST00000472103 JAK3P52333 1124 aa16.48■□□□□ 0.23
SMARCD3-207ENST00000472103 KRT85P78386 507 aa16.48■□□□□ 0.23
SMARCD3-207ENST00000472103 CTTNQ14247 550 aaKnown RBP16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms