RNA–Protein interactions for RNA: ENST00000471880.5

SSR4-208, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 5

Gene SSR4, Length 785 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-208ENST00000471880 FAM109BQ6ICB4 259 aaPredicted RBP16.85■□□□□ 0.29
SSR4-208ENST00000471880 CAGE1Q8TC20 777 aa16.85■□□□□ 0.29
SSR4-208ENST00000471880 AZI2Q9H6S1 392 aa16.85■□□□□ 0.29
SSR4-208ENST00000471880 SETD4Q9NVD3 440 aa16.85■□□□□ 0.29
SSR4-208ENST00000471880 PITPNM1O00562 1244 aa16.84■□□□□ 0.29
SSR4-208ENST00000471880 PFKFB2O60825 505 aa16.84■□□□□ 0.29
SSR4-208ENST00000471880 IQCF3P0C7M6 154 aa16.84■□□□□ 0.29
SSR4-208ENST00000471880 ACTN1P12814 892 aa16.84■□□□□ 0.29
SSR4-208ENST00000471880 XBP1P17861 261 aa16.84■□□□□ 0.29
SSR4-208ENST00000471880 PRR16Q569H4 304 aa16.84■□□□□ 0.29
SSR4-208ENST00000471880 ZNF697Q5TEC3 545 aa16.84■□□□□ 0.29
SSR4-208ENST00000471880 LRRC8DQ7L1W4 858 aa16.84■□□□□ 0.29
SSR4-208ENST00000471880 AGO4Q9HCK5 861 aaKnown RBP16.84■□□□□ 0.29
SSR4-208ENST00000471880 SH3GLB2Q9NR46 395 aa16.84■□□□□ 0.29
SSR4-208ENST00000471880 PCDHA4Q9UN74 947 aa16.84■□□□□ 0.29
SSR4-208ENST00000471880 KCNJ14Q9UNX9 436 aa16.84■□□□□ 0.29
SSR4-208ENST00000471880 CDH23Q9H251 3354 aa16.84■□□□□ 0.29
SSR4-208ENST00000471880 GSTTP1A0A1W2PQM5 241 aa16.83■□□□□ 0.28
SSR4-208ENST00000471880 FAM86B1E9PN63 330 aa16.83■□□□□ 0.28
SSR4-208ENST00000471880 BACH1O14867 736 aa16.83■□□□□ 0.28
SSR4-208ENST00000471880 FAM86B2P0C5J1 330 aa16.83■□□□□ 0.28
SSR4-208ENST00000471880 GNAT1P11488 350 aa16.83■□□□□ 0.28
SSR4-208ENST00000471880 THPOP40225 353 aa16.83■□□□□ 0.28
SSR4-208ENST00000471880 IGBP1P78318 339 aa16.83■□□□□ 0.28
SSR4-208ENST00000471880 PTK7Q13308 1070 aa16.83■□□□□ 0.28
SSR4-208ENST00000471880 HIC1Q14526 733 aa16.83■□□□□ 0.28
SSR4-208ENST00000471880 C8orf34Q49A92 452 aa16.83■□□□□ 0.28
SSR4-208ENST00000471880 BLIDQ8IZY5 108 aa16.83■□□□□ 0.28
SSR4-208ENST00000471880 AFAP1L1Q8TED9 768 aa16.83■□□□□ 0.28
SSR4-208ENST00000471880 ZNF577Q9BSK1 485 aa16.83■□□□□ 0.28
SSR4-208ENST00000471880 RNPEPQ9H4A4 650 aa16.83■□□□□ 0.28
SSR4-208ENST00000471880 SMARCAD1Q9H4L7 1026 aa16.83■□□□□ 0.28
SSR4-208ENST00000471880 ORC3Q9UBD5 711 aaPredicted RBP16.83■□□□□ 0.28
SSR4-208ENST00000471880 TRPC6Q9Y210 931 aa16.83■□□□□ 0.28
SSR4-208ENST00000471880 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.82■□□□□ 0.28
SSR4-208ENST00000471880 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.82■□□□□ 0.28
SSR4-208ENST00000471880 GRXCR1A8MXD5 290 aa16.82■□□□□ 0.28
SSR4-208ENST00000471880 MEIS1O00470 390 aa16.82■□□□□ 0.28
SSR4-208ENST00000471880 TREHO43280 583 aa16.82■□□□□ 0.28
SSR4-208ENST00000471880 LARGE1O95461 756 aa16.82■□□□□ 0.28
SSR4-208ENST00000471880 CTSHP09668 335 aa16.82■□□□□ 0.28
SSR4-208ENST00000471880 CKBP12277 381 aa16.82■□□□□ 0.28
SSR4-208ENST00000471880 SELPP16109 830 aa16.82■□□□□ 0.28
SSR4-208ENST00000471880 RFC2P35250 354 aa16.82■□□□□ 0.28
SSR4-208ENST00000471880 ACTR2P61160 394 aa16.82■□□□□ 0.28
SSR4-208ENST00000471880 SMAD3P84022 425 aaKnown RBP16.82■□□□□ 0.28
SSR4-208ENST00000471880 SETQ01105 290 aaPredicted RBP16.82■□□□□ 0.28
SSR4-208ENST00000471880 PPFIA1Q13136 1202 aa16.82■□□□□ 0.28
SSR4-208ENST00000471880 ITGB3BPQ13352 177 aaPredicted RBP16.82■□□□□ 0.28
SSR4-208ENST00000471880 ME3Q16798 604 aa16.82■□□□□ 0.28
SSR4-208ENST00000471880 RASIP1Q5U651 963 aa16.82■□□□□ 0.28
SSR4-208ENST00000471880 GPR153Q6NV75 609 aa16.82■□□□□ 0.28
SSR4-208ENST00000471880 DHX38Q92620 1227 aaKnown RBP16.82■□□□□ 0.28
SSR4-208ENST00000471880 UPF2Q9HAU5 1272 aaKnown RBP16.82■□□□□ 0.28
SSR4-208ENST00000471880 MTMR10Q9NXD2 777 aa16.82■□□□□ 0.28
SSR4-208ENST00000471880 ERAP1Q9NZ08 941 aa16.82■□□□□ 0.28
SSR4-208ENST00000471880 CXXC1Q9P0U4 656 aaPredicted RBP16.82■□□□□ 0.28
SSR4-208ENST00000471880 SLC4A7Q9Y6M7 1214 aa16.82■□□□□ 0.28
SSR4-208ENST00000471880 SIP14410 1827 aa16.82■□□□□ 0.28
SSR4-208ENST00000471880 NFASCO94856 1347 aa16.81■□□□□ 0.28
SSR4-208ENST00000471880 IPO5O00410 1097 aaKnown RBP16.81■□□□□ 0.28
SSR4-208ENST00000471880 PFKMP08237 780 aa16.81■□□□□ 0.28
SSR4-208ENST00000471880 CYP3A4P08684 503 aa16.81■□□□□ 0.28
SSR4-208ENST00000471880 NIPA1Q7RTP0 329 aa16.81■□□□□ 0.28
SSR4-208ENST00000471880 TRMT1LQ7Z2T5 733 aaKnown RBP16.81■□□□□ 0.28
SSR4-208ENST00000471880 TBCKQ8TEA7 893 aa16.81■□□□□ 0.28
SSR4-208ENST00000471880 HERVK_113Q902F9 699 aa16.81■□□□□ 0.28
SSR4-208ENST00000471880 WASF1Q92558 559 aa16.81■□□□□ 0.28
SSR4-208ENST00000471880 C22orf23Q9BZE7 217 aa16.81■□□□□ 0.28
SSR4-208ENST00000471880 SAMM50Q9Y512 469 aa16.81■□□□□ 0.28
SSR4-208ENST00000471880 LOXHD1Q8IVV2 1947 aa16.8■□□□□ 0.28
SSR4-208ENST00000471880 STK36Q9NRP7 1315 aa16.8■□□□□ 0.28
SSR4-208ENST00000471880 CCDC194A0A1B0GVG4 234 aa16.8■□□□□ 0.28
SSR4-208ENST00000471880 ZNF618Q5T7W0 954 aa16.8■□□□□ 0.28
SSR4-208ENST00000471880 CKAP2LQ8IYA6 745 aa16.8■□□□□ 0.28
SSR4-208ENST00000471880 LMBR1Q8WVP7 490 aa16.8■□□□□ 0.28
SSR4-208ENST00000471880 WNT8BQ93098 351 aa16.8■□□□□ 0.28
SSR4-208ENST00000471880 GTF3C6Q969F1 213 aa16.8■□□□□ 0.28
SSR4-208ENST00000471880 GUCD1Q96NT3 240 aa16.8■□□□□ 0.28
SSR4-208ENST00000471880 TTYH1Q9H313 450 aaPredicted RBP16.8■□□□□ 0.28
SSR4-208ENST00000471880 GJB4Q9NTQ9 266 aa16.8■□□□□ 0.28
SSR4-208ENST00000471880 CHD9Q3L8U1 2897 aa16.8■□□□□ 0.28
SSR4-208ENST00000471880 IGLV3-22A0A075B6J6 115 aa16.79■□□□□ 0.28
SSR4-208ENST00000471880 CHMP2AO43633 222 aa16.79■□□□□ 0.28
SSR4-208ENST00000471880 DNAJB2P25686 324 aa16.79■□□□□ 0.28
SSR4-208ENST00000471880 KCNJ6P48051 423 aa16.79■□□□□ 0.28
SSR4-208ENST00000471880 GPNMBQ14956 572 aa16.79■□□□□ 0.28
SSR4-208ENST00000471880 NONOQ15233 471 aaKnown RBP eCLIP16.79■□□□□ 0.28
SSR4-208ENST00000471880 GRIK4Q16099 956 aa16.79■□□□□ 0.28
SSR4-208ENST00000471880 FAM160B1Q5W0V3 765 aa16.79■□□□□ 0.28
SSR4-208ENST00000471880 MIS18BP1Q6P0N0 1132 aa16.79■□□□□ 0.28
SSR4-208ENST00000471880 SERINC5Q86VE9 423 aa16.79■□□□□ 0.28
SSR4-208ENST00000471880 MSRAQ9UJ68 235 aa16.79■□□□□ 0.28
SSR4-208ENST00000471880 EMSYQ7Z589 1322 aa16.78■□□□□ 0.28
SSR4-208ENST00000471880 NRCAMQ92823 1304 aa16.78■□□□□ 0.28
SSR4-208ENST00000471880 RSPH10B2B2RC85 870 aa16.78■□□□□ 0.28
SSR4-208ENST00000471880 CTDNEP1O95476 244 aa16.78■□□□□ 0.28
SSR4-208ENST00000471880 RSPH10BP0C881 870 aa16.78■□□□□ 0.28
SSR4-208ENST00000471880 PBX2P40425 430 aa16.78■□□□□ 0.28
SSR4-208ENST00000471880 STAT5BP51692 787 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms