RNA–Protein interactions for RNA: ENST00000471862.1

COL4A3-205, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 5

Gene COL4A3, Length 755 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-205ENST00000471862 ATP6V0A1Q93050 837 aa13.19□□□□□ -0.3
COL4A3-205ENST00000471862 MXRA8Q9BRK3 442 aa13.19□□□□□ -0.3
COL4A3-205ENST00000471862 GLT8D2Q9H1C3 349 aa13.19□□□□□ -0.3
COL4A3-205ENST00000471862 PRDM12Q9H4Q4 367 aa13.19□□□□□ -0.3
COL4A3-205ENST00000471862 SLC28A3Q9HAS3 691 aa13.19□□□□□ -0.3
COL4A3-205ENST00000471862 ZNF215Q9UL58 517 aaPredicted RBP13.19□□□□□ -0.3
COL4A3-205ENST00000471862 RBAK-RBAKDNI3L0D1 243 aa13.18□□□□□ -0.3
COL4A3-205ENST00000471862 ADAMTS3O15072 1205 aa13.18□□□□□ -0.3
COL4A3-205ENST00000471862 PRPF3O43395 683 aaKnown RBP13.18□□□□□ -0.3
COL4A3-205ENST00000471862 FGD1P98174 961 aa13.18□□□□□ -0.3
COL4A3-205ENST00000471862 MKRN4PQ13434 485 aaPredicted RBP13.18□□□□□ -0.3
COL4A3-205ENST00000471862 ADGRE1Q14246 886 aa13.18□□□□□ -0.3
COL4A3-205ENST00000471862 HERC6Q8IVU3 1022 aa13.18□□□□□ -0.3
COL4A3-205ENST00000471862 CYP2W1Q8TAV3 490 aa13.18□□□□□ -0.3
COL4A3-205ENST00000471862 CRYGNQ8WXF5 182 aa13.18□□□□□ -0.3
COL4A3-205ENST00000471862 SEPT1Q8WYJ6 367 aa13.18□□□□□ -0.3
COL4A3-205ENST00000471862 ZSWIM6Q9HCJ5 1215 aa13.18□□□□□ -0.3
COL4A3-205ENST00000471862 SETD4Q9NVD3 440 aa13.18□□□□□ -0.3
COL4A3-205ENST00000471862 TMEM260Q9NX78 707 aa13.18□□□□□ -0.3
COL4A3-205ENST00000471862 NAP1L2Q9ULW6 460 aaPredicted RBP13.18□□□□□ -0.3
COL4A3-205ENST00000471862 NFASCO94856 1347 aa13.17□□□□□ -0.3
COL4A3-205ENST00000471862 EMSYQ7Z589 1322 aa13.17□□□□□ -0.3
COL4A3-205ENST00000471862 MEIS1O00470 390 aa13.17□□□□□ -0.3
COL4A3-205ENST00000471862 CAND2O75155 1236 aa13.17□□□□□ -0.3
COL4A3-205ENST00000471862 LGR5O75473 907 aa13.17□□□□□ -0.3
COL4A3-205ENST00000471862 ARHGEF15O94989 841 aa13.17□□□□□ -0.3
COL4A3-205ENST00000471862 ARP10275 920 aa13.17□□□□□ -0.3
COL4A3-205ENST00000471862 GNAT1P11488 350 aa13.17□□□□□ -0.3
COL4A3-205ENST00000471862 IFNAR1P17181 557 aa13.17□□□□□ -0.3
COL4A3-205ENST00000471862 PDIA3P30101 505 aaKnown RBP13.17□□□□□ -0.3
COL4A3-205ENST00000471862 DEFB103AP81534 67 aa13.17□□□□□ -0.3
COL4A3-205ENST00000471862 TOB2Q14106 344 aaPredicted RBP13.17□□□□□ -0.3
COL4A3-205ENST00000471862 CEP55Q53EZ4 464 aa13.17□□□□□ -0.3
COL4A3-205ENST00000471862 PPP2R2DQ66LE6 453 aa13.17□□□□□ -0.3
COL4A3-205ENST00000471862 RUFY3Q7L099 469 aa13.17□□□□□ -0.3
COL4A3-205ENST00000471862 USP38Q8NB14 1042 aa13.17□□□□□ -0.3
COL4A3-205ENST00000471862 LMBR1Q8WVP7 490 aa13.17□□□□□ -0.3
COL4A3-205ENST00000471862 PCYT2Q99447 389 aa13.17□□□□□ -0.3
COL4A3-205ENST00000471862 GAS2L1Q99501 681 aaPredicted RBP13.17□□□□□ -0.3
COL4A3-205ENST00000471862 TM6SF1Q9BZW5 370 aa13.17□□□□□ -0.3
COL4A3-205ENST00000471862 ZMYND12Q9H0C1 365 aa13.17□□□□□ -0.3
COL4A3-205ENST00000471862 KCNH7Q9NS40 1196 aa13.17□□□□□ -0.3
COL4A3-205ENST00000471862 PPP4R2Q9NY27 417 aa13.17□□□□□ -0.3
COL4A3-205ENST00000471862 PKD2L1Q9P0L9 805 aa13.17□□□□□ -0.3
COL4A3-205ENST00000471862 NRCAMQ92823 1304 aa13.16□□□□□ -0.3
COL4A3-205ENST00000471862 ABHD14A-ACY1A0A1B0GW23 586 aa13.16□□□□□ -0.3
COL4A3-205ENST00000471862 RSPH10B2B2RC85 870 aa13.16□□□□□ -0.3
COL4A3-205ENST00000471862 CA3P07451 260 aa13.16□□□□□ -0.3
COL4A3-205ENST00000471862 RSPH10BP0C881 870 aa13.16□□□□□ -0.3
COL4A3-205ENST00000471862 THPOP40225 353 aa13.16□□□□□ -0.3
COL4A3-205ENST00000471862 KCNJ6P48051 423 aa13.16□□□□□ -0.3
COL4A3-205ENST00000471862 ARHGAP4P98171 946 aa13.16□□□□□ -0.3
COL4A3-205ENST00000471862 ITGB3BPQ13352 177 aaPredicted RBP13.16□□□□□ -0.3
COL4A3-205ENST00000471862 PLEKHG4Q58EX7 1191 aa13.16□□□□□ -0.3
COL4A3-205ENST00000471862 FAM26DQ5JW98 314 aa13.16□□□□□ -0.3
COL4A3-205ENST00000471862 ERICH6BQ5W0A0 696 aa13.16□□□□□ -0.3
COL4A3-205ENST00000471862 NIPA1Q7RTP0 329 aa13.16□□□□□ -0.3
COL4A3-205ENST00000471862 RPAINQ86UA6 219 aa13.16□□□□□ -0.3
COL4A3-205ENST00000471862 PHKBQ93100 1093 aa13.16□□□□□ -0.3
COL4A3-205ENST00000471862 RNF26Q9BY78 433 aaPredicted RBP13.16□□□□□ -0.3
COL4A3-205ENST00000471862 OSBPL7Q9BZF2 842 aa13.16□□□□□ -0.3
COL4A3-205ENST00000471862 AGO4Q9HCK5 861 aaKnown RBP13.16□□□□□ -0.3
COL4A3-205ENST00000471862 JPH1Q9HDC5 661 aaPredicted RBP13.16□□□□□ -0.3
COL4A3-205ENST00000471862 ERAP1Q9NZ08 941 aa13.16□□□□□ -0.3
COL4A3-205ENST00000471862 SLC9A2Q9UBY0 812 aa13.16□□□□□ -0.3
COL4A3-205ENST00000471862 IGLV3-22A0A075B6J6 115 aa13.15□□□□□ -0.3
COL4A3-205ENST00000471862 MBLAC1A4D2B0 266 aaPredicted RBP13.15□□□□□ -0.3
COL4A3-205ENST00000471862 EFCAB14O75071 495 aa13.15□□□□□ -0.3
COL4A3-205ENST00000471862 ATG7O95352 703 aa13.15□□□□□ -0.3
COL4A3-205ENST00000471862 CYP3A4P08684 503 aa13.15□□□□□ -0.3
COL4A3-205ENST00000471862 JAKMIP3Q5VZ66 844 aa13.15□□□□□ -0.3
COL4A3-205ENST00000471862 DBF4BQ8NFT6 615 aa13.15□□□□□ -0.3
COL4A3-205ENST00000471862 SMARCAD1Q9H4L7 1026 aa13.15□□□□□ -0.3
COL4A3-205ENST00000471862 TRANK1O15050 2925 aa13.15□□□□□ -0.3
COL4A3-205ENST00000471862 CUL9Q8IWT3 2517 aa13.14□□□□□ -0.31
COL4A3-205ENST00000471862 WDR81Q562E7 1941 aa13.14□□□□□ -0.31
COL4A3-205ENST00000471862 FAM86B1E9PN63 330 aa13.14□□□□□ -0.31
COL4A3-205ENST00000471862 DLL1O00548 723 aa13.14□□□□□ -0.31
COL4A3-205ENST00000471862 GJB5O95377 273 aa13.14□□□□□ -0.31
COL4A3-205ENST00000471862 FAM86B2P0C5J1 330 aa13.14□□□□□ -0.31
COL4A3-205ENST00000471862 MARK3P27448 753 aa13.14□□□□□ -0.31
COL4A3-205ENST00000471862 ACTR2P61160 394 aa13.14□□□□□ -0.31
COL4A3-205ENST00000471862 CCT2P78371 535 aaKnown RBP13.14□□□□□ -0.31
COL4A3-205ENST00000471862 TAP1Q03518 808 aa13.14□□□□□ -0.31
COL4A3-205ENST00000471862 MGAT3Q09327 533 aa13.14□□□□□ -0.31
COL4A3-205ENST00000471862 PPFIA1Q13136 1202 aa13.14□□□□□ -0.31
COL4A3-205ENST00000471862 IKBKEQ14164 716 aa13.14□□□□□ -0.31
COL4A3-205ENST00000471862 GRIK4Q16099 956 aa13.14□□□□□ -0.31
COL4A3-205ENST00000471862 MARCH8Q5T0T0 291 aa13.14□□□□□ -0.31
COL4A3-205ENST00000471862 MCTP2Q6DN12 878 aa13.14□□□□□ -0.31
COL4A3-205ENST00000471862 TMCO2Q7Z6W1 182 aaPredicted RBP13.14□□□□□ -0.31
COL4A3-205ENST00000471862 CCDC12Q8WUD4 166 aaPredicted RBP13.14□□□□□ -0.31
COL4A3-205ENST00000471862 SDF4Q9BRK5 362 aa13.14□□□□□ -0.31
COL4A3-205ENST00000471862 NCOA5Q9HCD5 579 aaKnown RBP13.14□□□□□ -0.31
COL4A3-205ENST00000471862 C6orf50Q9HD87 102 aa13.14□□□□□ -0.31
COL4A3-205ENST00000471862 SPTBN5Q9NRC6 3674 aaKnown RBP13.14□□□□□ -0.31
COL4A3-205ENST00000471862 COL4A4P53420 1690 aaPredicted RBP13.14□□□□□ -0.31
COL4A3-205ENST00000471862 PRRC2BQ5JSZ5 2229 aaKnown RBP13.13□□□□□ -0.31
COL4A3-205ENST00000471862 VCANP13611 3396 aa13.13□□□□□ -0.31
COL4A3-205ENST00000471862 IGKV6D-21A0A0A0MT36 114 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms